Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35029 Davidia involucrata HOM05D021183 ORTHO05D016419 2.2e-96 355.9 223 100.0
Migut.K01359 Erythranthe guttata HOM05D021183 ORTHO05D016419 3.3e-15 86.3 150 49.3
CSS0027129 Camellia sinensis var. sinensis HOM05D021183 ORTHO05D016419 1.9e-10 70.5 61 55.7
MD17G1039400 Malus domestica HOM05D000270 ORTHO05D016419 7.1e-10 68.6 159 49.1
CiPaw.03G035100 Carya illinoinensis HOM05D000270 ORTHO05D000163 3.5e-09 66.2 235 32.8
Cc07_g02550 Coffea canephora HOM05D021183 ORTHO05D016419 4.6e-09 65.9 158 53.8
Actinidia33973 Actinidia chinensis HOM05D021183 ORTHO05D016419 2.3e-08 63.5 60 50.0
Eucgr.J02174 Eucalyptus grandis HOM05D000270 ORTHO05D000163 5.1e-08 62.4 224 35.7
FAN05G2150 Fragaria x ananassa HOM05D000270 ORTHO05D000163 2.5e-07 60.1 150 27.3
AUR62032096 Chenopodium quinoa HOM05D000270 ORTHO05D000163 3.3e-07 59.7 149 28.2
Ciclev10012786m.g Citrus clementina HOM05D000270 ORTHO05D000163 5.7e-07 58.9 150 27.3
TAR374G0559 Trochodendron aralioides HOM05D000270 ORTHO05D000163 7.4e-07 58.5 107 54.2
TAR374G1697 Trochodendron aralioides HOM05D000270 ORTHO05D000163 7.4e-07 58.5 107 54.2
EL10Ac2g03379 Beta vulgaris HOM05D000270 ORTHO05D000163 1.3e-06 57.8 149 28.2
FAN09G1638 Fragaria x ananassa HOM05D000270 ORTHO05D000163 1.6e-06 57.4 147 27.2
Rhsim10G0027300 Rhododendron simsii HOM05D034142 ORTHO05D016419 1.6e-06 57.4 146 40.4
Actinidia06040 Actinidia chinensis HOM05D000270 ORTHO05D000163 2.1e-06 57.0 27 81.5
DCAR_013960 Daucus carota HOM05D000270 ORTHO05D000163 2.1e-06 57.0 27 85.2
DCAR_013974 Daucus carota HOM05D007469 ORTHO05D003360 2.1e-06 57.0 27 85.2
Aqoxy3G03088 Aquilegia oxysepala HOM05D000270 ORTHO05D000163 2.8e-06 56.6 224 34.8
MD17G1039200 Malus domestica HOM05D000270 ORTHO05D000163 3.7e-06 56.2 150 26.0
Potri.001G350600 Populus trichocarpa HOM05D000270 ORTHO05D000163 3.7e-06 56.2 148 27.0
BraA03t10009Z Brassica rapa HOM05D005889 ORTHO05D007495 4.8e-06 55.8 27 81.5
Manes.17G119301 Manihot esculenta HOM05D000270 ORTHO05D000163 4.8e-06 55.8 27 81.5
A03p06840 Brassica napus HOM05D005889 ORTHO05D007495 6.3e-06 55.5 27 81.5
C03p07840 Brassica napus HOM05D005889 ORTHO05D007495 6.3e-06 55.5 27 81.5
BolC3t13283H Brassica oleracea HOM05D005889 ORTHO05D007495 6.3e-06 55.5 27 81.5
Ah.10g033540 Amaranthus hybridus HOM05D001690 ORTHO05D002627 8.2e-06 55.1 149 28.2
CiPaw.04G022700 Carya illinoinensis HOM05D000270 ORTHO05D000163 8.2e-06 55.1 257 35.0


User provided reference genes

Program Settings