Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34743 Davidia involucrata HOM05D006595 ORTHO05D008238 1.0e-59 233.4 133 100.0
Dinv13419 Davidia involucrata HOM05D006595 ORTHO05D008238 5.1e-56 221.1 131 96.9
PGSC0003DMG401032143 Solanum tuberosum HOM05D006595 ORTHO05D008238 3.0e-48 195.3 129 89.1
Atru.chr3.2190 Acer truncatum HOM05D006595 ORTHO05D008238 3.9e-48 194.9 133 85.0
Ciclev10016858m.g Citrus clementina HOM05D006595 ORTHO05D008238 6.7e-48 194.1 129 88.4
Sopen01g002130 Solanum pennellii HOM05D006595 ORTHO05D008238 5.7e-47 191.0 129 87.6
TAR636G1600 Trochodendron aralioides HOM05D006595 ORTHO05D008238 1.3e-46 189.9 131 85.5
CSS0011176 Camellia sinensis var. sinensis HOM05D006595 ORTHO05D008238 2.2e-46 189.1 131 90.8
Manes.03G089200 Manihot esculenta HOM05D006595 ORTHO05D008238 2.2e-46 189.1 129 85.3
Peaxi162Scf00441g00213 Petunia axillaris HOM05D006595 ORTHO05D008238 6.3e-46 187.6 131 84.7
Potri.001G009800 Populus trichocarpa HOM05D006595 ORTHO05D008238 1.1e-45 186.8 129 85.3
Prupe.6G012000 Prunus persica HOM05D006595 ORTHO05D008238 1.4e-45 186.4 133 84.2
Nn7g35969 Nelumbo nucifera HOM05D006595 ORTHO05D008238 1.8e-45 186.0 127 86.6
PGR102G3301 Punica granatum HOM05D006595 ORTHO05D008238 4.1e-45 184.9 131 83.2
Solyc01g006130.4 Solanum lycopersicum HOM05D006595 ORTHO05D008238 4.1e-45 184.9 125 87.2
CsaV3_4G023550 Cucumis sativus L. HOM05D006595 ORTHO05D008238 7.0e-45 184.1 131 82.4
QL01p010272 Quercus lobata HOM05D006595 ORTHO05D008238 7.0e-45 184.1 131 82.4
CAN.G140.24 Capsicum annuum HOM05D006595 ORTHO05D008238 1.5e-44 183.0 131 83.2
MD03G1011600 Malus domestica HOM05D006595 ORTHO05D008238 1.5e-44 183.0 132 83.3
Lj2A706G26 Lonicera japonica HOM05D006595 ORTHO05D008238 2.0e-44 182.6 133 85.0
Sabra01G0007800 Salix brachista HOM05D006595 ORTHO05D008238 2.0e-44 182.6 133 81.2
TWI34G0416 Tripterygium wilfordii HOM05D006595 ORTHO05D008238 2.0e-44 182.6 132 81.8
Cc01_g00990 Coffea canephora HOM05D006595 ORTHO05D008238 3.5e-44 181.8 130 83.8
EL10Ac4g10339 Beta vulgaris HOM05D006595 ORTHO05D008238 5.9e-44 181.0 131 83.2
CiPaw.13G171400 Carya illinoinensis HOM05D006595 ORTHO05D008238 5.9e-44 181.0 132 81.8
FAN17G0104 Fragaria x ananassa HOM05D000005 ORTHO05D000012 5.9e-44 181.0 133 82.7
RcHm_v2.0_Chr5g0081351 Rosa chinensis HOM05D006595 ORTHO05D008238 7.7e-44 180.6 133 82.7
Lj2A705G49 Lonicera japonica HOM05D006595 ORTHO05D008238 1.3e-43 179.9 135 70.4
FAN21G3045 Fragaria x ananassa HOM05D000750 ORTHO05D000714 1.7e-43 179.5 133 82.0
FAN25G3451 Fragaria x ananassa HOM05D000750 ORTHO05D000714 1.7e-43 179.5 133 82.0
SGA_v2.0_scaffold78G25462 Striga asiatica HOM05D006595 ORTHO05D008238 1.7e-43 179.5 129 84.5
Sed0019652 Sechium edule HOM05D006595 ORTHO05D008238 2.2e-43 179.1 131 81.7
