Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35046 Davidia involucrata HOM05D003615 ORTHO05D004858 2.4e-148 528.9 277 100.0
Rhsim10G0023500 Rhododendron simsii HOM05D003615 ORTHO05D004858 1.4e-76 290.4 327 52.3
Hma1.2p1_0697F.1_g204790 Hydrangea macrophylla HOM05D003615 ORTHO05D004858 2.7e-75 286.2 264 62.1
Rhsim10G0023900 Rhododendron simsii HOM05D003615 ORTHO05D004858 2.7e-75 286.2 327 51.4
Thecc.04G007200 Theobroma cacao HOM05D003615 ORTHO05D004858 2.9e-69 266.2 260 60.0
TAR629G2286 Trochodendron aralioides HOM05D003615 ORTHO05D004858 4.9e-69 265.4 326 50.3
Duzib147G1418 Durio zibethinus HOM05D003615 ORTHO05D004858 1.9e-68 263.5 259 58.7
GSVIVG01004279001 Vitis vinifera HOM05D003615 ORTHO05D004858 2.5e-68 263.1 250 57.2
Potri.006G262900 Populus trichocarpa HOM05D003615 ORTHO05D004858 2.1e-67 260.0 257 56.0
TAR629G1076 Trochodendron aralioides HOM05D003615 ORTHO05D004858 2.1e-67 260.0 325 49.2
COL.COLO4_04783 Corchorus olitorius HOM05D003615 ORTHO05D004858 5.0e-61 238.8 230 59.1
TAR374G0689 Trochodendron aralioides HOM05D003615 ORTHO05D004858 3.2e-60 236.1 265 52.1
Sabra06G0205200 Salix brachista HOM05D000330 ORTHO05D004858 5.5e-60 235.3 257 51.8
Gorai.012G060600 Gossypium raimondii HOM05D003615 ORTHO05D004858 6.3e-56 221.9 263 51.0
Gohir.A05G360200 Gossypium hirsutum HOM05D003615 ORTHO05D004858 1.8e-55 220.3 264 50.8
Gohir.D04G054000 Gossypium hirsutum HOM05D003615 ORTHO05D004858 3.1e-55 219.5 263 51.0
Atru.chr6.2153 Acer truncatum HOM05D003615 ORTHO05D004858 2.5e-52 209.9 270 47.8
Eucgr.I01825 Eucalyptus grandis HOM05D003615 ORTHO05D004858 2.1e-51 206.8 230 52.2
PGR119G0743 Punica granatum HOM05D003615 ORTHO05D004858 2.4e-47 193.4 235 47.7
Haze_12144 Corylus avellana HOM05D003615 ORTHO05D004858 1.1e-44 184.5 272 42.6
Nn4g22826 Nelumbo nucifera HOM05D003615 ORTHO05D004858 1.4e-44 184.1 244 46.7
QL03p061743 Quercus lobata HOM05D003615 ORTHO05D004858 5.5e-44 182.2 267 42.3
Ciclev10001867m.g Citrus clementina HOM05D003615 ORTHO05D004858 1.2e-43 181.0 214 50.5
Duzib268G1684 Durio zibethinus HOM05D003615 ORTHO05D004858 7.9e-43 178.3 315 39.7
ClCG10G014370 Citrullus lanatus HOM05D003615 ORTHO05D004858 1.4e-42 177.6 226 44.2
CsaV3_3G042230 Cucumis sativus L. HOM05D003615 ORTHO05D004858 1.4e-42 177.6 231 42.9
QL03p061749 Quercus lobata HOM05D003615 ORTHO05D004858 1.4e-42 177.6 284 42.3
CsaV3_3G042210 Cucumis sativus L. HOM05D003615 ORTHO05D004858 1.8e-42 177.2 282 39.4
