Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34795 Davidia involucrata HOM05D003588 ORTHO05D004252 3.7e-127 458.4 255 100.0
CSS0016689 Camellia sinensis var. sinensis HOM05D003588 ORTHO05D004252 1.1e-33 147.9 80 91.2
CSS0025104 Camellia sinensis var. sinensis HOM05D003588 ORTHO05D004252 1.1e-33 147.9 80 91.2
Dinv33964 Davidia involucrata HOM05D003588 ORTHO05D004252 2.4e-33 146.7 80 90.0
vmacro22953 Vaccinium macrocarpon HOM05D003588 ORTHO05D004252 2.4e-33 146.7 80 91.2
CiPaw.04G044200 Carya illinoinensis HOM05D003588 ORTHO05D004252 4.0e-33 146.0 80 87.5
Rhsim10G0072600 Rhododendron simsii HOM05D003588 ORTHO05D004252 4.0e-33 146.0 80 90.0
Nn4g23954 Nelumbo nucifera HOM05D003588 ORTHO05D004252 9.0e-33 144.8 128 61.7
Hund16184 Selenicereus undatus HOM05D003588 ORTHO05D004252 9.0e-33 144.8 80 88.8
QL02p050347 Quercus lobata HOM05D003588 ORTHO05D004252 1.5e-32 144.1 80 87.5
QL04p012047 Quercus lobata HOM05D003588 ORTHO05D004252 1.5e-32 144.1 80 87.5
MSTRG.2778 Avicennia marina HOM05D003588 ORTHO05D004252 2.0e-32 143.7 80 86.2
GSVIVG01030980001 Vitis vinifera HOM05D003588 ORTHO05D004252 2.0e-32 143.7 80 87.5
TAR622G0110 Trochodendron aralioides HOM05D003588 ORTHO05D004252 2.6e-32 143.3 80 87.5
TWI53G1720 Tripterygium wilfordii HOM05D003588 ORTHO05D004252 3.4e-32 142.9 80 87.5
CANSAT78G2002 Cannabis sativa HOM05D003588 ORTHO05D004252 7.6e-32 141.7 80 86.2
SGA_v2.0_scaffold49G18119 Striga asiatica HOM05D003588 ORTHO05D004252 7.6e-32 141.7 103 69.9
Actinidia15898 Actinidia chinensis HOM05D003588 ORTHO05D004252 9.9e-32 141.4 80 87.5
COL.COLO4_09374 Corchorus olitorius HOM05D003588 ORTHO05D004252 9.9e-32 141.4 80 83.8
Atru.chr1.1617 Acer truncatum HOM05D003588 ORTHO05D004252 1.7e-31 140.6 82 87.8
Ca_08090_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 1.7e-31 140.6 101 72.3
ClCG11G007740 Citrullus lanatus HOM05D003588 ORTHO05D004252 1.7e-31 140.6 80 85.0
Medtr7g082650 Medicago truncatula HOM05D003588 ORTHO05D004252 1.7e-31 140.6 80 85.0
Thecc.04G128900 Theobroma cacao HOM05D003588 ORTHO05D004252 1.7e-31 140.6 80 83.8
PGR004G1031 Punica granatum HOM05D003588 ORTHO05D004252 2.9e-31 139.8 80 86.2
TPR.G16544 Trifolium pratense HOM05D003588 ORTHO05D004252 2.9e-31 139.8 80 83.8
Cc07_g08540 Coffea canephora HOM05D003588 ORTHO05D004252 3.8e-31 139.4 80 85.0
Glyma.02G089000 Glycine max HOM05D003588 ORTHO05D004252 3.8e-31 139.4 80 83.8
Oeu050384.1 Olea europaea HOM05D003588 ORTHO05D004252 4.9e-31 139.0 80 82.5
AUR62023267 Chenopodium quinoa HOM05D003588 ORTHO05D004252 6.4e-31 138.7 80 83.8
PSO478G1111 Papaver somniferum HOM05D003588 ORTHO05D004252 6.4e-31 138.7 82 84.1
Ciclev10010937m.g Citrus clementina HOM05D003588 ORTHO05D004252 8.4e-31 138.3 80 83.8
