Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35132 Davidia involucrata HOM05D005963 ORTHO05D006869 0.0e+00 1647.1 875 100.0
CSS0028871 Camellia sinensis var. sinensis HOM05D005963 ORTHO05D006869 0.0e+00 1260.0 1002 69.7
Dinv28513 Davidia involucrata HOM05D005963 ORTHO05D006869 0.0e+00 1243.4 858 81.9
GSVIVG01018456001 Vitis vinifera HOM05D005963 ORTHO05D006869 0.0e+00 1212.6 931 67.9
Hma1.2p1_0488F.1_g163860 Hydrangea macrophylla HOM05D005963 ORTHO05D006869 0.0e+00 1194.5 987 66.4
QL12p038851 Quercus lobata HOM05D005963 ORTHO05D006869 0.0e+00 1171.4 990 64.6
CAN.G1257.1 Capsicum annuum HOM05D005963 ORTHO05D006869 0.0e+00 1158.7 1007 63.0
Thecc.03G166100 Theobroma cacao HOM05D005963 ORTHO05D006869 0.0e+00 1156.4 998 62.4
Duzib205G1443 Durio zibethinus HOM05D005963 ORTHO05D006869 0.0e+00 1152.1 1007 62.5
Potri.012G132300 Populus trichocarpa HOM05D005963 ORTHO05D006869 0.0e+00 1146.7 1001 61.8
Ciclev10004233m.g Citrus clementina HOM05D005963 ORTHO05D006869 0.0e+00 1144.4 964 65.8
CiPaw.03G099400 Carya illinoinensis HOM05D005963 ORTHO05D006869 0.0e+00 1144.0 934 67.5
Nn6g34339 Nelumbo nucifera HOM05D005963 ORTHO05D006869 0.0e+00 1140.9 1011 61.7
Oeu030146.1 Olea europaea HOM05D005963 ORTHO05D006869 0.0e+00 1140.6 952 64.3
Oeu030148.1 Olea europaea HOM05D005963 ORTHO05D006869 0.0e+00 1140.2 952 64.3
TAR374G1343 Trochodendron aralioides HOM05D005963 ORTHO05D006869 0.0e+00 1132.9 988 66.7
Peaxi162Scf00192g00613 Petunia axillaris HOM05D005963 ORTHO05D006869 0.0e+00 1126.3 926 64.6
Nitab4.5_0000124g0020 Nicotiana tabacum HOM05D005963 ORTHO05D006869 0.0e+00 1119.0 975 63.4
Solyc03g006900.2 Solanum lycopersicum HOM05D005963 ORTHO05D006869 0.0e+00 1118.2 997 61.4
Cpa.g.sc4.183 Carica papaya HOM05D005963 ORTHO05D006869 0.0e+00 1116.3 1015 60.7
Sabra12G0099600 Salix brachista HOM05D005963 ORTHO05D006869 0.0e+00 1110.9 975 62.6
Actinidia25056 Actinidia chinensis HOM05D005963 ORTHO05D006869 0.0e+00 1106.7 954 62.7
Haze_13797 Corylus avellana HOM05D005963 ORTHO05D006869 0.0e+00 1104.7 923 63.5
Duzib068G1175 Durio zibethinus HOM05D005963 ORTHO05D006869 0.0e+00 1104.0 1021 58.9
Manes.06G140900 Manihot esculenta HOM05D005963 ORTHO05D006869 0.0e+00 1102.0 999 63.1
Sopen03g002900 Solanum pennellii HOM05D005963 ORTHO05D006869 0.0e+00 1101.3 1000 60.6
Nitab4.5_0000371g0030 Nicotiana tabacum HOM05D005963 ORTHO05D006869 0.0e+00 1100.5 939 64.6
Rhsim03G0174100 Rhododendron simsii HOM05D005963 ORTHO05D006869 0.0e+00 1100.5 990 60.7
Actinidia13537 Actinidia chinensis HOM05D005963 ORTHO05D006869 0.0e+00 1096.6 1001 60.0
CiPaw.04G064800 Carya illinoinensis HOM05D005963 ORTHO05D006869 0.0e+00 1083.2 1008 59.8
Prupe.2G286400 Prunus persica HOM05D005963 ORTHO05D006869 0.0e+00 1076.6 1018 58.3
TWI14G0479 Tripterygium wilfordii HOM05D005963 ORTHO05D006869 1.8e-311 1072.4 956 62.6
