Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35088 Davidia involucrata HOM05D003958 ORTHO05D004864 3.0e-176 621.7 306 100.0
TAR622G1043 Trochodendron aralioides HOM05D003958 ORTHO05D004864 1.2e-113 413.7 310 69.4
FvH4_6g51011 Fragaria vesca HOM05D003958 ORTHO05D004864 1.8e-112 409.8 312 68.9
CSS0020788 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 6.8e-112 407.9 312 69.2
CSS0020854 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 6.8e-112 407.9 312 69.2
Prupe.3G287900 Prunus persica HOM05D003958 ORTHO05D004864 1.2e-111 407.1 312 69.2
RcHm_v2.0_Chr2g0172551 Rosa chinensis HOM05D003958 ORTHO05D004864 5.8e-111 404.8 313 68.7
Duzib147G0735 Durio zibethinus HOM05D003958 ORTHO05D004864 7.5e-111 404.4 310 68.7
CiPaw.03G040700 Carya illinoinensis HOM05D003958 ORTHO05D004864 6.4e-110 401.4 312 68.6
Duzib147G0566 Durio zibethinus HOM05D003958 ORTHO05D004864 5.4e-109 398.3 310 68.1
Manes.17G113700 Manihot esculenta HOM05D003958 ORTHO05D004864 5.4e-109 398.3 309 68.9
Ciclev10016011m.g Citrus clementina HOM05D003958 ORTHO05D004864 3.5e-108 395.6 312 66.3
Peaxi162Scf00129g01325 Petunia axillaris HOM05D003958 ORTHO05D004864 7.8e-108 394.4 309 67.0
Thecc.04G013700 Theobroma cacao HOM05D003958 ORTHO05D004864 7.8e-108 394.4 310 67.4
Atru.chr6.2341 Acer truncatum HOM05D003958 ORTHO05D004864 1.3e-107 393.7 313 68.7
vmacro18265 Vaccinium macrocarpon HOM05D003958 ORTHO05D004864 1.7e-107 393.3 331 65.3
CAN.G206.10 Capsicum annuum HOM05D003958 ORTHO05D004864 2.3e-107 392.9 309 67.0
QL02p075632 Quercus lobata HOM05D003958 ORTHO05D004864 5.1e-107 391.7 311 67.2
DCAR_009028 Daucus carota HOM05D003958 ORTHO05D004864 6.6e-107 391.3 317 65.9
Duzib147G0897 Durio zibethinus HOM05D003958 ORTHO05D004864 8.6e-107 391.0 314 67.5
PGSC0003DMG400000483 Solanum tuberosum HOM05D003958 ORTHO05D004864 2.5e-106 389.4 309 67.0
Sopen02g031390 Solanum pennellii HOM05D003958 ORTHO05D004864 3.3e-106 389.0 309 66.3
CiPaw.04G026700 Carya illinoinensis HOM05D003958 ORTHO05D004864 7.3e-106 387.9 312 66.0
Nitab4.5_0002739g0040 Nicotiana tabacum HOM05D003958 ORTHO05D004864 7.3e-106 387.9 309 66.0
COL.COLO4_29053 Corchorus olitorius HOM05D003958 ORTHO05D004864 1.6e-105 386.7 312 66.0
Lj7A595G65 Lonicera japonica HOM05D003958 ORTHO05D004864 2.1e-105 386.3 313 66.8
Nn7g37719 Nelumbo nucifera HOM05D003958 ORTHO05D004864 1.4e-104 383.6 312 64.7
MBI05_g22036_MAGBIO Magnolia biondii HOM05D003958 ORTHO05D004864 1.8e-104 383.3 310 67.1
Nitab4.5_0008215g0010 Nicotiana tabacum HOM05D003958 ORTHO05D004864 1.8e-104 383.3 311 65.3
CANSAT64G0951 Cannabis sativa HOM05D003958 ORTHO05D004864 3.1e-104 382.5 316 65.2
Lalb_Chr03g0031671 Lupinus albus HOM05D003958 ORTHO05D004864 5.2e-104 381.7 312 67.0
Aqoxy2G00425 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 2.6e-103 379.4 313 65.2
Lju41A38T12 Lonicera japonica HOM05D003958 ORTHO05D004864 2.6e-103 379.4 312 64.7
Sed0009763 Sechium edule HOM05D003958 ORTHO05D004864 2.6e-103 379.4 312 65.4
Potri.018G120500 Populus trichocarpa HOM05D003958 ORTHO05D004864 3.4e-103 379.0 312 65.4
