Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 2.4e-298 1028.1 538 100.0
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 2.7e-241 838.6 523 83.6
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 2.4e-200 702.6 522 71.6
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 1.1e-186 657.1 519 68.6
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 1.3e-182 643.7 538 66.7
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 1.3e-182 643.7 528 67.2
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 5.6e-178 628.2 540 65.2
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 6.5e-174 614.8 536 64.4
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 3.8e-158 562.4 513 62.8
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 7.9e-156 554.7 523 61.6
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 3.0e-155 552.7 521 59.3
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 2.0e-154 550.1 542 58.9
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.8e-153 546.2 559 56.2
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 5.9e-151 538.5 523 58.7
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 1.4e-149 533.9 524 57.4
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 9.4e-149 531.2 517 57.8
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 1.6e-148 530.4 531 57.1
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.3e-147 526.6 514 60.3
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 8.8e-147 524.6 514 60.3
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 5.7e-146 521.9 523 58.1
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 9.7e-146 521.2 527 58.8
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 8.2e-145 518.1 522 59.0
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 5.3e-144 515.4 529 57.1
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 9.1e-144 514.6 522 59.2
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 2.0e-143 513.5 522 57.3
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 8.5e-142 508.1 525 56.2
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 8.5e-142 508.1 528 58.1
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 2.5e-141 506.5 514 57.6
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 2.1e-140 503.4 522 55.9
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 8.0e-140 501.5 524 56.1
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 3.9e-139 499.2 481 60.9
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.1e-138 497.7 522 57.3
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 1.4e-136 490.7 519 54.3
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 3.1e-136 489.6 536 54.5
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 4.1e-136 489.2 525 55.2
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 9.1e-136 488.0 502 59.8
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 1.6e-135 487.3 524 54.2
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 6.5e-134 481.9 537 52.7
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 6.5e-134 481.9 507 57.6
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 8.5e-134 481.5 523 52.0
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 8.5e-134 481.5 524 56.5
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 2.5e-133 479.9 537 52.9
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 9.4e-133 478.0 557 50.6
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 1.6e-132 477.2 524 54.0
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 4.7e-132 475.7 520 54.4
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 1.8e-131 473.8 502 55.0
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 6.8e-131 471.9 535 53.8
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 2.0e-130 470.3 502 55.0
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 2.6e-130 469.9 523 54.9
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 3.4e-130 469.5 535 53.8
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 5.7e-130 468.8 505 57.6
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 7.5e-130 468.4 535 53.8
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.8e-128 463.8 535 52.3
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 2.0e-127 460.3 526 51.5
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 2.0e-127 460.3 524 53.6
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 1.0e-126 458.0 512 56.1
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 1.5e-125 454.1 525 51.4
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 5.5e-125 452.2 532 51.5
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 2.7e-124 449.9 552 51.1
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 5.2e-123 445.7 474 54.6
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 2.6e-122 443.4 515 52.0
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 2.8e-121 439.9 521 51.2
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 2.8e-121 439.9 553 49.5
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 4.9e-121 439.1 520 52.7
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 1.8e-120 437.2 544 50.2
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 4.1e-120 436.0 526 50.0
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 1.2e-119 434.5 545 49.4
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.5e-119 433.0 510 54.5
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 5.9e-119 432.2 505 54.9
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 5.9e-119 432.2 505 54.7
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 5.9e-119 432.2 520 51.3
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 7.7e-119 431.8 515 51.1
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.7e-118 430.6 505 54.3
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 5.0e-118 429.1 524 50.0
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 1.9e-117 427.2 510 51.6
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 7.2e-117 425.2 521 51.4
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.2e-116 424.5 490 56.1
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.2e-116 424.5 532 48.7
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 1.0e-115 421.4 516 52.3
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 2.3e-115 420.2 528 48.1
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 6.8e-115 418.7 516 51.6
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 7.5e-114 415.2 515 49.5
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 2.9e-113 413.3 503 52.3
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 1.1e-112 411.4 638 44.7
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 4.1e-112 409.5 560 47.1
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 5.4e-112 409.1 604 45.7
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 3.5e-111 406.4 515 48.9
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.0e-110 404.8 452 54.9
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.7e-110 404.1 518 47.7
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 3.9e-110 402.9 536 49.4