PGR142G0011 Punica granatum HOM05D005963 ORTHO05D006869 1.0e-309 1066.6 1005 59.4
MD01G1192000 Malus domestica HOM05D005963 ORTHO05D006869 1.0e-306 1056.6 1017 59.0
Aqoxy7G00515 Aquilegia oxysepala HOM05D005963 ORTHO05D006869 7.5e-305 1050.4 904 62.3
vmacro22547 Vaccinium macrocarpon HOM05D005963 ORTHO05D006869 5.0e-301 1037.7 775 66.8
MD00G1003400 Malus domestica HOM05D005963 ORTHO05D006869 2.3e-298 1028.9 1019 57.8
Eucgr.K00183 Eucalyptus grandis HOM05D005963 ORTHO05D006869 2.8e-296 1021.9 986 57.8
DCAR_018136 Daucus carota HOM05D005963 ORTHO05D006869 4.1e-295 1018.1 963 59.4
Lsat_1_v5_gn_9_53261 Lactuca sativa HOM05D005963 ORTHO05D006869 8.6e-293 1010.4 1037 59.1
SHI13839 Sapria himalayana HOM05D005963 ORTHO05D006869 1.1e-292 1010.0 1006 55.6
Lj8C34G2 Lonicera japonica HOM05D005963 ORTHO05D006869 2.5e-292 1008.8 914 63.2
RcHm_v2.0_Chr1g0376121 Rosa chinensis HOM05D005963 ORTHO05D006869 2.5e-292 1008.8 1022 58.4
Gorai.008G282200 Gossypium raimondii HOM05D005963 ORTHO05D006869 5.8e-289 997.7 756 67.6
Gohir.D12G263300 Gossypium hirsutum HOM05D005963 ORTHO05D006869 9.8e-289 996.9 756 67.7
Gohir.A12G262600 Gossypium hirsutum HOM05D005963 ORTHO05D006869 6.4e-288 994.2 756 67.2
Gohir.A07G040200 Gossypium hirsutum HOM05D005963 ORTHO05D006869 3.9e-285 984.9 634 75.6
FAN06G4856 Fragaria x ananassa HOM05D005963 ORTHO05D006869 6.6e-285 984.2 1018 54.8
FAN06G2356 Fragaria x ananassa HOM05D005963 ORTHO05D006869 3.3e-284 981.9 1018 54.7
PSO782G2761 Papaver somniferum HOM05D005963 ORTHO05D006869 1.2e-283 979.9 946 56.2
FvH4_7g28640 Fragaria vesca HOM05D005963 ORTHO05D006869 2.1e-283 979.2 1018 54.7
Gorai.001G047400 Gossypium raimondii HOM05D005963 ORTHO05D006869 6.2e-283 977.6 908 58.8
VMungo0464G1720 Vigna mungo HOM05D005963 ORTHO05D006869 1.1e-282 976.9 948 56.5
ECA232G0907 Erigeron canadensis HOM05D005963 ORTHO05D006869 2.3e-282 975.7 944 57.1
FAN03G0518 Fragaria x ananassa HOM05D005963 ORTHO05D006869 6.8e-282 974.2 1001 54.8
FAN01G2646 Fragaria x ananassa HOM05D005963 ORTHO05D006869 1.1e-279 966.8 1001 54.6
HanXRQChr15g0486261 Helianthus annuus HOM05D005963 ORTHO05D006869 1.2e-278 963.4 1031 54.0
Phvul.004G124000 Phaseolus vulgaris HOM05D005963 ORTHO05D006869 6.0e-278 961.1 936 57.2
PSO478G0110 Papaver somniferum HOM05D005963 ORTHO05D006869 1.3e-277 959.9 917 57.7
Glyma.09G149700 Glycine max HOM05D005963 ORTHO05D006869 2.8e-275 952.2 947 59.6
COL.COLO4_14220 Corchorus olitorius HOM05D005963 ORTHO05D006869 4.4e-273 944.9 736 65.8
Lj2g0022710 Lotus japonicus HOM05D005963 ORTHO05D006869 7.1e-271 937.6 1008 57.5
HanXRQChr14g0433491 Helianthus annuus HOM05D005963 ORTHO05D006869 4.3e-268 928.3 949 54.3
FAN10G3242 Fragaria x ananassa HOM05D005963 ORTHO05D006869 1.6e-267 926.4 997 54.2
Sed0018627 Sechium edule HOM05D005963 ORTHO05D006869 8.9e-266 920.6 954 54.2
Medtr0007s0220 Medicago truncatula HOM05D005963 ORTHO05D006869 2.0e-265 919.5 950 53.3