ClCG01G008920 Citrullus lanatus HOM05D003958 ORTHO05D004864 1.3e-102 377.1 312 64.7
Haze_14701 Corylus avellana HOM05D003958 ORTHO05D004864 1.3e-102 377.1 311 65.6
MD09G1029500 Malus domestica HOM05D003958 ORTHO05D004864 1.7e-102 376.7 269 71.7
arahy.Tifrunner.gnm1.ann1.38SPRB Arachis hypogaea HOM05D003958 ORTHO05D004864 2.9e-102 375.9 311 66.2
arahy.Tifrunner.gnm1.ann1.CB8F3G Arachis hypogaea HOM05D003958 ORTHO05D004864 2.9e-102 375.9 311 66.2
CsaV3_1G037790 Cucumis sativus L. HOM05D003958 ORTHO05D004864 2.9e-102 375.9 313 64.9
Eucgr.I01766 Eucalyptus grandis HOM05D003958 ORTHO05D004864 3.7e-102 375.6 309 66.0
Sabra18G0100500 Salix brachista HOM05D003958 ORTHO05D004864 3.7e-102 375.6 312 64.4
Sabra18G0099100 Salix brachista HOM05D003958 ORTHO05D004864 4.9e-102 375.2 312 64.1
Aqoxy3G00906 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 6.4e-102 374.8 314 64.3
PGR054G0003 Punica granatum HOM05D003958 ORTHO05D004864 2.4e-101 372.9 310 63.9
PGR119G1149 Punica granatum HOM05D003958 ORTHO05D004864 2.4e-101 372.9 310 63.9
MELO3C021808.2 Cucumis melo HOM05D003958 ORTHO05D004864 5.4e-101 371.7 313 64.5
Lsat_1_v5_gn_4_183181 Lactuca sativa HOM05D003958 ORTHO05D004864 5.4e-101 371.7 317 63.7
TPR.G11724 Trifolium pratense HOM05D003958 ORTHO05D004864 7.1e-101 371.3 316 62.3
Oeu057051.1 Olea europaea HOM05D003958 ORTHO05D004864 9.2e-101 370.9 309 64.1
Phvul.011G172200 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 1.2e-100 370.5 311 64.6
Cpa.g.sc108.31 Carica papaya HOM05D003958 ORTHO05D004864 2.1e-100 369.8 312 63.5
Ca_00369_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 2.7e-100 369.4 312 65.1
Lj2g0025561 Lotus japonicus HOM05D003958 ORTHO05D004864 6.0e-100 368.2 312 64.1
TPR.G33516 Trifolium pratense HOM05D003958 ORTHO05D004864 7.8e-100 367.9 316 64.6
Lj3g0001252 Lotus japonicus HOM05D003958 ORTHO05D004864 1.0e-99 367.5 312 65.1
Hund02774 Selenicereus undatus HOM05D003958 ORTHO05D004864 1.7e-99 366.7 322 62.1
TWI12G0059 Tripterygium wilfordii HOM05D003958 ORTHO05D004864 3.0e-99 365.9 310 65.5
Cc02_g12190 Coffea canephora HOM05D003958 ORTHO05D004864 3.9e-99 365.5 310 62.9
Sabra18G0101000 Salix brachista HOM05D003958 ORTHO05D004864 3.9e-99 365.5 269 69.5
Gohir.A09G027800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 8.6e-99 364.4 312 63.8
Gohir.D09G027100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.9e-98 363.2 312 63.8
Gorai.006G031600 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.9e-98 363.2 312 63.8
Gohir.D13G007800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 5.6e-98 361.7 306 63.7
HanXRQChr09g0255001 Helianthus annuus HOM05D003958 ORTHO05D004864 7.3e-98 361.3 313 62.3
PSO832G3613 Papaver somniferum HOM05D003958 ORTHO05D004864 7.3e-98 361.3 311 62.1
Sabra18G0098500 Salix brachista HOM05D003958 ORTHO05D004864 1.6e-97 360.1 269 69.5
Ca_00876_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 2.8e-97 359.4 308 64.0
Psat1g092800 Pisum sativum HOM05D003958 ORTHO05D004864 2.8e-97 359.4 315 63.8