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 3.3e-109 399.8 537 47.7
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 5.6e-109 399.1 560 46.4
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 3.6e-108 396.4 548 48.5
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 3.1e-107 393.3 531 46.5
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 1.2e-106 391.3 522 46.6
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 1.2e-106 391.3 516 48.6
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 2.0e-106 390.6 545 49.2
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 2.6e-106 390.2 525 48.0
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 4.4e-106 389.4 528 46.2
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 2.9e-105 386.7 524 46.9
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 8.3e-105 385.2 522 46.4
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.4e-104 382.5 327 67.0
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 7.0e-104 382.1 481 50.9
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 3.0e-102 376.7 536 43.5
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 6.8e-99 365.5 456 49.8
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.4e-96 357.8 514 46.1
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 2.4e-96 357.1 495 47.9
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 7.1e-96 355.5 468 48.3
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.6e-92 344.4 526 43.2
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 8.9e-91 338.6 503 47.5
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 2.0e-90 337.4 460 45.4
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 7.6e-90 335.5 477 48.8
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 9.9e-90 335.1 247 70.0
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 2.4e-88 330.5 504 44.6
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 5.4e-88 329.3 457 47.9
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 2.1e-87 327.4 537 45.3
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 3.5e-87 326.6 473 47.8
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 4.6e-87 326.2 511 46.2
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 6.0e-87 325.9 327 56.9
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 1.3e-86 324.7 428 48.1
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 3.3e-85 320.1 505 44.8
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 7.3e-85 318.9 476 47.3
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.7e-81 307.8 437 49.2
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 6.4e-81 305.8 476 46.0
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 8.4e-81 305.4 522 42.5
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 5.4e-80 302.8 487 43.9
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 7.1e-80 302.4 475 45.9
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 7.1e-80 302.4 477 45.1
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 9.3e-80 302.0 248 64.1
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.2e-79 301.6 351 51.6
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.3e-78 298.1 395 49.9
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 1.7e-78 297.7 521 41.3
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 2.3e-78 297.4 521 42.0
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 3.3e-77 293.5 533 43.5
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 1.6e-76 291.2 472 44.1
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 2.4e-75 287.3 475 42.9
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 3.1e-75 287.0 522 41.0
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 1.2e-74 285.0 466 40.3
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 2.0e-74 284.3 327 54.4
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 5.8e-74 282.7 486 42.0
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.2e-73 280.8 225 65.8
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 1.9e-72 277.7 482 43.8
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 1.6e-71 274.6 421 40.6
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 4.6e-71 273.1 204 68.1
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 3.3e-69 266.9 217 63.6
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 2.8e-68 263.8 476 41.6
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 3.4e-66 256.9 467 40.7
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 4.5e-66 256.5 295 50.5
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.5e-61 241.5 496 33.3
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 9.6e-61 238.8 263 53.6
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 2.4e-59 234.2 504 36.1
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.5e-58 231.5 142 83.8
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 1.5e-58 231.5 258 46.9
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.7e-55 220.7 225 56.4
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 3.7e-52 210.3 378 41.5
Rhsim05G0045800 Rhododendron simsii HOM05D003626 ORTHO05D004255 9.7e-45 185.7 336 40.5
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.6e-44 184.9 230 53.9
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 7.9e-39 166.0 330 35.8
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.1e-37 162.2 196 46.4
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 2.6e-34 151.0 327 37.9
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.6e-31 141.7 200 44.5
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 3.6e-31 140.6 98 74.5
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 4.7e-31 140.2 334 36.5
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 9.7e-29 132.5 373 36.7
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 9.7e-29 132.5 101 63.4
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.4e-27 128.6 336 37.5
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 5.3e-27 126.7 85 80.0
Oeu035062.1 Olea europaea HOM05D003626 ORTHO05D004255 2.2e-25 121.3 184 45.7
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 1.6e-23 115.2 216 34.3
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 4.0e-22 110.5 65 84.6
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 2.7e-15 87.8 100 51.0
HPP92_028446 Vanilla planifolia HOM05D003626 ORTHO05D004255 3.7e-12 77.4 116 40.5
TAR374G0267 Trochodendron aralioides HOM05D003626 ORTHO05D004255 4.1e-11 73.9 97 47.4
SHI13766 Sapria himalayana HOM05D003626 ORTHO05D004255 1.2e-10 72.4 139 33.8
RhsimUnG0140300 Rhododendron simsii HOM05D003626 ORTHO05D004255 2.0e-10 71.6 176 34.1
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.0e-09 69.3 75 48.0
HPP92_001477 Vanilla planifolia HOM05D003626 ORTHO05D004255 3.2e-08 64.3 52 55.8
HPP92_027487 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.8e-06 58.5 56 64.3
HPP92_028450 Vanilla planifolia HOM05D003626 ORTHO05D004255 3.0e-06 57.8 169 30.8


User provided reference genes

Program Settings