MELO3C009942.2 Cucumis melo HOM05D003615 ORTHO05D004858 3.9e-42 176.0 256 41.4
Duzib268G1044 Durio zibethinus HOM05D003615 ORTHO05D004858 4.4e-41 172.6 257 42.4
QL03p061724 Quercus lobata HOM05D003615 ORTHO05D004858 5.7e-41 172.2 265 41.9
Cfa009107 Carpinus fangiana HOM05D003615 ORTHO05D004858 7.4e-41 171.8 269 40.9
MELO3C009943.2 Cucumis melo HOM05D003615 ORTHO05D004858 7.4e-41 171.8 281 37.7
Eucgr.I01826 Eucalyptus grandis HOM05D003615 ORTHO05D004858 2.2e-40 170.2 234 45.7
Atru.chr11.2003 Acer truncatum HOM05D003615 ORTHO05D004858 4.8e-40 169.1 260 40.0
CiPaw.05G146700 Carya illinoinensis HOM05D003615 ORTHO05D004858 6.3e-40 168.7 234 44.4
Aqoxy3G03028 Aquilegia oxysepala HOM05D003615 ORTHO05D004858 3.1e-39 166.4 235 45.1
Thecc.02G244900 Theobroma cacao HOM05D003615 ORTHO05D004858 9.1e-39 164.9 266 40.6
Sed0019217 Sechium edule HOM05D003615 ORTHO05D004858 2.0e-38 163.7 236 41.1
ClCG10G014380 Citrullus lanatus HOM05D003615 ORTHO05D004858 3.5e-38 162.9 282 37.2
Eucgr.B03352 Eucalyptus grandis HOM05D003615 ORTHO05D004858 7.7e-38 161.8 262 38.9
COL.COLO4_36979 Corchorus olitorius HOM05D003615 ORTHO05D004858 3.8e-37 159.5 256 40.2
Duzib251G0695 Durio zibethinus HOM05D003615 ORTHO05D004858 1.2e-35 154.5 256 39.8
Eucgr.B03351 Eucalyptus grandis HOM05D003615 ORTHO05D004858 3.6e-35 152.9 223 41.7
Actinidia15034 Actinidia chinensis HOM05D003615 ORTHO05D004858 2.3e-34 150.2 214 44.4
Prupe.1G255700 Prunus persica HOM05D003615 ORTHO05D004858 6.7e-34 148.7 276 38.4
Rhsim12G0121500 Rhododendron simsii HOM05D002725 ORTHO05D003279 5.7e-33 145.6 249 42.2
TAR622G0247 Trochodendron aralioides HOM05D003615 ORTHO05D004858 2.8e-32 143.3 254 40.2
Phvul.003G052700 Phaseolus vulgaris HOM05D003615 ORTHO05D004858 1.1e-31 141.4 266 34.6
Glyma.18G137000 Glycine max HOM05D003615 ORTHO05D004858 3.1e-31 139.8 277 34.7
TAR622G1321 Trochodendron aralioides HOM05D003615 ORTHO05D004858 7.0e-31 138.7 254 39.8
Atru.chr6.2186 Acer truncatum HOM05D003615 ORTHO05D004858 3.5e-30 136.3 192 46.9
CANSAT01G1820 Cannabis sativa HOM05D003615 ORTHO05D004858 2.2e-29 133.7 264 37.9
RcHm_v2.0_Chr4g0444081 Rosa chinensis HOM05D003615 ORTHO05D004858 1.5e-28 131.0 261 36.4
Glyma.08G134200 Glycine max HOM05D003615 ORTHO05D004858 3.2e-28 129.8 222 41.9
FAN22G1692 Fragaria x ananassa HOM05D003615 ORTHO05D004858 4.2e-28 129.4 272 34.2
FAN17G0861 Fragaria x ananassa HOM05D003615 ORTHO05D004858 1.2e-27 127.9 267 36.3
CiPaw.06G074200 Carya illinoinensis HOM05D003615 ORTHO05D004858 2.1e-27 127.1 303 36.3