Manes.02G071350 Manihot esculenta HOM05D003588 ORTHO05D004252 8.4e-31 138.3 80 86.2
Cfa007893 Carpinus fangiana HOM05D003588 ORTHO05D004252 1.1e-30 137.9 80 82.5
Duzib133G0570 Durio zibethinus HOM05D003588 ORTHO05D004252 1.1e-30 137.9 80 81.2
Gohir.A07G174400 Gossypium hirsutum HOM05D003588 ORTHO05D004252 1.1e-30 137.9 98 73.5
Phvul.008G008300 Phaseolus vulgaris HOM05D003588 ORTHO05D004252 1.1e-30 137.9 80 82.5
CSS0045616 Camellia sinensis var. sinensis HOM05D003588 ORTHO05D004252 1.4e-30 137.5 80 82.5
Sed0005237 Sechium edule HOM05D003588 ORTHO05D004252 1.4e-30 137.5 80 82.5
EL10Ac2g04530 Beta vulgaris HOM05D003588 ORTHO05D004252 1.9e-30 137.1 80 82.5
Cpa.g.sc170.32 Carica papaya HOM05D003588 ORTHO05D004252 1.9e-30 137.1 109 66.1
Lj1g0020363 Lotus japonicus HOM05D003588 ORTHO05D004252 1.9e-30 137.1 80 82.5
MD09G1255900 Malus domestica HOM05D003588 ORTHO05D004252 1.9e-30 137.1 86 77.9
Prupe.3G148000 Prunus persica HOM05D003588 ORTHO05D004252 1.9e-30 137.1 86 80.2
VMungo1383G2782 Vigna mungo HOM05D003588 ORTHO05D004252 1.9e-30 137.1 80 83.8
FvH4_7g07990 Fragaria vesca HOM05D003588 ORTHO05D004252 2.4e-30 136.7 86 79.1
FAN01G1119 Fragaria x ananassa HOM05D003588 ORTHO05D004252 2.4e-30 136.7 86 79.1
FAN06G2375 Fragaria x ananassa HOM05D003588 ORTHO05D004252 2.4e-30 136.7 86 79.1
FAN10G2177 Fragaria x ananassa HOM05D003588 ORTHO05D004252 2.4e-30 136.7 86 79.1
Lj4C184G4 Lonicera japonica HOM05D003588 ORTHO05D004252 2.4e-30 136.7 80 81.2
Nitab4.5_0000753g0220 Nicotiana tabacum HOM05D003588 ORTHO05D004252 2.4e-30 136.7 79 83.5
CsaV3_2G033840 Cucumis sativus L. HOM05D003588 ORTHO05D004252 3.2e-30 136.3 80 81.2
Potri.004G095900 Populus trichocarpa HOM05D003588 ORTHO05D004252 3.2e-30 136.3 80 83.8
RcHm_v2.0_Chr3g0494131 Rosa chinensis HOM05D003588 ORTHO05D004252 3.2e-30 136.3 86 79.1
Aqoxy3G00200 Aquilegia oxysepala HOM05D003588 ORTHO05D004252 4.2e-30 136.0 82 85.4
AL6G27090 Arabidopsis lyrata HOM05D003588 ORTHO05D004252 4.2e-30 136.0 79 83.5
AT5G16210 Arabidopsis thaliana HOM05D003588 ORTHO05D004252 4.2e-30 136.0 79 83.5
Sopen02g031000 Solanum pennellii HOM05D003588 ORTHO05D004252 4.2e-30 136.0 80 81.2
Duzib138G1780 Durio zibethinus HOM05D003588 ORTHO05D004252 5.4e-30 135.6 97 69.1
Gohir.D07G181700 Gossypium hirsutum HOM05D003588 ORTHO05D004252 5.4e-30 135.6 115 65.2
Gorai.001G202700 Gossypium raimondii HOM05D003588 ORTHO05D004252 5.4e-30 135.6 115 65.2
Sabra04G0065000 Salix brachista HOM05D003588 ORTHO05D004252 5.4e-30 135.6 79 84.8
Carub.0006s1440 Capsella rubella HOM05D003588 ORTHO05D004252 7.1e-30 135.2 79 83.5
MD17G1249900 Malus domestica HOM05D003588 ORTHO05D004252 7.1e-30 135.2 86 77.9
FAN03G2066 Fragaria x ananassa HOM05D003588 ORTHO05D004252 9.3e-30 134.8 86 77.9