ECA232G3491 Erigeron canadensis HOM05D003958 ORTHO05D004864 3.6e-97 359.0 311 62.7
PSO063G1059 Papaver somniferum HOM05D003958 ORTHO05D004864 3.6e-97 359.0 311 61.7
VMungo0540G0822 Vigna mungo HOM05D003958 ORTHO05D004864 3.6e-97 359.0 313 64.2
Phvul.006G181700 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 4.7e-97 358.6 313 63.9
MSTRG.3157 Avicennia marina HOM05D003958 ORTHO05D004864 6.2e-97 358.2 309 63.1
Medtr6g047800 Medicago truncatula HOM05D003958 ORTHO05D004864 6.2e-97 358.2 309 64.1
EL10Ac9g21169 Beta vulgaris HOM05D003958 ORTHO05D004864 1.8e-96 356.7 312 61.2
Glyma.15G078000 Glycine max HOM05D003958 ORTHO05D004864 4.0e-96 355.5 312 63.8
Migut.H00096 Erythranthe guttata HOM05D003958 ORTHO05D004864 1.2e-95 354.0 309 61.8
Hma1.2p1_0858F.1_g229230 Hydrangea macrophylla HOM05D003958 ORTHO05D004864 2.0e-95 353.2 333 60.7
Glyma.13G234900 Glycine max HOM05D003958 ORTHO05D004864 2.6e-95 352.8 314 64.3
THA.LOC104821089 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 1.3e-94 350.5 312 61.2
THA.LOC104802398 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 1.7e-94 350.1 316 59.8
Psat1g202680 Pisum sativum HOM05D003958 ORTHO05D004864 6.4e-94 348.2 309 62.5
Sabra18G0098900 Salix brachista HOM05D003958 ORTHO05D004864 1.1e-93 347.4 263 67.7
CDE06G0036 Ceratophyllum demersum HOM05D003958 ORTHO05D004864 1.4e-93 347.1 310 61.6
AT5G14600 Arabidopsis thaliana HOM05D003958 ORTHO05D004864 1.2e-92 344.0 319 58.6
Aa31LG11G15350 Aethionema arabicum HOM05D003958 ORTHO05D004864 4.6e-92 342.0 322 59.3
Sc03g0007660 Simmondsia chinensis HOM05D003958 ORTHO05D004864 1.0e-91 340.9 310 59.4
AL6G25360 Arabidopsis lyrata HOM05D003958 ORTHO05D004864 2.3e-91 339.7 319 58.3
ATR0057G029 Amborella trichopoda HOM05D003958 ORTHO05D004864 1.1e-90 337.4 319 59.9
AUR62002487 Chenopodium quinoa HOM05D003958 ORTHO05D004864 1.1e-90 337.4 330 56.4
Carub.0006s1277 Capsella rubella HOM05D003958 ORTHO05D004864 3.3e-90 335.9 324 57.7
Thhalv10014133m.g Eutrema salsugineum HOM05D003958 ORTHO05D004864 4.7e-89 332.0 321 58.3
AUR62023705 Chenopodium quinoa HOM05D003958 ORTHO05D004864 8.1e-89 331.3 299 59.9
FAN14G0618 Fragaria x ananassa HOM05D003958 ORTHO05D004864 8.1e-89 331.3 265 66.4
CARHR198720 Cardamine hirsuta HOM05D003958 ORTHO05D004864 1.4e-88 330.5 319 57.4
SGA_v2.0_scaffold196G40937 Striga asiatica HOM05D003958 ORTHO05D004864 1.8e-88 330.1 311 59.5
FAN09G1134 Fragaria x ananassa HOM05D003958 ORTHO05D004864 4.0e-88 328.9 268 65.7
A10p24040 Brassica napus HOM05D003958 ORTHO05D004864 6.9e-88 328.2 321 56.4
C09p62510 Brassica napus HOM05D003958 ORTHO05D004864 9.0e-88 327.8 321 57.0
BraA10t44467Z Brassica rapa HOM05D003958 ORTHO05D004864 2.6e-87 326.2 321 56.1
BolC9t59091H Brassica oleracea HOM05D003958 ORTHO05D004864 8.4e-86 321.2 328 55.5
Cfa007405 Carpinus fangiana HOM05D003958 ORTHO05D004864 1.4e-85 320.5 314 58.6
Sp6g29430 Schrenkiella parvula HOM05D003958 ORTHO05D004864 2.4e-85 319.7 315 56.2
BcaNung03113 Brassica carinata HOM05D003958 ORTHO05D004864 2.7e-84 316.2 317 55.5
CSS0027303 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 2.3e-83 313.2 294 60.9