Psat4g124720 Pisum sativum HOM05D003615 ORTHO05D004858 2.1e-27 127.1 235 37.0
C05p23050 Brassica napus HOM05D003615 ORTHO05D004858 3.6e-27 126.3 299 33.1
FAN22G0583 Fragaria x ananassa HOM05D003615 ORTHO05D004858 3.6e-27 126.3 267 36.3
RcHm_v2.0_Chr3g0476381 Rosa chinensis HOM05D003615 ORTHO05D004858 3.6e-27 126.3 249 37.3
FvH4_4g34740 Fragaria vesca HOM05D003615 ORTHO05D004858 1.0e-26 124.8 238 35.7
Prupe.1G255400 Prunus persica HOM05D003615 ORTHO05D004858 1.4e-26 124.4 266 36.1
Sed0025994 Sechium edule HOM05D000122 ORTHO05D000139 2.3e-26 123.6 198 39.9
FvH4_4g34710 Fragaria vesca HOM05D003615 ORTHO05D004858 3.0e-26 123.2 267 34.8
FAN12G0428 Fragaria x ananassa HOM05D003615 ORTHO05D004858 5.2e-26 122.5 267 34.8
FAN14G2568 Fragaria x ananassa HOM05D003615 ORTHO05D004858 5.2e-26 122.5 223 40.4
MD16G1090600 Malus domestica HOM05D003615 ORTHO05D004858 5.2e-26 122.5 273 32.6
FAN07G2164 Fragaria x ananassa HOM05D003615 ORTHO05D004858 8.8e-26 121.7 244 34.8
FAN12G2508 Fragaria x ananassa HOM05D003615 ORTHO05D004858 8.8e-26 121.7 241 34.4
Medtr8g063930 Medicago truncatula HOM05D003615 ORTHO05D004858 1.2e-25 121.3 223 38.6
VMungo0251G0576 Vigna mungo HOM05D003615 ORTHO05D004858 1.5e-25 120.9 267 34.5
FvH4_6g20500 Fragaria vesca HOM05D003615 ORTHO05D004858 2.0e-25 120.6 223 39.9
FAN02G2149 Fragaria x ananassa HOM05D003615 ORTHO05D004858 5.7e-25 119.0 234 38.5
MD13G1090000 Malus domestica HOM05D003615 ORTHO05D004858 9.8e-25 118.2 224 33.5
VMungo0251G2176 Vigna mungo HOM05D003615 ORTHO05D004858 1.3e-24 117.9 217 40.6
RcHm_v2.0_Chr4g0444101 Rosa chinensis HOM05D003615 ORTHO05D004858 1.7e-24 117.5 238 35.3
FAN14G3971 Fragaria x ananassa HOM05D003615 ORTHO05D004858 2.2e-24 117.1 208 40.4
Lj4g0014300 Lotus japonicus HOM05D003615 ORTHO05D004858 2.2e-24 117.1 270 34.1
Prupe.1G255600 Prunus persica HOM05D003615 ORTHO05D004858 2.8e-24 116.7 233 37.3
BraA09t39593Z Brassica rapa HOM05D003615 ORTHO05D004858 4.8e-24 115.9 253 34.0
Phvul.002G257500 Phaseolus vulgaris HOM05D003615 ORTHO05D004858 4.8e-24 115.9 220 40.0
Psat7g055960 Pisum sativum HOM05D003615 ORTHO05D004858 4.8e-24 115.9 232 40.5
C05p23000 Brassica napus HOM05D003615 ORTHO05D004858 1.1e-23 114.8 255 35.3
Glyma.08G288200 Glycine max HOM05D003615 ORTHO05D004858 1.1e-23 114.8 218 35.8
BcaC05g26288 Brassica carinata HOM05D003615 ORTHO05D004858 2.4e-23 113.6 258 34.9
A09p40990 Brassica napus HOM05D003615 ORTHO05D004858 3.1e-23 113.2 199 36.7