ClCG02G023820 Citrullus lanatus HOM05D006595 ORTHO05D008238 3.8e-43 178.3 131 81.7
SalBow6G7140 Salvia bowleyana HOM05D006595 ORTHO05D008238 3.8e-43 178.3 132 81.8
FvH4_3g44681 Fragaria vesca HOM05D006595 ORTHO05D008238 5.0e-43 177.9 133 81.2
MELO3C014661.2 Cucumis melo HOM05D006595 ORTHO05D008238 6.5e-43 177.6 129 82.2
Duzib168G0997 Durio zibethinus HOM05D006595 ORTHO05D008238 1.9e-42 176.0 131 80.9
Rhsim13G0228400 Rhododendron simsii HOM05D000750 ORTHO05D000714 3.2e-42 175.3 130 84.6
Cpa.g.sc119.91 Carica papaya HOM05D006595 ORTHO05D008238 4.2e-42 174.9 132 80.3
Haze_22995 Corylus avellana HOM05D006595 ORTHO05D008238 4.2e-42 174.9 132 80.3
AUR62019207 Chenopodium quinoa HOM05D006595 ORTHO05D008238 5.5e-42 174.5 128 81.2
AUR62000037 Chenopodium quinoa HOM05D006595 ORTHO05D008238 1.2e-41 173.3 131 80.9
MSTRG.208 Avicennia marina HOM05D006595 ORTHO05D008238 1.6e-41 172.9 132 81.1
Cfa009626 Carpinus fangiana HOM05D006595 ORTHO05D008238 1.6e-41 172.9 132 79.5
FAN16G1668 Fragaria x ananassa HOM05D000750 ORTHO05D000714 1.6e-41 172.9 133 79.7
Lj5g0010961 Lotus japonicus HOM05D006595 ORTHO05D008238 2.1e-41 172.6 124 83.1
Phvul.007G006200 Phaseolus vulgaris HOM05D006595 ORTHO05D008238 3.6e-41 171.8 133 78.9
MSTRG.8324 Avicennia marina HOM05D006595 ORTHO05D008238 1.0e-40 170.2 129 82.2
Eucgr.B03632 Eucalyptus grandis HOM05D006595 ORTHO05D008238 1.0e-40 170.2 132 78.8
Gohir.A08G079300 Gossypium hirsutum HOM05D006595 ORTHO05D008238 1.4e-40 169.9 131 76.3
ECA248G3199 Erigeron canadensis HOM05D006595 ORTHO05D008238 1.8e-40 169.5 126 83.3
Gohir.D08G088800 Gossypium hirsutum HOM05D006595 ORTHO05D008238 1.8e-40 169.5 131 76.3
Gorai.007G232900 Gossypium raimondii HOM05D006595 ORTHO05D008238 1.8e-40 169.5 131 76.3
Gohir.A11G206900 Gossypium hirsutum HOM05D006595 ORTHO05D008238 2.3e-40 169.1 131 76.3
GSVIVG01025384001 Vitis vinifera HOM05D006595 ORTHO05D008238 3.0e-40 168.7 132 78.8
Nitab4.5_0005477g0080 Nicotiana tabacum HOM05D006595 ORTHO05D008238 3.9e-40 168.3 133 66.2
Gohir.D11G216800 Gossypium hirsutum HOM05D006595 ORTHO05D008238 6.7e-40 167.5 131 75.6
Gorai.004G093500 Gossypium raimondii HOM05D006595 ORTHO05D008238 6.7e-40 167.5 131 75.6
Aqoxy2G00094 Aquilegia oxysepala HOM05D006595 ORTHO05D008238 8.8e-40 167.2 141 71.6
CANSAT11G0726 Cannabis sativa HOM05D006595 ORTHO05D008238 8.8e-40 167.2 133 75.2
Nitab4.5_0001620g0030 Nicotiana tabacum HOM05D006595 ORTHO05D008238 8.8e-40 167.2 133 66.2
THA.LOC104815114 Tarenaya hassleriana HOM05D006595 ORTHO05D008238 1.5e-39 166.4 129 79.8
Oeu038858.2 Olea europaea HOM05D006595 ORTHO05D008238 4.4e-39 164.9 131 81.7
CDE04G0274 Ceratophyllum demersum HOM05D006595 ORTHO05D008238 3.7e-38 161.8 126 81.0
Migut.F01376 Erythranthe guttata HOM05D006595 ORTHO05D008238 2.4e-37 159.1 125 80.8
