Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35243 Davidia involucrata HOM05D006627 ORTHO05D007753 1.1e-289 999.2 499 100.0
Dinv28394 Davidia involucrata HOM05D006627 ORTHO05D007753 8.1e-163 577.8 528 63.4
CSS0035854 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 1.7e-91 340.9 509 44.6
CSS0044230 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 1.7e-91 340.9 509 44.6
Lj1C1004T5 Lonicera japonica HOM05D006627 ORTHO05D007753 8.0e-86 322.0 543 40.9
GSVIVG01028875001 Vitis vinifera HOM05D006627 ORTHO05D007753 3.4e-68 263.5 595 36.5
Actinidia03134 Actinidia chinensis HOM05D006627 ORTHO05D007753 2.1e-62 244.2 508 38.2
Actinidia31835 Actinidia chinensis HOM05D006627 ORTHO05D007753 3.2e-58 230.3 510 36.3
Rhsim03G0190100 Rhododendron simsii HOM05D006627 ORTHO05D007753 2.7e-57 227.3 506 37.4
Rhsim07G0129200 Rhododendron simsii HOM05D006627 ORTHO05D007753 3.1e-53 213.8 506 36.0
Rhsim07G0129400 Rhododendron simsii HOM05D006627 ORTHO05D007753 6.4e-51 206.1 528 35.0
vmacro06637 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 2.7e-49 200.7 528 33.5
Actinidia34148 Actinidia chinensis HOM05D001410 ORTHO05D007753 4.6e-49 199.9 469 35.4
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 2.5e-47 194.1 606 32.3
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 1.6e-46 191.4 632 30.4
Cc02_g02490 Coffea canephora HOM05D006627 ORTHO05D007753 4.8e-46 189.9 524 33.6
TAR374G1318 Trochodendron aralioides HOM05D006627 ORTHO05D007753 6.2e-46 189.5 557 32.3
vmacro06638 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 2.2e-43 181.0 525 33.0
Duzib205G1471 Durio zibethinus HOM05D006627 ORTHO05D007753 1.9e-39 167.9 515 32.0
Potri.004G079000 Populus trichocarpa HOM05D006627 ORTHO05D007753 2.1e-38 164.5 521 33.2
Thecc.03G182600 Theobroma cacao HOM05D006627 ORTHO05D007753 2.1e-38 164.5 521 30.7
DCAR_020266 Daucus carota HOM05D006627 ORTHO05D007753 9.9e-36 155.6 547 30.0
Nn1g01606 Nelumbo nucifera HOM05D006627 ORTHO05D007753 6.4e-35 152.9 435 32.0
Duzib084G0535 Durio zibethinus HOM05D006627 ORTHO05D007753 1.1e-34 152.1 523 29.8
Hma1.2p1_0327F.1_g126380 Hydrangea macrophylla HOM05D006627 ORTHO05D007753 3.2e-34 150.6 230 43.9
Prupe.2G299600 Prunus persica HOM05D006627 ORTHO05D007753 4.2e-34 150.2 534 30.9
TWI23G0587 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 6.0e-33 146.4 391 33.2
Potri.017G142600 Populus trichocarpa HOM05D006627 ORTHO05D007753 7.9e-33 146.0 517 30.9
Sabra04G0052500 Salix brachista HOM05D006627 ORTHO05D007753 1.0e-32 145.6 520 31.9
DCAR_009389 Daucus carota HOM05D006627 ORTHO05D007753 8.7e-32 142.5 532 28.9
TWI14G0178 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 4.3e-31 140.2 311 36.7
Oeu060456.3 Olea europaea HOM05D006627 ORTHO05D007753 8.1e-30 136.0 388 32.7
Dinv38916 Davidia involucrata HOM05D006627 ORTHO05D007753 1.1e-29 135.6 536 28.0
Atru.chr1.386 Acer truncatum HOM05D006627 ORTHO05D007753 4.0e-29 133.7 504 29.8
COL.COLO4_28015 Corchorus olitorius HOM05D006627 ORTHO05D007753 2.0e-28 131.3 520 28.5
Sabra17G0119400 Salix brachista HOM05D001410 ORTHO05D006840 7.6e-28 129.4 522 30.7
Atru.chr1.369 Acer truncatum HOM05D006627 ORTHO05D007753 3.8e-27 127.1 504 29.6
Atru.ctg97_1.2 Acer truncatum HOM05D006627 ORTHO05D007753 3.8e-27 127.1 504 29.6
Ciclev10004200m.g Citrus clementina HOM05D006627 ORTHO05D007753 1.1e-26 125.6 525 28.8
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 3.2e-26 124.0 433 30.7
GSVIVG01019397001 Vitis vinifera HOM05D006627 ORTHO05D007753 7.1e-26 122.9 569 25.3
Peaxi162Scf00444g00008 Petunia axillaris HOM05D006627 ORTHO05D007753 2.7e-25 120.9 450 30.7
