Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 0.0e+00 1132.9 581 100.0
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 5.3e-214 748.0 595 67.2
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 3.3e-200 702.2 598 65.2
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 7.4e-192 674.5 600 62.7
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 2.6e-189 666.0 594 61.8
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 3.9e-185 652.1 595 64.0
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 1.5e-181 640.2 566 62.9
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 4.5e-181 638.6 671 54.5
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 1.1e-179 634.0 555 62.9
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 8.8e-177 624.4 584 59.9
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 1.6e-173 613.6 550 61.5
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 9.4e-171 604.4 546 60.4
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 2.7e-170 602.8 637 55.3
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 1.4e-169 600.5 541 60.1
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 4.0e-169 599.0 596 56.9
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 4.4e-168 595.5 623 55.1
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 3.7e-167 592.4 540 58.7
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 2.4e-166 589.7 593 56.2
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 4.1e-166 589.0 551 57.2
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 5.3e-166 588.6 748 48.0
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 7.7e-165 584.7 576 58.2
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 1.2e-162 577.4 593 55.8
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 5.2e-161 572.0 590 56.6
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 1.5e-160 570.5 559 57.2
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 2.6e-160 569.7 452 67.3
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 3.7e-159 565.8 607 54.4
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 1.8e-158 563.5 525 57.3
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 5.4e-158 562.0 649 51.3
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 2.0e-157 560.1 542 55.4
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.7e-157 559.7 455 66.8
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 6.6e-156 555.1 506 61.5
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 1.1e-155 554.3 623 52.8
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 2.5e-155 553.1 632 52.5
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 5.5e-155 552.0 604 53.6
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 2.8e-154 549.7 559 55.5
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 1.0e-153 547.7 544 54.2
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 1.2e-152 544.3 608 52.5
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 1.7e-151 540.4 535 54.8
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 2.8e-151 539.7 504 59.5
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 1.4e-150 537.3 630 52.7
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 9.2e-150 534.6 521 58.2
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 1.3e-148 530.8 518 56.6
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 3.8e-148 529.3 594 53.7
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 1.4e-145 520.8 596 53.5
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.7e-143 513.8 609 51.4
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 1.7e-143 513.8 609 51.4
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 6.4e-143 511.9 504 57.3
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 3.2e-142 509.6 609 51.2
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 4.1e-142 509.2 512 56.8
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 2.0e-141 506.9 647 48.1
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 3.5e-141 506.1 505 56.8
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 4.6e-141 505.8 706 45.9
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.3e-140 504.2 634 50.3
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 3.9e-140 502.7 578 50.7
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 3.9e-140 502.7 600 51.8
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 3.3e-139 499.6 594 51.2
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 2.8e-138 496.5 571 52.2
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 6.2e-138 495.4 593 51.3
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 4.4e-136 489.2 593 50.6
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 4.9e-135 485.7 557 53.1
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 2.4e-134 483.4 546 52.7
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 5.4e-134 482.3 442 59.7
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 1.9e-131 473.8 559 52.6
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 4.3e-131 472.6 559 52.6
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 9.5e-131 471.5 531 54.6
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 9.5e-131 471.5 550 51.8
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 1.2e-130 471.1 622 46.1
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 3.6e-130 469.5 587 49.2
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 2.3e-129 466.8 541 52.5
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 1.2e-128 464.5 440 60.0
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 2.6e-128 463.4 622 46.1
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 7.5e-128 461.8 483 55.1
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 1.7e-127 460.7 537 51.0
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 3.5e-125 453.0 521 53.6
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 2.1e-122 443.7 554 51.1
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 8.9e-121 438.3 463 54.2
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 6.4e-119 432.2 566 46.6
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 1.9e-118 430.6 551 48.1
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 3.2e-118 429.9 519 50.9
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 2.1e-117 427.2 555 48.8
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.3e-116 424.5 353 64.3
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 2.3e-116 423.7 273 86.1
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 3.9e-116 422.9 438 55.9
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 5.6e-115 419.1 349 64.2
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 1.6e-114 417.5 616 45.1
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 1.6e-114 417.5 465 52.0
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 2.6e-112 410.2 437 51.9
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 7.6e-112 408.7 436 52.1
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.3e-108 397.9 454 50.2
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 5.1e-108 396.0 506 49.4
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 4.0e-105 386.3 388 56.2
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 6.9e-105 385.6 529 47.1
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 6.4e-103 379.0 532 45.9
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 5.4e-102 375.9 547 45.5
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 9.3e-102 375.2 548 46.2
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 3.0e-100 370.2 372 55.1
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 3.7e-98 363.2 533 43.9
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 4.8e-98 362.8 295 62.4
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 8.1e-98 362.1 530 44.3
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 1.4e-97 361.3 530 44.2
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 1.4e-97 361.3 530 44.3
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 3.1e-97 360.1 390 53.1
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 1.2e-96 358.2 530 45.5
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 9.9e-96 355.1 367 54.5
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 1.3e-95 354.8 387 52.5
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 1.3e-95 354.8 387 52.5
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 6.4e-95 352.4 400 51.5
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 8.4e-95 352.1 320 58.1
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.1e-94 351.7 271 70.8
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 1.9e-94 350.9 601 40.6
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 5.5e-94 349.4 383 52.7
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 1.3e-92 344.7 453 45.5
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 2.3e-92 344.0 383 50.4
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 3.0e-92 343.6 371 53.9
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 8.7e-92 342.0 382 52.9
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 1.1e-91 341.7 469 47.3
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 2.5e-91 340.5 377 53.1
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 2.5e-91 340.5 592 42.1
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 2.1e-90 337.4 299 60.2
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 2.1e-90 337.4 520 43.7
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 6.2e-90 335.9 379 52.5
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 6.2e-90 335.9 380 52.4
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 6.2e-90 335.9 379 52.5
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 3.1e-89 333.6 350 54.6
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 6.9e-89 332.4 402 50.2
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 1.1e-86 325.1 380 49.7
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 3.2e-86 323.6 489 43.4
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 2.7e-85 320.5 278 58.6
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 7.9e-85 318.9 238 72.7
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 3.9e-84 316.6 252 67.9
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 6.7e-84 315.8 357 52.4
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 8.2e-82 308.9 357 49.0
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 7.9e-77 292.4 318 53.5
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 6.9e-73 279.3 300 51.3
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 4.2e-62 243.4 312 46.5
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 1.4e-60 238.4 466 37.3
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 5.2e-60 236.5 269 52.0
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 1.7e-55 221.5 156 71.2
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 3.6e-53 213.8 592 32.3
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 4.0e-52 210.3 220 52.7
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 2.7e-48 197.6 276 43.5
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 9.4e-46 189.1 170 56.5
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 4.0e-44 183.7 454 34.1
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 3.5e-40 170.6 235 47.2
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 3.0e-36 157.5 356 34.8
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 9.2e-33 146.0 219 43.8
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 5.6e-30 136.7 233 36.1
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 1.5e-27 128.6 201 39.3
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 1.3e-23 115.5 345 29.9
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 5.2e-12 77.0 42 83.3
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 9.9e-11 72.8 78 48.7
Duzib268G0244 Durio zibethinus HOM05D002617 ORTHO05D006076 1.1e-09 69.3 141 36.2
CDE03G0290 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 1.9e-09 68.6 184 28.3
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 2.4e-09 68.2 52 59.6


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