Sc18g0001840 Simmondsia chinensis HOM05D003615 ORTHO05D004858 3.1e-23 113.2 200 42.0
Sp1g21200 Schrenkiella parvula HOM05D003615 ORTHO05D004858 4.1e-23 112.8 250 34.0
Lj4g0011563 Lotus japonicus HOM05D003615 ORTHO05D004858 5.4e-23 112.5 213 39.4
Medtr1g060280 Medicago truncatula HOM05D003615 ORTHO05D004858 5.4e-23 112.5 267 34.1
FAN16G0215 Fragaria x ananassa HOM05D003615 ORTHO05D004858 7.0e-23 112.1 251 33.9
arahy.Tifrunner.gnm1.ann1.1EVC3W Arachis hypogaea HOM05D003615 ORTHO05D004858 9.1e-23 111.7 222 37.8
BolC5t30999H Brassica oleracea HOM05D003615 ORTHO05D004858 9.1e-23 111.7 311 30.9
FvH4_3g33230 Fragaria vesca HOM05D003615 ORTHO05D004858 9.1e-23 111.7 222 36.0
AL1G37580 Arabidopsis lyrata HOM05D003615 ORTHO05D004858 1.6e-22 110.9 257 32.7
arahy.Tifrunner.gnm1.ann1.2199FB Arachis hypogaea HOM05D003615 ORTHO05D004858 1.6e-22 110.9 221 38.0
BcaB07g32357 Brassica carinata HOM05D003615 ORTHO05D004858 2.7e-22 110.2 252 34.5
TPR.G6213 Trifolium pratense HOM05D003615 ORTHO05D004858 2.7e-22 110.2 217 38.7
Lj4g0013299 Lotus japonicus HOM05D003615 ORTHO05D004858 3.5e-22 109.8 243 39.9
Ah.03g132550 Amaranthus hybridus HOM05D003615 ORTHO05D004858 5.9e-22 109.0 239 32.2
TPR.G29246 Trifolium pratense HOM05D003615 ORTHO05D004858 5.9e-22 109.0 226 34.5
AUR62014008 Chenopodium quinoa HOM05D002682 ORTHO05D002878 7.7e-22 108.6 226 35.8
AT1G23830 Arabidopsis thaliana HOM05D003615 ORTHO05D004858 1.3e-21 107.8 252 32.9
FAN05G3998 Fragaria x ananassa HOM05D003615 ORTHO05D004858 1.3e-21 107.8 191 40.8
AT1G23840 Arabidopsis thaliana HOM05D003615 ORTHO05D004858 1.7e-21 107.5 271 33.2
Carub.0001s2334 Capsella rubella HOM05D003615 ORTHO05D004858 1.7e-21 107.5 260 32.3
Eucgr.B03353 Eucalyptus grandis HOM05D003615 ORTHO05D015110 2.2e-21 107.1 222 33.8
CARHR024230 Cardamine hirsuta HOM05D003615 ORTHO05D004858 5.0e-21 105.9 252 32.1
AUR62005356 Chenopodium quinoa HOM05D003615 ORTHO05D004858 5.0e-21 105.9 148 40.5
FvH4_6g20520 Fragaria vesca HOM05D003615 ORTHO05D004858 5.0e-21 105.9 198 38.9
BraA07t29125Z Brassica rapa HOM05D003615 ORTHO05D004858 6.5e-21 105.5 251 30.7
BcaB03g14133 Brassica carinata HOM05D003615 ORTHO05D004858 1.5e-20 104.4 248 31.9
CARHR024240 Cardamine hirsuta HOM05D003615 ORTHO05D004858 1.9e-20 104.0 258 32.6
Ah.03g132560 Amaranthus hybridus HOM05D003615 ORTHO05D004858 3.2e-20 103.2 211 31.8
Gorai.012G171300 Gossypium raimondii HOM05D003615 ORTHO05D004858 4.2e-20 102.8 264 32.2