CAN.G236.7 Capsicum annuum HOM05D006627 ORTHO05D007753 6.0e-25 119.8 408 30.4
MBI04_g35056_MAGBIO Magnolia biondii HOM05D006627 ORTHO05D007753 4.3e-23 113.6 578 25.4
MD07G1277900 Malus domestica HOM05D006627 ORTHO05D007753 4.3e-23 113.6 515 25.8
Solyc03g025150.4 Solanum lycopersicum HOM05D006627 ORTHO05D007753 2.8e-22 110.9 391 28.4
MD01G1207000 Malus domestica HOM05D006627 ORTHO05D007753 3.7e-22 110.5 520 28.1
Dinv37613 Davidia involucrata HOM05D006627 ORTHO05D007753 3.1e-21 107.5 329 29.5
Peaxi162Scf00618g00717 Petunia axillaris HOM05D006627 ORTHO05D007753 3.1e-21 107.5 471 28.0
PGSC0003DMG400010123 Solanum tuberosum HOM05D006627 ORTHO05D007753 1.2e-20 105.5 552 25.7
SalBow4G0794 Salvia bowleyana HOM05D006627 ORTHO05D007753 1.5e-20 105.1 512 28.3
Sopen03g004000 Solanum pennellii HOM05D006627 ORTHO05D007753 2.6e-20 104.4 389 28.3
Cfa012198 Carpinus fangiana HOM05D006627 ORTHO05D007753 2.9e-19 100.9 656 23.8
Haze_00034 Corylus avellana HOM05D006627 ORTHO05D007753 1.4e-18 98.6 508 26.8
Haze_08819 Corylus avellana HOM05D006627 ORTHO05D007753 1.9e-18 98.2 651 23.8
MSTRG.27091 Avicennia marina HOM05D006627 ORTHO05D007753 5.5e-18 96.7 500 28.4
MSTRG.8718 Avicennia marina HOM05D006627 ORTHO05D007753 6.1e-17 93.2 370 28.6
RcHm_v2.0_Chr1g0378101 Rosa chinensis HOM05D006627 ORTHO05D007753 8.7e-16 89.4 529 25.9
FAN10G1026 Fragaria x ananassa HOM05D006627 ORTHO05D007753 3.7e-14 84.0 531 27.1
FvH4_7g30110 Fragaria vesca HOM05D006627 ORTHO05D007753 8.2e-14 82.8 508 26.8
FAN01G2627 Fragaria x ananassa HOM05D006627 ORTHO05D007753 8.2e-14 82.8 530 27.7
FAN06G3804 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.4e-13 82.0 508 26.8
ECA232G3189 Erigeron canadensis HOM05D006627 ORTHO05D007753 1.8e-13 81.6 390 29.5
FAN03G1328 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.8e-13 81.6 508 26.8
FAN06G3118 Fragaria x ananassa HOM05D006627 ORTHO05D007753 3.1e-13 80.9 508 26.6
FAN10G1355 Fragaria x ananassa HOM05D006627 ORTHO05D007753 4.1e-13 80.5 530 27.0
Cpa.g.sc107.97 Carica papaya HOM05D006627 ORTHO05D007753 2.0e-12 78.2 243 31.3
FAN03G3330 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.6e-12 77.8 508 26.4
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 5.9e-12 76.6 225 32.4
QL12p032277 Quercus lobata HOM05D006627 ORTHO05D007753 2.9e-11 74.3 552 24.1
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 5.0e-11 73.6 150 36.0
Migut.F00307 Erythranthe guttata HOM05D006627 ORTHO05D007753 2.5e-10 71.2 331 27.5
Gohir.A10G234800 Gossypium hirsutum HOM05D006627 ORTHO05D007753 2.5e-10 71.2 221 33.5
Lsat_1_v5_gn_9_57440 Lactuca sativa HOM05D006627 ORTHO05D007753 2.5e-10 71.2 194 32.0
HanXRQChr09g0252481 Helianthus annuus HOM05D029832 ORTHO05D007753 7.2e-10 69.7 226 31.9
Gorai.011G285600 Gossypium raimondii HOM05D006627 ORTHO05D007753 1.6e-09 68.6 220 32.7
Gohir.D10G247200 Gossypium hirsutum HOM05D006627 ORTHO05D007753 2.1e-09 68.2 221 33.5
DCAR_010663 Daucus carota HOM05D006627 ORTHO05D007753 2.3e-08 64.7 68 48.5
Actinidia28362 Actinidia chinensis HOM05D006627 ORTHO05D007753 3.0e-08 64.3 609 22.8
Sp7g23680 Schrenkiella parvula HOM05D008661 ORTHO05D010872 2.6e-07 61.2 193 34.7
BcaB03g12481 Brassica carinata HOM05D008661 ORTHO05D010872 5.7e-07 60.1 400 24.2
THA.LOC104811963 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 6.3e-06 56.6 211 35.1
CARHR233070 Cardamine hirsuta HOM05D008661 ORTHO05D010872 8.2e-06 56.2 193 33.7
AUR62010719 Chenopodium quinoa HOM05D006627 ORTHO05D007753 8.2e-06 56.2 145 29.0


User provided reference genes

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