Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 2.2e-45 185.3 94 100.0
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 8.1e-40 166.8 94 88.3
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 1.1e-39 166.4 94 86.2
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 3.1e-39 164.9 94 86.2
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 3.1e-39 164.9 90 90.0
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 3.4e-38 161.4 94 87.2
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 7.6e-38 160.2 94 83.0
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 9.9e-38 159.8 94 86.2
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 1.3e-37 159.5 94 83.0
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 1.3e-37 159.5 94 84.0
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 1.7e-37 159.1 94 81.9
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 2.2e-37 158.7 94 81.9
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 3.8e-37 157.9 94 79.8
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 4.9e-37 157.5 86 89.5
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 8.4e-37 156.8 90 84.4
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 8.4e-37 156.8 94 81.9
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 1.1e-36 156.4 90 84.4
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 1.1e-36 156.4 94 80.9
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 1.1e-36 156.4 88 85.2
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 1.1e-36 156.4 90 84.4
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 1.9e-36 155.6 86 88.4
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 2.4e-36 155.2 89 83.1
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 2.4e-36 155.2 94 78.7
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 2.4e-36 155.2 94 78.7
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 2.4e-36 155.2 94 79.8
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 2.4e-36 155.2 88 86.4
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 3.2e-36 154.8 94 79.8
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 4.2e-36 154.5 94 81.9
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 7.1e-36 153.7 93 81.7
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 7.1e-36 153.7 94 78.7
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 9.3e-36 153.3 94 79.8
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 9.3e-36 153.3 94 79.8
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 9.3e-36 153.3 94 78.7
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 1.2e-35 152.9 94 80.9
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 1.6e-35 152.5 93 77.4
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 1.6e-35 152.5 93 82.8
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 1.6e-35 152.5 89 84.3
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 3.5e-35 151.4 94 77.7
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 3.5e-35 151.4 90 82.2
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 3.5e-35 151.4 88 84.1
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 4.6e-35 151.0 89 80.9
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 4.6e-35 151.0 88 84.1
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 4.6e-35 151.0 94 79.8
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 4.6e-35 151.0 92 77.2
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 7.9e-35 150.2 90 82.2
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 1.0e-34 149.8 89 82.0
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 1.0e-34 149.8 93 78.5
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 1.3e-34 149.4 92 77.2
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.3e-34 149.4 92 77.2
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.3e-34 149.4 92 77.2
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 1.3e-34 149.4 93 78.5
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 1.8e-34 149.1 94 79.8
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 2.3e-34 148.7 91 79.1
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 3.0e-34 148.3 94 76.6
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 3.0e-34 148.3 82 85.4
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 3.9e-34 147.9 88 80.7
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 3.9e-34 147.9 89 79.8
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 5.1e-34 147.5 89 80.9
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 5.1e-34 147.5 88 81.8
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 1.1e-33 146.4 94 75.5
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 1.5e-33 146.0 88 78.4
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 1.9e-33 145.6 94 75.5
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 3.3e-33 144.8 88 79.5
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 3.3e-33 144.8 88 79.5
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 4.3e-33 144.4 88 79.5
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 4.3e-33 144.4 88 79.5
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 4.3e-33 144.4 88 79.5
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 4.3e-33 144.4 88 79.5
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 5.6e-33 144.1 84 84.5
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 5.6e-33 144.1 84 82.1
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 9.6e-33 143.3 88 79.5
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 1.3e-32 142.9 88 77.3
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 1.6e-32 142.5 88 78.4
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 1.6e-32 142.5 88 78.4
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 2.1e-32 142.1 86 81.4
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 2.8e-32 141.7 88 78.4
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 4.8e-32 141.0 103 68.9
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 4.8e-32 141.0 94 74.5
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 1.1e-31 139.8 88 76.1
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 1.8e-31 139.0 86 80.2
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 9.0e-31 136.7 88 75.0
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 2.0e-30 135.6 104 65.4
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 3.4e-30 134.8 77 84.4
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 1.3e-29 132.9 126 57.1
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 2.9e-29 131.7 78 84.6
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 3.8e-29 131.3 73 84.9
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 1.2e-27 126.3 69 87.0
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 2.1e-27 125.6 82 74.4
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 2.1e-27 125.6 82 74.4
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 2.3e-26 122.1 71 81.7
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 6.7e-26 120.6 72 77.8
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 6.7e-26 120.6 71 83.1
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.5e-25 119.4 68 83.8
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 2.5e-25 118.6 67 86.6
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 9.6e-25 116.7 139 49.6
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.6e-24 115.9 71 77.5
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 3.7e-24 114.8 71 74.6
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 8.2e-24 113.6 67 79.1
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 4.0e-23 111.3 66 80.3
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 9.0e-23 110.2 71 74.6
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 2.6e-22 108.6 79 60.8
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 1.0e-21 106.7 65 78.5
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 1.3e-21 106.3 81 61.7
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 2.9e-21 105.1 69 69.6
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 1.6e-19 99.4 77 62.3
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 6.3e-16 87.4 65 58.5
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 1.5e-14 82.8 67 62.7
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 2.6e-14 82.0 88 56.8
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 4.5e-14 81.3 45 80.0
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 1.0e-10 70.1 80 43.8
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 6.7e-10 67.4 80 46.2


User provided reference genes

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