Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34621 Davidia involucrata HOM05D005758 ORTHO05D029051 6.3e-63 243.8 114 100.0
MSTRG.21495 Avicennia marina HOM05D005758 ORTHO05D007218 3.4e-24 115.2 90 65.6
Potri.005G224000 Populus trichocarpa HOM05D005758 ORTHO05D007218 1.9e-22 109.4 89 61.8
SGA_v2.0_scaffold1G00616 Striga asiatica HOM05D005758 ORTHO05D007218 2.4e-22 109.0 89 59.6
CSS0001414 Camellia sinensis var. sinensis HOM05D005758 ORTHO05D007218 5.4e-22 107.8 103 56.3
Sabra05G0172800 Salix brachista HOM05D005758 ORTHO05D007218 7.1e-22 107.5 89 59.6
RcHm_v2.0_Chr6g0288161 Rosa chinensis HOM05D005758 ORTHO05D007218 2.1e-21 105.9 90 61.1
FAN24G1897 Fragaria x ananassa HOM05D005758 ORTHO05D007218 4.6e-21 104.8 90 60.0
Manes.12G032100 Manihot esculenta HOM05D005758 ORTHO05D007218 4.6e-21 104.8 89 57.3
Rhsim13G0034500 Rhododendron simsii HOM05D005758 ORTHO05D007218 6.0e-21 104.4 93 59.1
Thecc.01G258700 Theobroma cacao HOM05D005758 ORTHO05D007218 1.0e-20 103.6 100 52.0
Duzib133G0949 Durio zibethinus HOM05D005758 ORTHO05D007218 1.3e-20 103.2 100 51.0
DCAR_012547 Daucus carota HOM05D005758 ORTHO05D007218 3.0e-20 102.1 81 63.0
Peaxi162Scf00854g00219 Petunia axillaris HOM05D005758 ORTHO05D007218 3.0e-20 102.1 89 58.4
PSO017G5675 Papaver somniferum HOM05D005758 ORTHO05D007218 5.1e-20 101.3 91 57.1
PSO063G6478 Papaver somniferum HOM05D005758 ORTHO05D007218 5.1e-20 101.3 91 57.1
TAR636G1025 Trochodendron aralioides HOM05D005758 ORTHO05D007218 5.1e-20 101.3 89 56.2
Prupe.8G224000 Prunus persica HOM05D005758 ORTHO05D007218 8.7e-20 100.5 89 56.2
CiPaw.13G172300 Carya illinoinensis HOM05D005758 ORTHO05D007218 1.1e-19 100.1 89 55.1
Gohir.A07G213000 Gossypium hirsutum HOM05D005758 ORTHO05D007218 1.5e-19 99.8 92 55.4
MD10G1184300 Malus domestica HOM05D005758 ORTHO05D007218 1.9e-19 99.4 90 56.7
Solyc05g026140.4 Solanum lycopersicum HOM05D005758 ORTHO05D007218 1.9e-19 99.4 89 53.9
Sopen05g022350 Solanum pennellii HOM05D005758 ORTHO05D007218 1.9e-19 99.4 89 53.9
CANSAT35G0929 Cannabis sativa HOM05D005758 ORTHO05D007218 3.3e-19 98.6 79 64.6
arahy.Tifrunner.gnm1.ann1.N9I7Q3 Arachis hypogaea HOM05D005758 ORTHO05D007218 4.3e-19 98.2 89 55.1
Gorai.001G253600 Gossypium raimondii HOM05D005758 ORTHO05D007218 4.3e-19 98.2 92 55.4
Gohir.D07G219100 Gossypium hirsutum HOM05D005758 ORTHO05D007218 5.6e-19 97.8 94 55.3
Lalb_Chr02g0152411 Lupinus albus HOM05D005758 ORTHO05D007218 5.6e-19 97.8 90 57.8
Cc04_g14920 Coffea canephora HOM05D005758 ORTHO05D007218 7.3e-19 97.4 79 60.8
FvH4_2g21510 Fragaria vesca HOM05D005758 ORTHO05D007218 7.3e-19 97.4 93 55.9
FAN15G0777 Fragaria x ananassa HOM05D005758 ORTHO05D007218 7.3e-19 97.4 93 55.9
THA.LOC104800871 Tarenaya hassleriana HOM05D005758 ORTHO05D007218 7.3e-19 97.4 105 50.5
Eucgr.B01556 Eucalyptus grandis HOM05D005758 ORTHO05D007218 9.6e-19 97.1 107 50.5
FAN27G1683 Fragaria x ananassa HOM05D005758 ORTHO05D007218 1.6e-18 96.3 93 55.9
Nn3g19650 Nelumbo nucifera HOM05D005758 ORTHO05D007218 1.6e-18 96.3 89 56.2
