Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34203 Davidia involucrata HOM05D002965 ORTHO05D010183 1.9e-37 158.7 79 100.0
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 1.8e-11 72.4 54 72.2
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.8e-11 72.4 54 72.2
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.8e-11 72.4 54 72.2
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.8e-11 72.4 54 72.2
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 1.8e-11 72.4 42 83.3
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 3.0e-11 71.6 40 87.5
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 3.0e-11 71.6 40 87.5
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 3.0e-11 71.6 40 87.5
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 3.0e-11 71.6 40 87.5
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 3.0e-11 71.6 40 87.5
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 3.0e-11 71.6 40 87.5
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 5.1e-11 70.9 54 70.4
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 5.1e-11 70.9 54 70.4
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 5.1e-11 70.9 54 70.4
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 8.7e-11 70.1 40 85.0
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 8.7e-11 70.1 40 85.0
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 8.7e-11 70.1 40 85.0
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 8.7e-11 70.1 40 85.0
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 8.7e-11 70.1 40 85.0
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 8.7e-11 70.1 40 85.0
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 8.7e-11 70.1 40 85.0
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 8.7e-11 70.1 40 85.0
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 8.7e-11 70.1 40 85.0
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 8.7e-11 70.1 40 85.0
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 8.7e-11 70.1 40 85.0
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 1.5e-10 69.3 40 85.0
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 4.3e-10 67.8 54 68.5
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 4.3e-10 67.8 54 68.5
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 4.3e-10 67.8 54 68.5
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 4.3e-10 67.8 54 68.5
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 4.3e-10 67.8 54 68.5
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 5.6e-10 67.4 54 68.5
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 5.6e-10 67.4 40 82.5
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 7.4e-10 67.0 40 82.5
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 7.4e-10 67.0 40 82.5
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 7.4e-10 67.0 40 82.5
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 9.6e-10 66.6 40 82.5
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 9.6e-10 66.6 40 80.0
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 9.6e-10 66.6 54 66.7
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 1.3e-09 66.2 40 82.5
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 1.3e-09 66.2 40 82.5
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 2.1e-09 65.5 54 66.7
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 2.1e-09 65.5 40 82.5
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.1e-09 65.5 39 79.5
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 6.2e-09 63.9 53 62.3
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 6.2e-09 63.9 47 70.2
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 6.2e-09 63.9 53 62.3
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 8.1e-09 63.5 46 71.7
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 1.1e-08 63.2 32 90.6
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 1.1e-08 63.2 39 74.4
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 1.4e-08 62.8 34 85.3
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 1.4e-08 62.8 47 70.2
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 2.4e-08 62.0 40 72.5
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.4e-08 62.0 54 63.0
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 4.0e-08 61.2 40 77.5
BolC7t41501H Brassica oleracea HOM05D002965 ORTHO05D010183 5.3e-08 60.8 36 77.8
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 5.3e-08 60.8 39 71.8
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 5.3e-08 60.8 32 87.5
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 9.0e-08 60.1 40 75.0
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 1.5e-07 59.3 33 84.8
ATMG01120 Arabidopsis thaliana HOM05D002965 ORTHO05D010183 5.8e-07 57.4 32 84.4
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 1.3e-06 56.2 35 71.4
Hma1.2p1_0000F.1_g000060 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.2e-06 55.5 41 63.4
SMO053G0011 Selaginella moellendorffii HOM05D002965 ORTHO05D010183 3.8e-06 54.7 35 74.3
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 6.4e-06 53.9 54 59.3


User provided reference genes

Program Settings