Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 6.5e-61 237.3 124 100.0
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 2.7e-51 205.3 122 87.7
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 2.7e-51 205.3 120 87.5
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.3e-50 203.0 121 84.3
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.3e-50 203.0 121 84.3
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 2.3e-50 202.2 122 86.9
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 2.5e-49 198.7 116 87.1
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.3e-49 198.4 121 82.6
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 1.1e-47 193.4 116 84.5
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 1.4e-47 193.0 121 82.6
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 4.1e-47 191.4 121 80.2
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 4.1e-47 191.4 121 80.2
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 6.9e-47 190.7 114 84.2
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 3.4e-46 188.3 120 80.8
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 3.4e-46 188.3 120 80.8
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 4.5e-46 188.0 120 80.8
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 4.5e-46 188.0 120 80.8
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 4.5e-46 188.0 115 83.5
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 1.3e-45 186.4 121 80.2
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 1.7e-45 186.0 120 81.7
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 2.2e-45 185.7 120 80.0
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 8.5e-45 183.7 114 80.7
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 1.1e-44 183.3 112 82.1
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 1.4e-44 183.0 115 80.0
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 3.2e-44 181.8 112 83.0
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 4.2e-44 181.4 116 80.2
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 5.5e-44 181.0 112 83.0
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 7.2e-44 180.6 123 74.8
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 7.2e-44 180.6 113 83.2
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.2e-43 179.9 120 80.0
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.2e-43 179.9 120 80.0
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 1.2e-43 179.9 120 76.7
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 1.2e-43 179.9 113 80.5
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 1.6e-43 179.5 121 74.4
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 2.1e-43 179.1 121 76.0
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 2.1e-43 179.1 115 80.9
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 2.1e-43 179.1 113 82.3
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 2.7e-43 178.7 117 78.6
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 2.7e-43 178.7 121 78.5
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 3.6e-43 178.3 121 73.6
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 3.6e-43 178.3 121 74.4
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 3.6e-43 178.3 119 77.3
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 3.6e-43 178.3 112 81.2
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 4.6e-43 177.9 113 79.6
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 4.6e-43 177.9 113 78.8
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 6.1e-43 177.6 122 76.2
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 1.0e-42 176.8 120 74.2
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 1.4e-42 176.4 112 77.7
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 2.3e-42 175.6 121 74.4
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 2.3e-42 175.6 113 78.8
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 3.0e-42 175.3 121 71.1
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 3.9e-42 174.9 120 71.7
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 3.9e-42 174.9 121 74.4
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 5.1e-42 174.5 123 74.0
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 5.1e-42 174.5 113 78.8
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 6.7e-42 174.1 109 80.7
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 8.8e-42 173.7 115 78.3
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 1.1e-41 173.3 121 74.4
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 1.1e-41 173.3 121 73.6
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 1.1e-41 173.3 118 75.4
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 1.5e-41 172.9 115 74.8
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 1.5e-41 172.9 121 74.4
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 4.3e-41 171.4 119 68.9
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 2.8e-40 168.7 116 73.3
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 2.6e-38 162.2 112 73.2
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 3.4e-38 161.8 114 71.1
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 3.4e-38 161.8 119 69.7
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 4.5e-38 161.4 121 71.1
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 7.7e-38 160.6 117 70.9
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 1.7e-37 159.5 109 76.1
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 1.7e-37 159.5 118 69.5
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 2.9e-37 158.7 118 68.6
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.8e-37 158.3 102 78.4
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.2e-36 155.2 116 71.6
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 5.5e-36 154.5 115 67.8
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 7.2e-36 154.1 121 66.1
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 2.1e-35 152.5 121 70.2
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 3.6e-35 151.8 113 64.6
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 1.4e-34 149.8 96 79.2
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.3e-34 149.1 102 76.5
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 3.9e-34 148.3 113 65.5
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 1.1e-33 146.7 94 75.5
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 3.3e-33 145.2 113 68.1
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 4.8e-32 141.4 104 65.4
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 4.8e-32 141.4 104 64.4
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 6.3e-32 141.0 108 67.6
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 1.1e-31 140.2 104 64.4
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 1.1e-31 140.2 121 62.0
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 5.3e-31 137.9 77 90.9
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 3.5e-30 135.2 93 75.3
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 5.0e-29 131.3 118 60.2
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 6.5e-29 131.0 110 60.9
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.1e-28 130.2 77 83.1
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.1e-28 130.2 77 83.1
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.9e-28 129.4 116 62.9
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 1.9e-28 129.4 116 62.9
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 3.2e-28 128.6 113 60.2
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 5.5e-28 127.9 76 85.5
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 9.4e-28 127.1 76 84.2
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 1.6e-27 126.3 92 69.6
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 6.1e-27 124.4 116 60.3
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 6.7e-26 120.9 121 57.0
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 6.7e-26 120.9 123 57.7
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 8.8e-26 120.6 121 57.0
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 2.0e-25 119.4 116 59.5
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 9.7e-25 117.1 111 55.9
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 1.3e-24 116.7 95 65.3
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 7.7e-22 107.5 74 70.3
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 1.7e-21 106.3 107 53.3
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 3.8e-21 105.1 113 50.4
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 6.5e-21 104.4 73 69.9
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 6.5e-21 104.4 73 69.9
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 6.5e-21 104.4 71 70.4
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 8.5e-21 104.0 112 49.1
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 1.5e-20 103.2 71 70.4
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 1.5e-20 103.2 71 70.4
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 1.9e-20 102.8 72 69.4
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 2.5e-20 102.4 59 86.4
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.5e-20 102.4 59 86.4
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 3.2e-20 102.1 73 67.1
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 9.4e-20 100.5 90 64.4
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 1.2e-19 100.1 104 46.2
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 1.2e-17 93.6 80 55.0
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 1.5e-17 93.2 106 43.4
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 4.8e-16 88.2 103 45.6
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 5.0e-13 78.2 95 37.9
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 7.2e-12 74.3 62 61.3
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 6.1e-11 71.2 55 61.8
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.0e-10 70.5 43 81.4
FAN06G1951 Fragaria x ananassa HOM05D006288 ORTHO05D007416 6.3e-08 61.2 116 37.9


User provided reference genes

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