Aa31sc409G10 Aethionema arabicum HOM05D006595 ORTHO05D008238 1.6e-36 156.4 131 75.6
PSO339G5391 Papaver somniferum HOM05D006595 ORTHO05D008238 2.0e-36 156.0 133 70.7
PSO384G3168 Papaver somniferum HOM05D006595 ORTHO05D008238 2.0e-36 156.0 133 71.4
Ah.04g161600 Amaranthus hybridus HOM05D000750 ORTHO05D000714 2.6e-36 155.6 120 80.8
Sc16g0012000 Simmondsia chinensis HOM05D006595 ORTHO05D008238 1.7e-35 152.9 128 78.1
Glyma.10G293900 Glycine max HOM05D006595 ORTHO05D008238 2.2e-35 152.5 131 74.8
Medtr1g116170 Medicago truncatula HOM05D006595 ORTHO05D008238 2.9e-35 152.1 124 79.8
BcaC02g07751 Brassica carinata HOM05D006595 ORTHO05D008238 3.8e-35 151.8 130 73.8
BolC4t27880H Brassica oleracea HOM05D006595 ORTHO05D008238 3.8e-35 151.8 130 73.8
Os08g0463900 Oryza sativa ssp. japonica HOM05D006595 ORTHO05D008238 3.8e-35 151.8 125 75.2
Psat6g238960 Pisum sativum HOM05D006595 ORTHO05D008238 5.0e-35 151.4 132 75.8
AT2G34860 Arabidopsis thaliana HOM05D006595 ORTHO05D008238 6.5e-35 151.0 133 72.9
Carub.0004s1654 Capsella rubella HOM05D006595 ORTHO05D008238 6.5e-35 151.0 133 72.9
arahy.Tifrunner.gnm1.ann1.ZL64GD Arachis hypogaea HOM05D006595 ORTHO05D008238 8.5e-35 150.6 129 76.0
CARHR129020 Cardamine hirsuta HOM05D006595 ORTHO05D008238 1.1e-34 150.2 124 76.6
A04p26620 Brassica napus HOM05D006595 ORTHO05D008238 1.9e-34 149.4 126 75.4
C04p64040 Brassica napus HOM05D006595 ORTHO05D008238 1.9e-34 149.4 126 75.4
BraA04t18167Z Brassica rapa HOM05D006595 ORTHO05D008238 1.9e-34 149.4 126 75.4
BcaB06g28828 Brassica carinata HOM05D006595 ORTHO05D008238 2.5e-34 149.1 133 74.4
Lalb_Chr02g0143771 Lupinus albus HOM05D006595 ORTHO05D008238 4.2e-34 148.3 132 72.7
BcaC02g11570 Brassica carinata HOM05D006595 ORTHO05D008238 5.5e-34 147.9 126 75.4
A05p10810 Brassica napus HOM05D006595 ORTHO05D008238 5.5e-34 147.9 126 75.4
C04p13910 Brassica napus HOM05D006595 ORTHO05D008238 5.5e-34 147.9 126 75.4
BolC4t22980H Brassica oleracea HOM05D006595 ORTHO05D008238 5.5e-34 147.9 126 75.4
BraA05t20025Z Brassica rapa HOM05D006595 ORTHO05D008238 5.5e-34 147.9 126 75.4
Thhalv10017283m.g Eutrema salsugineum HOM05D006595 ORTHO05D008238 5.5e-34 147.9 124 78.2
Sp4g17140 Schrenkiella parvula HOM05D006595 ORTHO05D008238 5.5e-34 147.9 132 72.7
Ca_11377_v3 Cicer arietinum L. HOM05D001261 ORTHO05D001130 9.4e-34 147.1 124 77.4
Hund06674 Selenicereus undatus HOM05D006595 ORTHO05D008238 1.2e-33 146.7 126 76.2
TPR.G10430 Trifolium pratense HOM05D006595 ORTHO05D008238 1.2e-33 146.7 128 77.3
HPP92_016182 Vanilla planifolia HOM05D006595 ORTHO05D008238 2.1e-33 146.0 126 77.0
COL.COLO4_10447 Corchorus olitorius HOM05D006595 ORTHO05D008238 1.0e-32 143.7 164 49.4
HPP92_026734 Vanilla planifolia HOM05D006595 ORTHO05D008238 5.2e-32 141.4 126 75.4