MELO3C006856.2 Cucumis melo HOM05D005963 ORTHO05D006869 8.4e-264 914.1 980 51.3
arahy.Tifrunner.gnm1.ann1.G2RQNR Arachis hypogaea HOM05D005963 ORTHO05D006869 3.3e-260 902.1 967 57.4
Lalb_Chr19g0131211 Lupinus albus HOM05D005963 ORTHO05D006869 6.2e-259 897.9 998 55.8
TPR.G26590 Trifolium pratense HOM05D005963 ORTHO05D006869 6.2e-259 897.9 936 57.2
arahy.Tifrunner.gnm1.ann1.R4K09I Arachis hypogaea HOM05D005963 ORTHO05D006869 1.4e-258 896.7 943 57.2
Psat1g106960 Pisum sativum HOM05D005963 ORTHO05D006869 2.2e-256 889.4 965 56.6
ClCG05G007670 Citrullus lanatus HOM05D005963 ORTHO05D006869 3.5e-254 882.1 970 55.9
PGSC0003DMG400007557 Solanum tuberosum HOM05D005963 ORTHO05D006869 4.6e-254 881.7 537 78.0
Cc02_g03640 Coffea canephora HOM05D005963 ORTHO05D006869 2.3e-253 879.4 540 78.0
CsaV3_3G016590 Cucumis sativus L. HOM05D005963 ORTHO05D006869 8.7e-253 877.5 985 49.7
THA.LOC104825083 Tarenaya hassleriana HOM05D005963 ORTHO05D006869 8.7e-245 850.9 812 54.8
Gohir.D07G044301 Gossypium hirsutum HOM05D005963 ORTHO05D006869 1.6e-243 846.7 528 76.5
AL8G26090 Arabidopsis lyrata HOM05D005963 ORTHO05D006869 2.5e-231 806.2 855 51.2
Thhalv10015853m.g Eutrema salsugineum HOM05D005963 ORTHO05D006869 3.2e-231 805.8 843 52.1
Carub.0008s1182 Capsella rubella HOM05D005963 ORTHO05D006869 6.1e-230 801.6 842 51.5
AT5G51800 Arabidopsis thaliana HOM05D005963 ORTHO05D006869 3.3e-228 795.8 849 51.2
CARHR264680 Cardamine hirsuta HOM05D005963 ORTHO05D006869 2.4e-226 789.6 843 51.6
Sp6g14050 Schrenkiella parvula HOM05D005963 ORTHO05D006869 3.4e-225 785.8 968 48.9
A10p09630 Brassica napus HOM05D005963 ORTHO05D006869 1.0e-224 784.3 837 51.5
BraA10t43044Z Brassica rapa HOM05D005963 ORTHO05D006869 1.0e-224 784.3 837 51.5
EL10Ac3g05753 Beta vulgaris HOM05D005963 ORTHO05D006869 2.9e-224 782.7 839 51.7
CDE08G0260 Ceratophyllum demersum HOM05D005963 ORTHO05D006869 7.2e-223 778.1 673 58.2
AUR62016071 Chenopodium quinoa HOM05D005963 ORTHO05D006869 6.1e-222 775.0 756 55.7
BolC9t56999H Brassica oleracea HOM05D005963 ORTHO05D006869 1.0e-221 774.2 837 50.5
BolC2t08150H Brassica oleracea HOM05D005963 ORTHO05D006869 6.7e-221 771.5 836 50.6
A02p12120 Brassica napus HOM05D005963 ORTHO05D006869 9.7e-220 767.7 836 51.1
BraA02t06276Z Brassica rapa HOM05D005963 ORTHO05D006869 9.7e-220 767.7 836 51.1
EL10Ac7g16401 Beta vulgaris HOM05D005963 ORTHO05D006869 4.8e-219 765.4 843 50.8
C02p20220 Brassica napus HOM05D005963 ORTHO05D006869 1.1e-218 764.2 836 50.2
SEGI_31852 Sequoiadendron giganteum HOM05D005963 ORTHO05D006869 5.3e-218 761.9 802 50.4
FAN03G0902 Fragaria x ananassa HOM05D005963 ORTHO05D006869 1.2e-217 760.8 735 55.8
BcaB08g35527 Brassica carinata HOM05D005963 ORTHO05D006869 3.4e-217 759.2 840 49.9
Ah.13g067680 Amaranthus hybridus HOM05D005963 ORTHO05D006869 6.3e-211 738.4 874 46.9
BcaC04g20635 Brassica carinata HOM05D005963 ORTHO05D006869 1.8e-210 736.9 837 48.7
