Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34128 Davidia involucrata HOM05D005262 ORTHO05D006590 2.1e-132 475.7 238 100.0
CSS0022308 Camellia sinensis var. sinensis HOM05D005262 ORTHO05D006590 1.9e-93 346.3 189 91.5
QL03p069106 Quercus lobata HOM05D005262 ORTHO05D006590 1.2e-87 327.0 188 86.2
QL93p1999_0168 Quercus lobata HOM05D005262 ORTHO05D006590 1.2e-87 327.0 188 86.2
CiPaw.05G130500 Carya illinoinensis HOM05D005262 ORTHO05D006590 1.3e-86 323.6 186 86.6
GSVIVG01005152001 Vitis vinifera HOM05D005262 ORTHO05D006590 5.0e-86 321.6 188 86.2
GSVIVG01012217001 Vitis vinifera HOM05D005262 ORTHO05D006590 2.5e-85 319.3 189 84.7
ClCG05G024080 Citrullus lanatus HOM05D005262 ORTHO05D006590 3.2e-85 318.9 208 77.9
Hma1.2p1_1954F.1_g308920 Hydrangea macrophylla HOM05D005262 ORTHO05D006590 1.2e-84 317.0 207 79.2
ClCG00G005120 Citrullus lanatus HOM05D005262 ORTHO05D006590 2.7e-84 315.8 193 81.3
Nitab4.5_0001147g0090 Nicotiana tabacum HOM05D005262 ORTHO05D006590 1.0e-83 313.9 189 82.5
Solyc07g017410.3 Solanum lycopersicum HOM05D005262 ORTHO05D006590 1.0e-83 313.9 189 82.5
Sopen07g006120 Solanum pennellii HOM05D005262 ORTHO05D006590 1.0e-83 313.9 189 82.5
PGSC0003DMG400009555 Solanum tuberosum HOM05D005262 ORTHO05D006590 1.0e-83 313.9 189 82.5
Nitab4.5_0005903g0020 Nicotiana tabacum HOM05D005262 ORTHO05D006590 1.8e-83 313.2 189 83.1
CAN.G293.9 Capsicum annuum HOM05D005262 ORTHO05D006590 6.7e-83 311.2 189 81.5
TAR496G0001 Trochodendron aralioides HOM05D005262 ORTHO05D006590 2.6e-82 309.3 184 82.6
TAR629G1254 Trochodendron aralioides HOM05D005262 ORTHO05D006590 2.6e-82 309.3 184 82.6
Oeu054855.1 Olea europaea HOM05D005262 ORTHO05D006590 3.3e-82 308.9 186 82.8
Lj8C474T0 Lonicera japonica HOM05D005262 ORTHO05D006590 5.7e-82 308.1 187 83.4
Sc04g0007950 Simmondsia chinensis HOM05D005262 ORTHO05D006590 9.7e-82 307.4 189 81.0
Cpa.g.sc57.36 Carica papaya HOM05D005262 ORTHO05D006590 1.7e-81 306.6 189 81.0
Lj7A251G27 Lonicera japonica HOM05D005262 ORTHO05D006590 3.7e-81 305.4 190 81.1
TWI23G0893 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 1.8e-80 303.1 189 78.8
Cfa008943 Carpinus fangiana HOM05D005262 ORTHO05D006590 4.1e-80 302.0 189 80.4
MD07G1136300 Malus domestica HOM05D005262 ORTHO05D006590 5.3e-80 301.6 187 81.3
TWI59G0657 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 9.1e-80 300.8 189 79.4
Rhsim09G0138500 Rhododendron simsii HOM05D005262 ORTHO05D006590 2.0e-79 299.7 186 80.6
MELO3C012117.2 Cucumis melo HOM05D005262 ORTHO05D006590 4.5e-79 298.5 189 78.8
Peaxi162Scf00320g00123 Petunia axillaris HOM05D005262 ORTHO05D006590 7.7e-79 297.7 204 75.0
MD01G1063000 Malus domestica HOM05D005262 ORTHO05D006590 1.0e-78 297.4 187 79.7
Sed0024226 Sechium edule HOM05D005262 ORTHO05D006590 1.3e-78 297.0 187 78.6
Thecc.10G075900 Theobroma cacao HOM05D005262 ORTHO05D006590 2.2e-78 296.2 189 80.4
Lj7C254T2 Lonicera japonica HOM05D005262 ORTHO05D006590 5.0e-78 295.0 188 79.8
CsaV3_5G032960 Cucumis sativus L. HOM05D005262 ORTHO05D006590 6.5e-78 294.7 186 78.0
Prupe.2G171300 Prunus persica HOM05D005262 ORTHO05D006590 8.5e-78 294.3 187 80.2