Thecc.09G215500 Theobroma cacao HOM05D006595 ORTHO05D008238 9.7e-31 137.1 82 73.2
Glyma.20G243800 Glycine max HOM05D006595 ORTHO05D008238 1.3e-30 136.7 100 83.0
ATR1149G131 Amborella trichopoda HOM05D006595 ORTHO05D008238 6.3e-30 134.4 89 92.1
arahy.Tifrunner.gnm1.ann1.SSSL8J Arachis hypogaea HOM05D006595 ORTHO05D008238 1.8e-29 132.9 121 73.6
unitig_747.g21415 Utricularia gibba HOM05D006595 ORTHO05D008238 7.0e-29 131.0 125 72.8
vmacro04249 Vaccinium macrocarpon HOM05D006595 ORTHO05D008238 1.6e-28 129.8 244 37.7
SEGI_11759 Sequoiadendron giganteum HOM05D006595 ORTHO05D008238 2.0e-28 129.4 131 66.4
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 7.7e-28 127.5 124 68.5
Lsat_1_v5_gn_1_68280 Lactuca sativa HOM05D006595 ORTHO05D008238 2.9e-27 125.6 116 62.1
HanXRQChr11g0344931 Helianthus annuus HOM05D006595 ORTHO05D008238 8.5e-27 124.0 77 75.3
Mapoly0120s0023 Marchantia polymorpha HOM05D006595 ORTHO05D008238 5.5e-26 121.3 125 66.4
QL01p010258 Quercus lobata HOM05D006595 ORTHO05D008238 2.1e-25 119.4 76 71.1
QL08p062509 Quercus lobata HOM05D006595 ORTHO05D008238 2.1e-25 119.4 76 71.1
VMungo0720G3035 Vigna mungo HOM05D006595 ORTHO05D008238 6.8e-24 114.4 84 66.7
SMO331G0037 Selaginella moellendorffii HOM05D006595 ORTHO05D008238 2.0e-23 112.8 85 84.7
Pp3c3_12490 Physcomitrium patens HOM05D006595 ORTHO05D008238 2.6e-23 112.5 128 61.7
MD11G1014500 Malus domestica HOM05D006595 ORTHO05D008238 5.7e-23 111.3 76 71.1
AL4G30870 Arabidopsis lyrata HOM05D006595 ORTHO05D008238 1.7e-22 109.8 138 47.1
FAN11G2269 Fragaria x ananassa HOM05D000750 ORTHO05D000714 1.1e-21 107.1 76 68.4
CBR_g22940 Chara braunii HOM05D006595 ORTHO05D008238 3.1e-21 105.5 123 59.3
FAN16G0514 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.1e-21 105.5 74 67.6
FvH4_3g44571 Fragaria vesca HOM05D006595 ORTHO05D008238 2.0e-20 102.8 74 66.2
PRCOL_00006415 Prasinoderma coloniale HOM05D006595 ORTHO05D008238 9.5e-18 94.0 113 59.3
BcaC07g42181 Brassica carinata HOM05D006595 ORTHO05D008238 8.0e-17 90.9 111 48.6
MCO03G122 Micromonas commoda HOM05D006595 ORTHO05D008238 1.5e-15 86.7 113 58.4
BcaB01g02723 Brassica carinata HOM05D006595 ORTHO05D008238 2.6e-15 85.9 106 49.1
Cre11.g475850 Chlamydomonas reinhardtii HOM05D006595 ORTHO05D008238 9.8e-15 84.0 128 44.5
Thhalv10012349m.g Eutrema salsugineum HOM05D006595 ORTHO05D008238 9.2e-13 77.4 61 65.6
BcaB06g29011 Brassica carinata HOM05D006595 ORTHO05D008238 7.8e-12 74.3 93 50.5
BcaB01g03109 Brassica carinata HOM05D006595 ORTHO05D008238 1.7e-11 73.2 79 51.9
Pp3c4_29200 Physcomitrium patens HOM05D006595 ORTHO05D008238 9.8e-07 57.4 51 51.0
FAN21G2764 Fragaria x ananassa HOM05D006595 ORTHO05D008238 2.2e-06 56.2 30 83.3


User provided reference genes

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