Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34660 Davidia involucrata HOM05D001861 ORTHO05D001868 3.2e-81 305.1 159 100.0
Dinv16385 Davidia involucrata HOM05D001861 ORTHO05D001868 3.9e-18 95.5 133 55.6
Actinidia37543 Actinidia chinensis HOM05D001861 ORTHO05D001868 1.7e-13 80.1 136 47.8
CSS0024374 Camellia sinensis var. sinensis HOM05D001861 ORTHO05D001868 4.9e-13 78.6 98 60.2
CSS0030260 Camellia sinensis var. sinensis HOM05D001861 ORTHO05D001868 6.4e-13 78.2 98 60.2
Lj2A1144T90 Lonicera japonica HOM05D001861 ORTHO05D001868 2.7e-11 72.8 137 40.1
CSS0015268 Camellia sinensis var. sinensis HOM05D001861 ORTHO05D001868 4.6e-11 72.0 135 45.2
MSTRG.21470 Avicennia marina HOM05D001861 ORTHO05D001868 1.0e-10 70.9 132 47.0
Actinidia30135 Actinidia chinensis HOM05D001861 ORTHO05D001868 2.3e-10 69.7 84 56.0
Lj1C72T4 Lonicera japonica HOM05D001861 ORTHO05D001868 8.7e-10 67.8 89 56.2
Nitab4.5_0002389g0030 Nicotiana tabacum HOM05D001861 ORTHO05D001868 1.9e-09 66.6 108 49.1
Nitab4.5_0003295g0140 Nicotiana tabacum HOM05D001861 ORTHO05D001868 3.3e-09 65.9 108 52.8
Peaxi162Scf00415g00518 Petunia axillaris HOM05D001861 ORTHO05D001868 3.3e-09 65.9 104 50.0
Migut.D00464 Erythranthe guttata HOM05D001861 ORTHO05D001868 5.6e-09 65.1 129 41.1
vmacro02703 Vaccinium macrocarpon HOM05D001861 ORTHO05D001868 5.6e-09 65.1 87 50.6
Cc01_g17950 Coffea canephora HOM05D001861 ORTHO05D001868 7.3e-09 64.7 104 50.0
Psat6g061640 Pisum sativum HOM05D001861 ORTHO05D001868 7.3e-09 64.7 119 39.5
CAN.G1380.1 Capsicum annuum HOM05D001861 ORTHO05D001868 2.1e-08 63.2 127 37.0
DCAR_018512 Daucus carota HOM05D001861 ORTHO05D001868 4.8e-08 62.0 89 52.8
QL09p040988 Quercus lobata HOM05D001861 ORTHO05D001868 4.8e-08 62.0 113 39.8
SalBow4G2393 Salvia bowleyana HOM05D001861 ORTHO05D001868 1.1e-07 60.8 139 38.8
TPR.G5651 Trifolium pratense HOM05D001861 ORTHO05D001868 1.1e-07 60.8 131 36.6
TAR365G0301 Trochodendron aralioides HOM05D001861 ORTHO05D001868 1.1e-07 60.8 70 50.0
Manes.13G037900 Manihot esculenta HOM05D001861 ORTHO05D001868 1.4e-07 60.5 143 35.7
ECA247G2121 Erigeron canadensis HOM05D001861 ORTHO05D001868 2.4e-07 59.7 91 45.1
Oeu035746.1 Olea europaea HOM05D001861 ORTHO05D001868 3.1e-07 59.3 135 32.6
Ciclev10020148m.g Citrus clementina HOM05D001861 ORTHO05D001868 6.9e-07 58.2 100 44.0
Haze_24681 Corylus avellana HOM05D001861 ORTHO05D001868 1.5e-06 57.0 59 55.9
GSVIVG01028395001 Vitis vinifera HOM05D001861 ORTHO05D001868 2.0e-06 56.6 54 57.4
Ca_09656_v3 Cicer arietinum L. HOM05D001861 ORTHO05D001868 2.6e-06 56.2 60 56.7
Nn3g19746 Nelumbo nucifera HOM05D001861 ORTHO05D001868 3.4e-06 55.8 76 42.1
CiPaw.04G189000 Carya illinoinensis HOM05D001861 ORTHO05D001868 4.5e-06 55.5 53 56.6
Hund18272 Selenicereus undatus HOM05D001861 ORTHO05D001868 4.5e-06 55.5 105 40.0
TAR362G1165 Trochodendron aralioides HOM05D001861 ORTHO05D001868 4.5e-06 55.5 103 34.0
Solyc09g072800.3 Solanum lycopersicum HOM05D001861 ORTHO05D001868 7.6e-06 54.7 68 50.0
Sopen09g028590 Solanum pennellii HOM05D001861 ORTHO05D001868 7.6e-06 54.7 68 50.0
Nn1g02913 Nelumbo nucifera HOM05D001861 ORTHO05D001868 9.9e-06 54.3 45 62.2


User provided reference genes

Program Settings