Gohir.A04G135100 Gossypium hirsutum HOM05D003615 ORTHO05D004858 5.5e-20 102.4 266 33.5
A07p13760 Brassica napus HOM05D003615 ORTHO05D004858 7.2e-20 102.1 250 30.8
AT1G23850 Arabidopsis thaliana HOM05D003615 ORTHO05D004858 9.5e-20 101.7 271 32.5
CARHR024250 Cardamine hirsuta HOM05D003615 ORTHO05D004858 9.5e-20 101.7 195 36.4
Thhalv10009999m.g Eutrema salsugineum HOM05D003615 ORTHO05D004858 1.2e-19 101.3 248 31.9
BcaC06g35055 Brassica carinata HOM05D003615 ORTHO05D004858 1.6e-19 100.9 251 31.5
Gohir.D04G178200 Gossypium hirsutum HOM05D003615 ORTHO05D004858 1.6e-19 100.9 265 32.1
Lalb_Chr07g0185251 Lupinus albus HOM05D003615 ORTHO05D004858 1.6e-19 100.9 119 47.9
AUR62005358 Chenopodium quinoa HOM05D003615 ORTHO05D004858 2.1e-19 100.5 230 37.4
C07p20230 Brassica napus HOM05D003615 ORTHO05D004858 2.8e-19 100.1 251 31.1
AL1G37600 Arabidopsis lyrata HOM05D003615 ORTHO05D004858 3.6e-19 99.8 271 31.0
BolC7t42544H Brassica oleracea HOM05D003615 ORTHO05D004858 3.6e-19 99.8 251 30.7
COL.COLO4_36978 Corchorus olitorius HOM05D003615 ORTHO05D004858 3.6e-19 99.8 117 43.6
Dinv24874 Davidia involucrata HOM05D003615 ORTHO05D004858 3.6e-19 99.8 108 54.6
THA.LOC104822136 Tarenaya hassleriana HOM05D003615 ORTHO05D004858 8.0e-19 98.6 259 30.1
PGR142G2932 Punica granatum HOM05D003615 ORTHO05D004858 1.4e-18 97.8 108 50.9
EL10Ac6g13654 Beta vulgaris HOM05D003615 ORTHO05D004858 5.2e-18 95.9 116 49.1
Thhalv10008195m.g Eutrema salsugineum HOM05D003615 ORTHO05D004858 5.2e-18 95.9 249 32.5
FAN17G1254 Fragaria x ananassa HOM05D003615 ORTHO05D022686 6.8e-18 95.5 291 29.9
Carub.0001s2333 Capsella rubella HOM05D003615 ORTHO05D004858 2.0e-17 94.0 227 30.8
Eucgr.L03458 Eucalyptus grandis HOM05D003615 ORTHO05D004858 4.4e-17 92.8 203 33.5
CANSAT01G3275 Cannabis sativa HOM05D003615 ORTHO05D004858 1.3e-16 91.3 186 34.9
CiPaw.06G074300 Carya illinoinensis HOM05D003615 ORTHO05D004858 2.2e-16 90.5 294 32.0
AUR62014009 Chenopodium quinoa HOM05D003615 ORTHO05D004858 2.8e-16 90.1 123 38.2
FAN09G2044 Fragaria x ananassa HOM05D003615 ORTHO05D004858 3.7e-16 89.7 268 30.6
Rhsim10G0024000 Rhododendron simsii HOM05D003615 ORTHO05D004858 4.9e-16 89.4 148 39.9
C07p20220 Brassica napus HOM05D003615 ORTHO05D004858 1.8e-15 87.4 245 31.4
Duzib251G0647 Durio zibethinus HOM05D003615 ORTHO05D004858 1.8e-15 87.4 104 44.2
Hund05979 Selenicereus undatus HOM05D003615 ORTHO05D004858 7.0e-15 85.5 195 33.3
BcaC06g35057 Brassica carinata HOM05D003615 ORTHO05D004858 2.3e-13 80.5 206 31.6
