Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35348 Davidia involucrata HOM05D008056 ORTHO05D009804 1.5e-37 159.1 84 100.0
Hma1.2p1_0591F.1_g185220 Hydrangea macrophylla HOM05D008056 ORTHO05D009804 1.5e-21 105.9 84 66.7
Dinv29260 Davidia involucrata HOM05D008056 ORTHO05D009804 4.4e-21 104.4 83 74.7
Actinidia34234 Actinidia chinensis HOM05D008056 ORTHO05D009804 7.5e-21 103.6 84 65.5
Actinidia08668 Actinidia chinensis HOM05D008056 ORTHO05D009804 2.2e-20 102.1 84 64.3
Cc02_g01320 Coffea canephora HOM05D008056 ORTHO05D009804 1.5e-16 89.4 85 60.0
Rhsim03G0210900 Rhododendron simsii HOM05D008056 ORTHO05D009804 3.6e-15 84.7 82 56.1
GSVIVG01038573001 Vitis vinifera HOM05D008056 ORTHO05D009804 2.4e-14 82.0 55 67.3
Hma1.2p1_2994F.1_g331390 Hydrangea macrophylla HOM05D008056 ORTHO05D009804 8.9e-14 80.1 84 58.3
Haze_00233 Corylus avellana HOM05D008056 ORTHO05D009804 2.0e-13 79.0 84 53.6
TAR629G0325 Trochodendron aralioides HOM05D008056 ORTHO05D009804 7.6e-13 77.0 86 57.0
vmacro06398 Vaccinium macrocarpon HOM05D008056 ORTHO05D009804 7.6e-13 77.0 84 52.4
Rhsim09G0206700 Rhododendron simsii HOM05D008056 ORTHO05D009804 8.4e-12 73.6 85 55.3
CAN.G312.7 Capsicum annuum HOM05D008056 ORTHO05D009804 2.4e-11 72.0 75 54.7
Glyma.04G233800 Glycine max HOM05D008056 ORTHO05D009804 7.1e-11 70.5 75 52.0
Solyc06g052020.2 Solanum lycopersicum HOM05D008056 ORTHO05D009804 7.1e-11 70.5 75 54.7
ECA232G3962 Erigeron canadensis HOM05D008056 ORTHO05D009804 9.2e-11 70.1 80 51.2
Oeu060999.1 Olea europaea HOM05D008056 ORTHO05D009804 1.2e-10 69.7 64 62.5
Peaxi162Scf00740g00228 Petunia axillaris HOM05D008056 ORTHO05D009804 1.2e-10 69.7 57 59.6
TWI39G0847 Tripterygium wilfordii HOM05D008056 ORTHO05D009804 1.2e-10 69.7 86 53.5
Atru.chr12.2248 Acer truncatum HOM05D008056 ORTHO05D009804 1.6e-10 69.3 83 51.8
Lsat_1_v5_gn_9_49881 Lactuca sativa HOM05D008056 ORTHO05D009804 2.1e-10 68.9 79 49.4
Ciclev10023143m.g Citrus clementina HOM05D008056 ORTHO05D009804 3.5e-10 68.2 77 51.9
Nitab4.5_0000548g0010 Nicotiana tabacum HOM05D008056 ORTHO05D009804 3.5e-10 68.2 70 50.0
Potri.012G017400 Populus trichocarpa HOM05D008056 ORTHO05D009804 3.5e-10 68.2 64 59.4
Sopen06g018070 Solanum pennellii HOM05D008056 ORTHO05D009804 4.6e-10 67.8 75 53.3
Migut.F01018 Erythranthe guttata HOM05D008056 ORTHO05D009804 7.8e-10 67.0 52 65.4
CiPaw.06G044900 Carya illinoinensis HOM05D008056 ORTHO05D009804 1.0e-09 66.6 85 51.8
SalBow2G0413 Salvia bowleyana HOM05D008056 ORTHO05D009804 1.0e-09 66.6 48 70.8
PGSC0003DMG400019598 Solanum tuberosum HOM05D008056 ORTHO05D009804 2.3e-09 65.5 72 54.2
Nitab4.5_0005491g0040 Nicotiana tabacum HOM05D008056 ORTHO05D009804 3.0e-09 65.1 70 50.0
Migut.F00196 Erythranthe guttata HOM05D008056 ORTHO05D009804 3.9e-09 64.7 86 46.5
DCAR_008952 Daucus carota HOM05D008056 ORTHO05D009804 8.7e-09 63.5 85 49.4
CiPaw.05G198700 Carya illinoinensis HOM05D008056 ORTHO05D009804 1.1e-08 63.2 89 46.1
Glyma.06G131000 Glycine max HOM05D008056 ORTHO05D009804 1.1e-08 63.2 75 49.3
Nn5g27570 Nelumbo nucifera HOM05D008056 ORTHO05D009804 1.1e-08 63.2 85 48.2