Manes.01G112900 Manihot esculenta HOM05D003588 ORTHO05D004252 9.3e-30 134.8 91 74.7
PSO017G4387 Papaver somniferum HOM05D003588 ORTHO05D004252 9.3e-30 134.8 82 80.5
MBI16_g38075_MAGBIO Magnolia biondii HOM05D003588 ORTHO05D004252 1.2e-29 134.4 80 80.0
Aa31LG11G13400 Aethionema arabicum HOM05D003588 ORTHO05D004252 1.6e-29 134.0 79 82.3
ATR0681G242 Amborella trichopoda HOM05D003588 ORTHO05D004252 1.6e-29 134.0 81 79.0
arahy.Tifrunner.gnm1.ann1.JMF5N7 Arachis hypogaea HOM05D003588 ORTHO05D004252 1.6e-29 134.0 79 84.8
arahy.Tifrunner.gnm1.ann1.QJYU1D Arachis hypogaea HOM05D003588 ORTHO05D004252 1.6e-29 134.0 79 84.8
CARHR197100 Cardamine hirsuta HOM05D003588 ORTHO05D004252 1.6e-29 134.0 80 81.2
Nitab4.5_0008521g0020 Nicotiana tabacum HOM05D003588 ORTHO05D004252 2.1e-29 133.7 78 82.1
Eucgr.F02790 Eucalyptus grandis HOM05D003588 ORTHO05D004252 2.7e-29 133.3 80 81.2
Thhalv10012470m.g Eutrema salsugineum HOM05D003588 ORTHO05D004252 2.7e-29 133.3 80 80.0
CDE09G0638 Ceratophyllum demersum HOM05D003588 ORTHO05D004252 7.9e-29 131.7 80 76.2
DCAR_025903 Daucus carota HOM05D003588 ORTHO05D004252 7.9e-29 131.7 92 69.6
Sp6g27950 Schrenkiella parvula HOM05D003588 ORTHO05D004252 7.9e-29 131.7 80 81.2
Psat3g097680 Pisum sativum HOM05D003588 ORTHO05D004252 1.0e-28 131.3 78 84.6
MD17G1249700 Malus domestica HOM05D003588 ORTHO05D004252 1.3e-28 131.0 86 75.6
BcaC03g18474 Brassica carinata HOM05D003588 ORTHO05D004252 1.7e-28 130.6 79 79.7
BcaNung02226 Brassica carinata HOM05D003588 ORTHO05D004252 1.7e-28 130.6 79 79.7
A02p03430 Brassica napus HOM05D003588 ORTHO05D004252 1.7e-28 130.6 79 79.7
C02p08190 Brassica napus HOM05D003588 ORTHO05D004252 1.7e-28 130.6 79 79.7
BolC2t06743H Brassica oleracea HOM05D003588 ORTHO05D004252 1.7e-28 130.6 79 79.7
BraA02t05314Z Brassica rapa HOM05D003588 ORTHO05D004252 1.7e-28 130.6 79 79.7
Ah.10g037630 Amaranthus hybridus HOM05D003588 ORTHO05D004252 2.3e-28 130.2 80 80.0
Gohir.A11G165800 Gossypium hirsutum HOM05D003588 ORTHO05D004252 2.3e-28 130.2 80 76.2
Gohir.D11G172000 Gossypium hirsutum HOM05D003588 ORTHO05D004252 2.3e-28 130.2 80 76.2
Gorai.007G184400 Gossypium raimondii HOM05D003588 ORTHO05D004252 2.3e-28 130.2 80 76.2
THA.LOC104820941 Tarenaya hassleriana HOM05D003588 ORTHO05D004252 2.3e-28 130.2 81 80.2
Lalb_Chr10g0091441 Lupinus albus HOM05D003588 ORTHO05D004252 3.0e-28 129.8 80 80.0
Zm00001eb341840 Zea mays HOM05D003588 ORTHO05D004252 3.0e-28 129.8 79 78.5
unitig_899.g14514 Utricularia gibba HOM05D003588 ORTHO05D004252 1.1e-27 127.9 82 75.6
BcaC04g18898 Brassica carinata HOM05D003588 ORTHO05D004252 1.9e-27 127.1 80 77.5
C09p60810 Brassica napus HOM05D003588 ORTHO05D004252 1.9e-27 127.1 80 77.5
BolC9t58921H Brassica oleracea HOM05D003588 ORTHO05D004252 1.9e-27 127.1 80 77.5