MD16G1090500 Malus domestica HOM05D003615 ORTHO05D004858 8.6e-13 78.6 89 46.1
Prupe.1G255800 Prunus persica HOM05D003615 ORTHO05D015110 1.5e-12 77.8 115 36.5
FvH4_4g34730 Fragaria vesca HOM05D003615 ORTHO05D022686 9.5e-12 75.1 200 33.5
FAN07G1344 Fragaria x ananassa HOM05D003615 ORTHO05D015110 9.5e-12 75.1 272 29.0
MD16G1090300 Malus domestica HOM05D003615 ORTHO05D015110 9.5e-12 75.1 208 28.4
AL1G37590 Arabidopsis lyrata HOM05D003615 ORTHO05D004858 1.2e-11 74.7 114 37.7
FvH4_4g34760 Fragaria vesca HOM05D003615 ORTHO05D015110 4.7e-11 72.8 268 25.7
AUR62014010 Chenopodium quinoa HOM05D003615 ORTHO05D004858 6.1e-11 72.4 233 32.6
TAR374G0412 Trochodendron aralioides HOM05D002682 ORTHO05D002878 6.1e-11 72.4 160 33.8
BcaB07g32359 Brassica carinata HOM05D003615 ORTHO05D004858 8.0e-11 72.0 244 30.7
FAN12G4087 Fragaria x ananassa HOM05D003615 ORTHO05D015110 1.4e-10 71.2 265 25.7
FAN22G2348 Fragaria x ananassa HOM05D003615 ORTHO05D015110 1.4e-10 71.2 111 36.9
BcaC05g26284 Brassica carinata HOM05D003615 ORTHO05D004858 2.3e-10 70.5 114 40.4
FAN17G2106 Fragaria x ananassa HOM05D003615 ORTHO05D015110 4.0e-10 69.7 220 31.4
FAN17G2861 Fragaria x ananassa HOM05D003615 ORTHO05D015110 6.8e-10 68.9 269 26.0
Duzib187G1117 Durio zibethinus HOM05D003615 ORTHO05D004858 8.9e-10 68.6 146 37.0
Eucgr.B03350 Eucalyptus grandis HOM05D003615 ORTHO05D004858 2.0e-09 67.4 225 28.0
FvH4_4g34761 Fragaria vesca HOM05D003615 ORTHO05D015110 2.0e-09 67.4 218 29.8
FAN11G0954 Fragaria x ananassa HOM05D003615 ORTHO05D004858 2.0e-09 67.4 70 45.7
FAN12G3114 Fragaria x ananassa HOM05D003615 ORTHO05D015110 2.0e-09 67.4 218 29.8
RcHm_v2.0_Chr4g0444091 Rosa chinensis HOM05D003615 ORTHO05D022686 7.5e-09 65.5 210 30.5
Thecc.02G244700 Theobroma cacao HOM05D003615 ORTHO05D004858 9.8e-09 65.1 85 38.8
Medtr8g090020 Medicago truncatula HOM05D003615 ORTHO05D004858 2.9e-08 63.5 141 37.6
TAR626G1729 Trochodendron aralioides HOM05D004960 ORTHO05D004696 6.4e-08 62.4 236 28.4
AUR62005357 Chenopodium quinoa HOM05D003615 ORTHO05D004858 8.3e-08 62.0 222 28.4
FAN07G0013 Fragaria x ananassa HOM05D003615 ORTHO05D015110 1.4e-07 61.2 111 36.0
MD16G1090400 Malus domestica HOM05D003615 ORTHO05D015110 5.4e-07 59.3 213 27.7
BolC5t31001H Brassica oleracea HOM05D003615 ORTHO05D016696 9.2e-07 58.5 81 33.3
COL.COLO4_16060 Corchorus olitorius HOM05D004960 ORTHO05D004696 5.9e-06 55.8 225 28.0


User provided reference genes

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