Zm00001eb071120 Zea mays HOM05D003958 ORTHO05D004864 5.1e-83 312.0 320 53.4
arahy.Tifrunner.gnm1.ann1.8Z0BSJ Arachis hypogaea HOM05D003958 ORTHO05D004864 1.3e-78 297.4 318 54.7
SEGI_01237 Sequoiadendron giganteum HOM05D003958 ORTHO05D004864 1.7e-78 297.0 322 52.5
Os04g0319600 Oryza sativa ssp. japonica HOM05D003958 ORTHO05D004864 6.4e-78 295.0 322 51.6
MD17G1031500 Malus domestica HOM05D003958 ORTHO05D004864 1.4e-77 293.9 208 72.6
BcaC03g13470 Brassica carinata HOM05D003958 ORTHO05D004864 4.6e-76 288.9 304 53.9
Gorai.013G008200 Gossypium raimondii HOM05D003958 ORTHO05D004864 3.3e-74 282.7 306 53.3
arahy.Tifrunner.gnm1.ann1.Z5MU8N Arachis hypogaea HOM05D003958 ORTHO05D004864 1.8e-72 276.9 172 81.4
HPP92_013732 Vanilla planifolia HOM05D003958 ORTHO05D004864 1.0e-70 271.2 182 72.5
Atru.chr6.2249 Acer truncatum HOM05D003958 ORTHO05D004864 3.0e-67 259.6 165 80.0
AagrBONN_evm.TU.Sc2ySwM_344.690 Anthoceros agrestis HOM05D003958 ORTHO05D004864 8.7e-67 258.1 278 53.2
Mapoly0053s0094 Marchantia polymorpha HOM05D003958 ORTHO05D004864 1.6e-65 253.8 306 47.1
Medtr2g014590 Medicago truncatula HOM05D003958 ORTHO05D004864 1.6e-65 253.8 177 72.3
SMO361G0280 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 1.8e-64 250.4 273 53.8
SMO361G0823 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 2.4e-64 250.0 273 53.5
Pp3c18_5220 Physcomitrium patens HOM05D003958 ORTHO05D004864 1.3e-62 244.2 294 50.3
arahy.Tifrunner.gnm1.ann1.M5ZQAR Arachis hypogaea HOM05D003958 ORTHO05D004864 1.6e-60 237.3 170 74.7
Ah.07g203270 Amaranthus hybridus HOM05D003958 ORTHO05D004864 2.6e-55 219.9 150 74.7
unitig_62.g23558 Utricularia gibba HOM05D003958 ORTHO05D004864 2.2e-54 216.9 211 58.3
SGA_v2.0_scaffold34G13865 Striga asiatica HOM05D003958 ORTHO05D004864 1.4e-51 207.6 322 42.9
CBR_g9110 Chara braunii HOM05D003958 ORTHO05D004864 8.8e-51 204.9 205 53.7
Cre05.g244236 Chlamydomonas reinhardtii HOM05D003958 ORTHO05D004864 2.2e-49 200.3 231 49.4
GSVIVG01032441001 Vitis vinifera HOM05D000462 ORTHO05D002607 1.1e-48 198.0 157 66.9
Gohir.A10G243400 Gossypium hirsutum HOM05D003958 ORTHO05D004864 4.5e-47 192.6 134 72.4
Gohir.A03G000004 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.9e-46 189.9 98 91.8
arahy.Tifrunner.gnm1.ann1.FV4QAS Arachis hypogaea HOM05D003958 ORTHO05D004864 1.6e-44 184.1 124 79.0
MCO10G191 Micromonas commoda HOM05D003958 ORTHO05D004864 1.4e-43 181.0 285 41.8
Gohir.A06G000101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 7.4e-42 175.3 93 91.4
Sopen06g018800 Solanum pennellii HOM05D003958 ORTHO05D004864 2.6e-39 166.8 131 67.9
Gohir.D11G349300 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.8e-38 162.9 123 66.7
Gorai.004G293900 Gossypium raimondii HOM05D003958 ORTHO05D004864 5.0e-38 162.5 123 66.7
PRCOL_00006622 Prasinoderma coloniale HOM05D003958 ORTHO05D004864 5.0e-38 162.5 318 34.9
Eucgr.L02705 Eucalyptus grandis HOM05D003958 ORTHO05D004864 8.5e-38 161.8 171 55.0
Gohir.D08G275428 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.9e-37 160.6 123 65.9