Oeu041070.2 Olea europaea HOM05D008056 ORTHO05D009804 1.9e-08 62.4 103 40.8
QL09p007938 Quercus lobata HOM05D008056 ORTHO05D009804 1.9e-08 62.4 76 48.7
MD01G1223300 Malus domestica HOM05D015219 ORTHO05D009804 2.5e-08 62.0 90 52.2
Prupe.2G313800 Prunus persica HOM05D015219 ORTHO05D009804 4.3e-08 61.2 90 51.1
Sabra12G0015100 Salix brachista HOM05D008056 ORTHO05D009804 4.3e-08 61.2 83 50.6
Sopen03g022760 Solanum pennellii HOM05D008056 ORTHO05D009804 4.3e-08 61.2 78 47.4
Solyc03g082945.1 Solanum lycopersicum HOM05D008056 ORTHO05D009804 5.6e-08 60.8 78 46.2
Cpa.g.sc3.104 Carica papaya HOM05D008056 ORTHO05D009804 7.3e-08 60.5 80 47.5
HanXRQChr09g0237881 Helianthus annuus HOM05D008056 ORTHO05D009804 7.3e-08 60.5 58 53.4
TPR.G33657 Trifolium pratense HOM05D008056 ORTHO05D009804 1.2e-07 59.7 67 49.3
CSS0012223 Camellia sinensis var. sinensis HOM05D008056 ORTHO05D009804 1.6e-07 59.3 67 50.7
HanXRQChr15g0485651 Helianthus annuus HOM05D008056 ORTHO05D009804 1.6e-07 59.3 60 51.7
Phvul.009G050700 Phaseolus vulgaris HOM05D008056 ORTHO05D009804 2.8e-07 58.5 76 43.4
GSVIVG01029691001 Vitis vinifera HOM05D008056 ORTHO05D009804 2.8e-07 58.5 84 46.4
Ciclev10023135m.g Citrus clementina HOM05D008056 ORTHO05D009804 3.6e-07 58.2 79 46.8
PSO384G0355 Papaver somniferum HOM05D028282 ORTHO05D009804 3.6e-07 58.2 79 48.1
PGSC0003DMG400018526 Solanum tuberosum HOM05D008056 ORTHO05D009804 3.6e-07 58.2 78 43.6
Medtr3g491850 Medicago truncatula HOM05D008056 ORTHO05D009804 4.7e-07 57.8 68 45.6
RcHm_v2.0_Chr1g0381651 Rosa chinensis HOM05D015219 ORTHO05D009804 4.7e-07 57.8 71 54.9
Sc13g0010000 Simmondsia chinensis HOM05D008056 ORTHO05D009804 4.7e-07 57.8 77 41.6
MD07G1294000 Malus domestica HOM05D015219 ORTHO05D009804 8.1e-07 57.0 90 46.7
Aqoxy7G00057 Aquilegia oxysepala HOM05D008056 ORTHO05D009804 1.1e-06 56.6 64 46.9
DCAR_010591 Daucus carota HOM05D008056 ORTHO05D009804 1.4e-06 56.2 58 48.3
FAN10G1162 Fragaria x ananassa HOM05D015219 ORTHO05D009804 1.8e-06 55.8 68 52.9
FAN10G2686 Fragaria x ananassa HOM05D015219 ORTHO05D009804 1.8e-06 55.8 68 52.9
MBI07_g12799_MAGBIO Magnolia biondii HOM05D008056 ORTHO05D026555 1.8e-06 55.8 46 58.7
PSO135G1044 Papaver somniferum HOM05D028282 ORTHO05D009804 1.8e-06 55.8 80 41.2
Hund21013 Selenicereus undatus HOM05D008056 ORTHO05D009804 1.8e-06 55.8 91 40.7
FvH4_7g32040 Fragaria vesca HOM05D015219 ORTHO05D009804 2.4e-06 55.5 69 55.1
FAN01G0727 Fragaria x ananassa HOM05D015219 ORTHO05D009804 2.4e-06 55.5 69 55.1
FAN06G1964 Fragaria x ananassa HOM05D015219 ORTHO05D009804 2.4e-06 55.5 69 55.1
Nn1g00316 Nelumbo nucifera HOM05D028282 ORTHO05D009804 2.4e-06 55.5 41 70.7
CiPaw.12G080400 Carya illinoinensis HOM05D010963 ORTHO05D013297 4.0e-06 54.7 76 42.1
Hund11643 Selenicereus undatus HOM05D001108 ORTHO05D001619 4.0e-06 54.7 57 57.9
Thecc.03G201500 Theobroma cacao HOM05D015444 ORTHO05D009804 5.2e-06 54.3 57 52.6
TAR636G3368 Trochodendron aralioides HOM05D008056 ORTHO05D414590 6.9e-06 53.9 45 64.4


User provided reference genes

Program Settings