Nitab4.5_0000206g0090 Nicotiana tabacum HOM05D005758 ORTHO05D007218 3.6e-18 95.1 81 56.8
Atru.chr5.1673 Acer truncatum HOM05D005758 ORTHO05D007218 6.2e-18 94.4 89 57.3
Sp4g13680 Schrenkiella parvula HOM05D005758 ORTHO05D007218 6.2e-18 94.4 91 52.7
GSVIVG01028326001 Vitis vinifera HOM05D005758 ORTHO05D007218 1.4e-17 93.2 83 56.6
Cfa002421 Carpinus fangiana HOM05D005758 ORTHO05D007218 1.8e-17 92.8 81 56.8
vmacro02660 Vaccinium macrocarpon HOM05D005758 ORTHO05D007218 1.8e-17 92.8 91 57.1
QL09p049090 Quercus lobata HOM05D005758 ORTHO05D007218 2.4e-17 92.4 86 53.5
Sc24g0003140 Simmondsia chinensis HOM05D005758 ORTHO05D029051 2.4e-17 92.4 89 53.9
Thhalv10016683m.g Eutrema salsugineum HOM05D005758 ORTHO05D007218 3.1e-17 92.0 100 49.0
HanXRQChr09g0254391 Helianthus annuus HOM05D005758 ORTHO05D007218 3.1e-17 92.0 91 53.8
AL4G26390 Arabidopsis lyrata HOM05D005758 ORTHO05D007218 4.0e-17 91.7 91 51.6
arahy.Tifrunner.gnm1.ann1.6W8MXB Arachis hypogaea HOM05D005758 ORTHO05D007218 4.0e-17 91.7 83 54.2
Duzib138G0621 Durio zibethinus HOM05D005758 ORTHO05D007218 4.0e-17 91.7 100 48.0
Aa31LG5G5730 Aethionema arabicum HOM05D005758 ORTHO05D007218 5.3e-17 91.3 91 51.6
COL.COLO4_05896 Corchorus olitorius HOM05D005758 ORTHO05D007218 5.3e-17 91.3 83 51.8
CsaV3_7G027330 Cucumis sativus L. HOM05D005758 ORTHO05D007218 5.3e-17 91.3 89 55.1
Ciclev10023734m.g Citrus clementina HOM05D005758 ORTHO05D007218 1.2e-16 90.1 83 54.2
MELO3C015730.2 Cucumis melo HOM05D005758 ORTHO05D007218 1.2e-16 90.1 89 55.1
AT2G31190 Arabidopsis thaliana HOM05D005758 ORTHO05D007218 2.0e-16 89.4 71 59.2
BcaB06g28512 Brassica carinata HOM05D005758 ORTHO05D007218 2.0e-16 89.4 92 51.1
CAN.G184.8 Capsicum annuum HOM05D005758 ORTHO05D007218 2.0e-16 89.4 84 51.2
VMungo0720G1063 Vigna mungo HOM05D005758 ORTHO05D007218 2.0e-16 89.4 92 54.3
BcaB06g28429 Brassica carinata HOM05D005758 ORTHO05D007218 2.6e-16 89.0 95 50.5
Glyma.13G123400 Glycine max HOM05D005758 ORTHO05D007218 2.6e-16 89.0 67 62.7
Sed0010920 Sechium edule HOM05D005758 ORTHO05D007218 2.6e-16 89.0 89 53.9
A04p24020 Brassica napus HOM05D005758 ORTHO05D007218 3.4e-16 88.6 84 52.4
BraA04t17923Z Brassica rapa HOM05D005758 ORTHO05D007218 4.5e-16 88.2 84 52.4
BolC4t27558H Brassica oleracea HOM05D005758 ORTHO05D007218 5.8e-16 87.8 84 52.4
Cpa.g.sc50.22 Carica papaya HOM05D005758 ORTHO05D007218 5.8e-16 87.8 67 62.7
Glyma.03G163000 Glycine max HOM05D005758 ORTHO05D007218 5.8e-16 87.8 69 62.3
PGR004G1596 Punica granatum HOM05D005758 ORTHO05D007218 5.8e-16 87.8 90 50.0
Phvul.007G193000 Phaseolus vulgaris HOM05D005758 ORTHO05D007218 7.6e-16 87.4 89 53.9
C04p60690 Brassica napus HOM05D005758 ORTHO05D007218 9.9e-16 87.0 84 52.4
TAR365G0290 Trochodendron aralioides HOM05D005758 ORTHO05D007218 9.9e-16 87.0 81 54.3
ClCG09G007800 Citrullus lanatus HOM05D005758 ORTHO05D007218 1.3e-15 86.7 79 57.0
Migut.D00424 Erythranthe guttata HOM05D005758 ORTHO05D007218 1.3e-15 86.7 90 52.2