AUR62021279 Chenopodium quinoa HOM05D005963 ORTHO05D006869 1.5e-209 733.8 639 60.3
BcaC03g14575 Brassica carinata HOM05D005963 ORTHO05D006869 3.9e-205 719.2 836 48.3
Hund04676 Selenicereus undatus HOM05D005963 ORTHO05D006869 5.9e-201 705.3 639 58.4
Sc25g0000220 Simmondsia chinensis HOM05D005963 ORTHO05D006869 4.7e-198 695.7 953 44.1
Atru.chr1.580 Acer truncatum HOM05D005963 ORTHO05D006869 2.3e-168 597.0 387 74.4
ATR0661G117 Amborella trichopoda HOM05D005963 ORTHO05D006869 4.1e-154 549.7 463 57.0
Aa31LG3G8240 Aethionema arabicum HOM05D005963 ORTHO05D006869 4.3e-127 459.9 405 55.3
C09p41240 Brassica napus HOM05D005963 ORTHO05D006869 6.7e-112 409.5 532 46.1
Glyma.16G201100 Glycine max HOM05D005963 ORTHO05D006869 8.5e-83 312.8 498 51.8
PGSC0003DMG400007558 Solanum tuberosum HOM05D005963 ORTHO05D006869 4.7e-81 307.0 312 51.6
Atru.chr1.581 Acer truncatum HOM05D005963 ORTHO05D006869 8.0e-57 226.5 391 49.1
MBI05_g12587_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 2.0e-52 211.8 153 64.7
ATR0661G452 Amborella trichopoda HOM05D005963 ORTHO05D006869 5.8e-47 193.7 494 33.0
Pp3c26_6160 Physcomitrium patens HOM05D005963 ORTHO05D006869 1.3e-46 192.6 374 34.0
Pp3c26_6250 Physcomitrium patens HOM05D005963 ORTHO05D006869 1.3e-46 192.6 374 34.0
Pp3c2_90 Physcomitrium patens HOM05D005963 ORTHO05D006869 1.4e-45 189.1 371 34.0
MBI05_g12586_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 3.2e-45 188.0 184 55.4
Pp3c18_1570 Physcomitrium patens HOM05D005963 ORTHO05D006869 3.2e-45 188.0 374 33.2
Ca_05417_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 4.6e-36 157.5 124 58.9
SMO174G0009 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 8.9e-32 143.3 386 27.5
SMO276G0013 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 3.4e-31 141.4 317 30.3
SMO358G0565 Selaginella moellendorffii HOM05D001046 ORTHO05D007174 2.3e-27 128.6 389 30.6
Ca_30119_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 1.3e-25 122.9 101 57.4
SMO116G0123 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 3.9e-19 101.3 292 28.4
SMO195G0003 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 5.1e-19 100.9 291 28.2
CDE08G0941 Ceratophyllum demersum HOM05D005963 ORTHO05D006869 7.4e-18 97.1 100 56.0
Dinv24731 Davidia involucrata HOM05D005963 ORTHO05D006869 1.5e-15 89.4 64 78.1
SMO268G0015 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 5.1e-11 74.3 153 29.4
Cre02.g095117 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 2.1e-09 68.9 355 22.0
Cre01.g041800 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 1.8e-08 65.9 339 21.2
Cre08.g380452 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 1.3e-06 59.7 295 20.7
Cre06.g306050 Chlamydomonas reinhardtii HOM05D020067 ORTHO05D010759 1.7e-06 59.3 382 24.1


User provided reference genes

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