Gohir.D09G250100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 4.2e-37 159.5 118 68.6
Gohir.A01G232100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 5.5e-37 159.1 121 66.9
Gohir.D03G178200 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.1e-36 157.1 118 66.9
Gorai.N017600 Gossypium raimondii HOM05D003958 ORTHO05D004864 4.7e-36 156.0 124 62.9
Gohir.D01G222101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.4e-35 154.5 118 66.9
Gorai.007G380200 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.8e-35 154.1 116 68.1
Gorai.006G274500 Gossypium raimondii HOM05D003958 ORTHO05D004864 7.4e-34 148.7 78 89.7
Gohir.A12G000201 Gossypium hirsutum HOM05D003958 ORTHO05D004864 4.5e-31 139.4 266 41.4
Ah.07g203280 Amaranthus hybridus HOM05D003958 ORTHO05D004864 2.9e-30 136.7 165 49.1
Haze_26162 Corylus avellana HOM05D003958 ORTHO05D004864 2.9e-30 136.7 278 34.5
Gohir.1Z049515 Gossypium hirsutum HOM05D003958 ORTHO05D015143 1.6e-28 131.0 102 64.7
Gorai.006G275300 Gossypium raimondii HOM05D003958 ORTHO05D015143 2.0e-26 124.0 102 61.8
Gohir.A09G249500 Gossypium hirsutum HOM05D003958 ORTHO05D004864 4.5e-23 112.8 64 87.5
Gohir.1Z049410 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.0e-22 111.7 64 87.5
CSS0019434 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 8.5e-22 108.6 130 52.3
Nitab4.5_0001556g0020 Nicotiana tabacum HOM05D003958 ORTHO05D004864 7.2e-21 105.5 81 66.7
Gorai.001G000100 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.2e-20 104.8 84 63.1
FAN14G4368 Fragaria x ananassa HOM05D000001 ORTHO05D000003 6.1e-20 102.4 157 42.0
BcaC01g04875 Brassica carinata HOM05D003958 ORTHO05D004864 2.3e-19 100.5 234 35.5
FAN05G2311 Fragaria x ananassa HOM05D003958 ORTHO05D004864 4.5e-15 86.3 86 55.8
FAN05G2568 Fragaria x ananassa HOM05D003958 ORTHO05D004864 2.3e-11 73.9 86 52.3
Atru.chr6.2248 Acer truncatum HOM05D003958 ORTHO05D004864 6.8e-11 72.4 73 54.8
BcaC03g13467 Brassica carinata HOM05D002486 ORTHO05D002606 8.9e-11 72.0 119 40.3
Gohir.D11G176600 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.9e-09 67.0 92 44.6
AL4G39060 Arabidopsis lyrata HOM05D000001 ORTHO05D009069 6.3e-09 65.9 89 44.9
Gohir.D07G000766 Gossypium hirsutum HOM05D003958 ORTHO05D004864 8.3e-09 65.5 92 44.6
Gorai.013G272500 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.8e-08 64.3 92 44.6
Medtr2g014570 Medicago truncatula HOM05D003958 ORTHO05D004864 1.8e-08 64.3 69 59.4
Gorai.007G000600 Gossypium raimondii HOM05D001392 ORTHO05D014312 9.2e-08 62.0 78 43.6
Gohir.D08G275100 Gossypium hirsutum HOM05D003958 ORTHO05D005872 1.3e-06 58.2 31 83.9
Gorai.N025700 Gossypium raimondii HOM05D003958 ORTHO05D005872 1.3e-06 58.2 31 83.9
Gohir.A02G000100 Gossypium hirsutum HOM05D003958 ORTHO05D005454 2.9e-06 57.0 29 82.8
Gohir.1Z049564 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.9e-06 56.6 31 80.6
Gohir.1Z049570 Gossypium hirsutum HOM05D003958 ORTHO05D005872 3.9e-06 56.6 31 80.6


User provided reference genes

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