Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 9.3e-84 313.5 163 100.0
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 5.1e-58 228.0 162 75.9
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 2.0e-57 226.1 161 75.8
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 1.5e-54 216.5 162 71.6
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 8.5e-53 210.7 164 68.3
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 3.2e-52 208.8 153 74.5
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 1.6e-51 206.5 151 74.2
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 1.0e-50 203.8 160 66.2
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 6.7e-50 201.1 165 66.7
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 1.5e-49 199.9 162 67.9
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 4.4e-49 198.4 162 67.9
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 7.4e-49 197.6 162 67.3
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 9.7e-49 197.2 138 75.4
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 9.7e-49 197.2 165 68.5
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 3.5e-46 188.7 162 66.0
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 5.9e-46 188.0 162 66.7
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 5.9e-46 188.0 162 66.7
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 1.7e-45 186.4 122 79.5
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 2.9e-45 185.7 165 64.8
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 6.5e-45 184.5 166 64.5
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 6.5e-45 184.5 161 67.1
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 1.5e-44 183.3 165 63.6
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 3.2e-44 182.2 128 76.6
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 3.2e-44 182.2 120 75.8
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 4.2e-44 181.8 167 61.1
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 5.5e-44 181.4 117 77.8
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 5.5e-44 181.4 117 77.8
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 5.5e-44 181.4 120 75.0
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 5.5e-44 181.4 164 65.2
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 9.4e-44 180.6 162 64.8
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 1.6e-43 179.9 146 63.7
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 1.6e-43 179.9 163 62.0
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 2.7e-43 179.1 161 63.4
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 3.6e-43 178.7 129 76.0
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 3.6e-43 178.7 148 64.9
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 3.6e-43 178.7 117 76.1
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 3.6e-43 178.7 124 75.0
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 4.7e-43 178.3 117 76.9
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 6.1e-43 177.9 172 61.0
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 6.1e-43 177.9 120 70.8
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 8.0e-43 177.6 115 79.1
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 1.0e-42 177.2 166 59.6
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 1.8e-42 176.4 152 61.8
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 4.0e-42 175.3 120 70.0
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 5.2e-42 174.9 156 62.8
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 5.2e-42 174.9 123 75.6
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 1.2e-41 173.7 117 74.4
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 2.0e-41 172.9 166 60.8
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 2.6e-41 172.6 171 60.2
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 2.6e-41 172.6 171 60.2
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 2.6e-41 172.6 131 71.8
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 3.4e-41 172.2 168 59.5
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 3.4e-41 172.2 145 64.8
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 7.5e-41 171.0 167 61.1
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 2.2e-40 169.5 171 59.6
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 2.2e-40 169.5 171 59.6
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 2.2e-40 169.5 171 59.6
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 2.8e-40 169.1 120 70.8
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 8.3e-40 167.5 160 59.4
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 8.3e-40 167.5 102 78.4
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 1.8e-39 166.4 164 60.4
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 4.5e-38 161.8 113 71.7
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 5.9e-38 161.4 165 57.6
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 1.0e-37 160.6 115 73.9
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 1.3e-37 160.2 160 58.1
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 3.8e-37 158.7 180 53.3
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 3.8e-37 158.7 116 71.6
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 5.0e-37 158.3 113 71.7
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 8.5e-37 157.5 125 67.2
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 8.5e-37 157.5 125 67.2
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 1.5e-36 156.8 164 57.3
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 1.5e-36 156.8 117 75.2
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 4.2e-36 155.2 115 69.6
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 5.5e-36 154.8 160 53.1
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 2.1e-35 152.9 117 66.7
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 2.3e-34 149.4 137 63.5
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 2.0e-33 146.4 94 73.4
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 2.6e-33 146.0 115 65.2
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 5.7e-33 144.8 163 54.6
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 1.7e-32 143.3 136 57.4
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 7.0e-31 137.9 171 52.0
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 2.0e-30 136.3 163 47.9
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 5.9e-30 134.8 123 59.3
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 2.9e-29 132.5 135 57.0
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 2.9e-29 132.5 91 73.6
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 3.8e-29 132.1 160 48.1
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 7.2e-28 127.9 91 73.6
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 3.6e-27 125.6 95 73.7
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 1.4e-26 123.6 127 54.3
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 6.3e-24 114.8 92 68.5
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 5.4e-23 111.7 140 42.1
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 2.7e-22 109.4 119 48.7
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 2.7e-22 109.4 88 64.8
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 7.8e-22 107.8 71 63.4
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 1.3e-21 107.1 180 44.4
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 5.6e-20 101.7 114 46.5
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 1.8e-18 96.7 115 45.2
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 8.9e-18 94.4 55 78.2
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 9.2e-15 84.3 122 43.4
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 2.0e-14 83.2 122 42.6
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 6.0e-14 81.6 154 39.0
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 6.0e-14 81.6 123 42.3
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 8.6e-13 77.8 70 60.0
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 3.6e-11 72.4 108 46.3
Actinidia24129 Actinidia chinensis HOM05D000070 ORTHO05D001255 6.2e-11 71.6 97 55.7
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 1.9e-07 60.1 116 38.8


User provided reference genes

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