TWI12G1280 Tripterygium wilfordii HOM05D005758 ORTHO05D007218 1.7e-15 86.3 66 62.1
Lj5g0021558 Lotus japonicus HOM05D005758 ORTHO05D007218 2.2e-15 85.9 89 50.6
QL09p038696 Quercus lobata HOM05D005758 ORTHO05D007218 2.2e-15 85.9 79 51.9
Carub.0004s1247 Capsella rubella HOM05D005758 ORTHO05D007218 2.9e-15 85.5 80 52.5
Aqoxy2G03640 Aquilegia oxysepala HOM05D005758 ORTHO05D007218 4.9e-15 84.7 81 55.6
Haze_24627 Corylus avellana HOM05D005758 ORTHO05D007218 4.9e-15 84.7 67 58.2
Medtr7g096920 Medicago truncatula HOM05D005758 ORTHO05D007218 6.4e-15 84.3 69 58.0
SHI09784 Sapria himalayana HOM05D000105 ORTHO05D007218 6.4e-15 84.3 71 54.9
MD05G1197700 Malus domestica HOM05D005758 ORTHO05D007218 1.1e-14 83.6 90 52.2
CDE03G0270 Ceratophyllum demersum HOM05D005758 ORTHO05D007218 1.9e-14 82.8 88 53.4
Hund09599 Selenicereus undatus HOM05D005758 ORTHO05D007218 1.9e-14 82.8 81 55.6
TPR.G28632 Trifolium pratense HOM05D005758 ORTHO05D007218 1.9e-14 82.8 67 59.7
Glyma.19G164500 Glycine max HOM05D005758 ORTHO05D007218 2.4e-14 82.4 69 58.0
Lj1g0005369 Lotus japonicus HOM05D005758 ORTHO05D007218 3.2e-14 82.0 69 56.5
Psat3g057680 Pisum sativum HOM05D005758 ORTHO05D007218 3.2e-14 82.0 67 58.2
AUR62011874 Chenopodium quinoa HOM05D005758 ORTHO05D007218 4.2e-14 81.6 92 48.9
Ca_08672_v3 Cicer arietinum L. HOM05D005758 ORTHO05D007218 4.2e-14 81.6 67 58.2
MBI07_g30496_MAGBIO Magnolia biondii HOM05D005758 ORTHO05D007218 5.4e-14 81.3 69 56.5
Lsat_1_v5_gn_8_93000 Lactuca sativa HOM05D005758 ORTHO05D007218 7.1e-14 80.9 66 57.6
AUR62024718 Chenopodium quinoa HOM05D005758 ORTHO05D007218 9.3e-14 80.5 68 55.9
VMungo1383G3618 Vigna mungo HOM05D005758 ORTHO05D007218 9.3e-14 80.5 64 59.4
EL10Ac5g10402 Beta vulgaris HOM05D005758 ORTHO05D007218 1.6e-13 79.7 92 46.7
Phvul.001G160800 Phaseolus vulgaris HOM05D005758 ORTHO05D007218 1.6e-13 79.7 69 55.1
ECA236G3842 Erigeron canadensis HOM05D005758 ORTHO05D007218 4.6e-13 78.2 66 56.1
Ah.11g049730 Amaranthus hybridus HOM05D005758 ORTHO05D007218 1.0e-12 77.0 83 44.6
HanXRQChr04g0112661 Helianthus annuus HOM05D005758 ORTHO05D007218 1.3e-12 76.6 66 56.1
HPP92_026239 Vanilla planifolia HOM05D005758 ORTHO05D007218 4.3e-11 71.6 65 55.4
Lsat_1_v5_gn_5_183400 Lactuca sativa HOM05D005758 ORTHO05D007218 5.6e-11 71.2 91 47.3
ATR0736G118 Amborella trichopoda HOM05D005758 ORTHO05D007218 7.4e-11 70.9 89 42.7
ECA248G1569 Erigeron canadensis HOM05D005758 ORTHO05D007218 7.4e-11 70.9 93 47.3
Zm00001eb077710 Zea mays HOM05D005758 ORTHO05D007218 4.8e-10 68.2 103 39.8
Os04g0517300 Oryza sativa ssp. japonica HOM05D005758 ORTHO05D007218 6.2e-10 67.8 89 43.8
unitig_8.g3733 Utricularia gibba HOM05D005758 ORTHO05D007218 1.8e-09 66.2 73 52.1
Zm00001eb077720 Zea mays HOM05D005758 ORTHO05D007218 2.4e-09 65.9 103 38.8
Lj1A66G58 Lonicera japonica HOM05D005758 ORTHO05D007218 2.9e-07 58.9 28 92.9
Lsat_1_v5_gn_5_183361 Lactuca sativa HOM05D005758 ORTHO05D007218 2.4e-06 55.8 95 38.9


User provided reference genes

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