Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 6.6e-88 327.4 172 100.0
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 1.2e-70 270.0 171 80.1
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.2e-68 263.5 175 78.9
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 7.1e-66 254.2 171 80.7
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 4.6e-65 251.5 165 78.2
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 1.9e-63 246.1 170 72.4
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 7.3e-63 244.2 170 71.2
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.6e-62 243.0 171 74.9
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 8.1e-62 240.7 176 69.9
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 1.4e-61 240.0 168 76.8
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 1.8e-61 239.6 168 69.6
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 5.2e-61 238.0 170 71.8
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 2.6e-60 235.7 165 70.9
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 4.4e-60 235.0 171 69.6
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 9.9e-60 233.8 172 66.9
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 8.4e-59 230.7 172 69.2
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 8.4e-59 230.7 166 69.9
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 1.4e-58 229.9 165 69.7
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 2.4e-58 229.2 166 69.9
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 3.2e-58 228.8 166 68.7
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 1.6e-57 226.5 172 68.6
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 3.5e-57 225.3 169 67.5
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 4.6e-57 224.9 172 66.3
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 1.0e-56 223.8 172 63.4
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 2.3e-56 222.6 204 59.8
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 3.9e-56 221.9 175 62.9
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 8.7e-56 220.7 172 64.5
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 1.5e-55 219.9 170 67.1
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 2.5e-55 219.2 172 65.1
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 3.3e-55 218.8 166 66.3
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 6.2e-54 214.5 172 61.6
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.4e-53 213.4 170 62.4
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 1.4e-53 213.4 173 64.7
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 5.3e-53 211.5 165 64.2
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 5.3e-53 211.5 173 63.6
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 2.6e-52 209.1 173 68.2
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 2.6e-52 209.1 176 66.5
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 3.4e-52 208.8 164 62.8
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 5.8e-52 208.0 171 61.4
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 5.8e-52 208.0 175 67.4
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 1.7e-51 206.5 171 60.8
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 2.2e-51 206.1 156 68.6
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 4.9e-51 204.9 174 65.5
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 7.1e-50 201.1 163 62.0
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 1.6e-49 199.9 166 62.7
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 2.7e-49 199.1 169 59.8
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 3.5e-49 198.7 167 63.5
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 6.0e-49 198.0 167 63.5
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 2.3e-48 196.1 166 58.4
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 2.3e-48 196.1 163 60.7
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 3.0e-48 195.7 175 59.4
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 7.6e-44 181.0 200 51.0
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 2.2e-43 179.5 166 59.6
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 2.9e-43 179.1 170 52.9
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 3.8e-43 178.7 116 81.0
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 4.9e-43 178.3 171 55.0
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 4.9e-43 178.3 165 52.7
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 1.1e-42 177.2 162 56.8
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 3.2e-42 175.6 139 63.3
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 4.2e-42 175.3 163 57.1
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 1.2e-41 173.7 166 55.4
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 1.6e-41 173.3 154 59.1
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 7.9e-41 171.0 166 54.2
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 2.3e-40 169.5 164 54.3
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 2.3e-40 169.5 164 54.3
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 6.7e-40 167.9 164 54.3
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 1.5e-39 166.8 157 54.8
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 2.5e-39 166.0 164 53.7
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 2.5e-39 166.0 164 53.7
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 2.5e-39 166.0 157 53.5
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 2.5e-39 166.0 168 57.1
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 1.3e-38 163.7 169 50.3
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 1.3e-38 163.7 157 51.6
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 1.6e-38 163.3 155 54.2
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 1.6e-38 163.3 165 52.1
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 2.8e-38 162.5 162 50.6
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 2.8e-38 162.5 162 52.5
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 4.8e-38 161.8 157 51.6
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 8.2e-38 161.0 157 52.2
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 2.4e-37 159.5 161 52.8
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 9.0e-37 157.5 165 51.5
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 3.4e-36 155.6 157 51.6
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 3.8e-35 152.1 160 50.6
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 1.2e-33 147.1 164 46.3
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 2.7e-33 146.0 164 44.5
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 6.0e-33 144.8 164 45.1
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 7.9e-33 144.4 110 65.5
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 2.3e-32 142.9 140 52.1
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 6.7e-32 141.4 163 46.6
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.9e-31 139.8 164 43.9
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 2.6e-28 129.4 147 46.3
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 2.6e-28 129.4 157 40.8
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 2.1e-25 119.8 117 56.4
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 5.1e-24 115.2 116 47.4
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 2.8e-22 109.4 90 63.3
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 5.3e-21 105.1 133 39.8
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 2.6e-20 102.8 96 55.2
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 4.5e-20 102.1 92 57.6
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 1.7e-19 100.1 104 47.1
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 9.4e-18 94.4 82 63.4
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 8.2e-14 81.3 49 79.6
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 3.0e-08 62.8 36 80.6
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 9.7e-07 57.8 50 54.0


User provided reference genes

Program Settings