Os01g0514300 Oryza sativa ssp. japonica HOM05D003588 ORTHO05D004252 1.9e-27 127.1 79 75.9
ECA232G2944 Erigeron canadensis HOM05D003588 ORTHO05D004252 1.3e-26 124.4 78 75.6
Haze_14184 Corylus avellana HOM05D003588 ORTHO05D004252 2.8e-26 123.2 105 62.9
Lsat_1_v5_gn_4_155620 Lactuca sativa HOM05D003588 ORTHO05D004252 2.8e-26 123.2 78 74.4
VMungo0464G0444 Vigna mungo HOM05D003588 ORTHO05D004252 3.6e-26 122.9 79 75.9
HanXRQChr09g0262701 Helianthus annuus HOM05D003588 ORTHO05D004252 1.8e-25 120.6 77 74.0
SMO356G0339 Selaginella moellendorffii HOM05D003588 ORTHO05D004252 1.8e-25 120.6 104 60.6
arahy.Tifrunner.gnm1.ann1.SZ4JBM Arachis hypogaea HOM05D003588 ORTHO05D009236 2.4e-25 120.2 76 78.9
Ca_04138_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 3.1e-25 119.8 80 72.5
Glyma.05G002100 Glycine max HOM05D003588 ORTHO05D004252 6.9e-25 118.6 81 72.8
Lj2g0002647 Lotus japonicus HOM05D003588 ORTHO05D004252 9.9e-24 114.8 75 76.0
TPR.G25232 Trifolium pratense HOM05D003588 ORTHO05D004252 2.2e-23 113.6 78 70.5
Phvul.004G002300 Phaseolus vulgaris HOM05D003588 ORTHO05D004252 4.9e-23 112.5 94 63.8
Lalb_Chr06g0176731 Lupinus albus HOM05D003588 ORTHO05D004252 8.4e-23 111.7 128 52.3
arahy.Tifrunner.gnm1.ann1.K3Z2GB Arachis hypogaea HOM05D003588 ORTHO05D004252 2.7e-21 106.7 62 82.3
vmacro05528 Vaccinium macrocarpon HOM05D003588 ORTHO05D004252 2.7e-21 106.7 59 89.8
arahy.Tifrunner.gnm1.ann1.CE0ZIG Arachis hypogaea HOM05D003588 ORTHO05D004252 1.0e-20 104.8 62 80.6
Mapoly0103s0005 Marchantia polymorpha HOM05D003588 ORTHO05D004252 1.8e-20 104.0 70 67.1
Medtr6g004240 Medicago truncatula HOM05D003588 ORTHO05D004252 1.8e-20 104.0 60 81.7
AUR62009038 Chenopodium quinoa HOM05D003588 ORTHO05D004252 6.7e-20 102.1 61 80.3
CAN.G625.55 Capsicum annuum HOM05D003588 ORTHO05D000105 8.7e-20 101.7 60 78.3
Pp3c18_21770 Physcomitrium patens HOM05D003588 ORTHO05D004252 1.6e-18 97.4 77 61.0
A10p22850 Brassica napus HOM05D003588 ORTHO05D004252 2.1e-18 97.1 64 71.9
BraA10t44352Z Brassica rapa HOM05D003588 ORTHO05D004252 2.1e-18 97.1 64 71.9
CDE02G1293 Ceratophyllum demersum HOM05D003588 ORTHO05D004252 1.1e-17 94.7 59 72.9
CDE02G3249 Ceratophyllum demersum HOM05D003588 ORTHO05D004252 5.3e-17 92.4 60 70.0
BcaC03g18481 Brassica carinata HOM05D003588 ORTHO05D004252 1.5e-16 90.9 79 62.0
SEGI_01406 Sequoiadendron giganteum HOM05D003588 ORTHO05D004252 1.0e-15 88.2 56 73.2
Migut.H00238 Erythranthe guttata HOM05D003588 ORTHO05D004252 9.0e-09 65.1 35 85.7
CBR_g34722 Chara braunii HOM05D003588 ORTHO05D004252 1.2e-08 64.7 75 41.3
Pp3c3_38010 Physcomitrium patens HOM05D003588 ORTHO05D004252 4.5e-08 62.8 75 44.0


User provided reference genes

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