Lj8C444T0 Lonicera japonica HOM05D005262 ORTHO05D006590 2.5e-77 292.7 209 73.7
Atru.chr11.1609 Acer truncatum HOM05D005262 ORTHO05D006590 4.2e-77 292.0 184 78.3
Cc00_g16620 Coffea canephora HOM05D005262 ORTHO05D006590 7.2e-77 291.2 189 74.1
PSO063G7616 Papaver somniferum HOM05D005262 ORTHO05D006590 7.2e-77 291.2 189 75.7
TAR365G0711 Trochodendron aralioides HOM05D005262 ORTHO05D006590 7.2e-77 291.2 189 78.3
Aqoxy1G02417 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 1.2e-76 290.4 193 74.6
Aqoxy2G00811 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 1.2e-76 290.4 189 75.1
DCAR_013139 Daucus carota HOM05D005262 ORTHO05D006590 1.6e-76 290.0 187 77.5
PSO832G0345 Papaver somniferum HOM05D005262 ORTHO05D006590 4.7e-76 288.5 189 74.6
Duzib114G0995 Durio zibethinus HOM05D005262 ORTHO05D006590 2.3e-75 286.2 189 77.2
SGA_v2.0_scaffold25G10746 Striga asiatica HOM05D005262 ORTHO05D006590 2.3e-75 286.2 188 74.5
SGA_v2.0_scaffold90G27753 Striga asiatica HOM05D005262 ORTHO05D006590 5.2e-75 285.0 188 73.9
Migut.O00263 Erythranthe guttata HOM05D005262 ORTHO05D006590 6.8e-75 284.6 182 77.5
HPP92_008614 Vanilla planifolia HOM05D005262 ORTHO05D006590 8.8e-75 284.3 187 74.9
FAN26G2856 Fragaria x ananassa HOM05D005262 ORTHO05D006590 4.4e-74 282.0 188 76.1
FvH4_1g30250 Fragaria vesca HOM05D005262 ORTHO05D006590 5.7e-74 281.6 188 76.1
FAN19G1549 Fragaria x ananassa HOM05D005262 ORTHO05D006590 1.3e-73 280.4 191 75.4
HanXRQChr15g0476911 Helianthus annuus HOM05D005262 ORTHO05D006590 2.8e-73 279.3 187 74.3
MSTRG.11557 Avicennia marina HOM05D005262 ORTHO05D006590 3.7e-73 278.9 188 72.9
PGR102G3250 Punica granatum HOM05D005262 ORTHO05D006590 3.7e-73 278.9 184 75.5
FAN23G1362 Fragaria x ananassa HOM05D005262 ORTHO05D006590 4.8e-73 278.5 188 76.1
Ciclev10032849m.g Citrus clementina HOM05D005262 ORTHO05D006590 8.3e-73 277.7 189 73.0
Os12g0209100 Oryza sativa ssp. japonica HOM05D005262 ORTHO05D006590 8.3e-73 277.7 182 74.2
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 3.1e-72 275.8 187 71.7
QL07p005102 Quercus lobata HOM05D005262 ORTHO05D006590 5.4e-72 275.0 159 85.5
Potri.010G165500 Populus trichocarpa HOM05D005262 ORTHO05D006590 7.0e-72 274.6 184 73.9
Lj6g0009238 Lotus japonicus HOM05D005262 ORTHO05D006590 1.6e-71 273.5 189 71.4
Gohir.D04G003700 Gossypium hirsutum HOM05D005262 ORTHO05D006590 2.7e-71 272.7 189 74.6
Gorai.012G004900 Gossypium raimondii HOM05D005262 ORTHO05D006590 2.7e-71 272.7 189 74.6
Ca_02973_v3 Cicer arietinum L. HOM05D005262 ORTHO05D006590 3.5e-71 272.3 189 73.5
Glyma.01G052200 Glycine max HOM05D005262 ORTHO05D006590 1.0e-70 270.8 187 72.7
Glyma.02G110400 Glycine max HOM05D005262 ORTHO05D006590 1.3e-70 270.4 187 72.2
Psat1g094200 Pisum sativum HOM05D005262 ORTHO05D006590 1.7e-70 270.0 189 73.0
Gohir.A05G412300 Gossypium hirsutum HOM05D005262 ORTHO05D006590 2.3e-70 269.6 189 74.1
HanXRQChr17g0545311 Helianthus annuus HOM05D005262 ORTHO05D006590 2.3e-70 269.6 184 72.8
Nn4g23238 Nelumbo nucifera HOM05D005262 ORTHO05D006590 2.3e-70 269.6 152 86.2
Lj2g0009005 Lotus japonicus HOM05D005262 ORTHO05D006590 2.9e-70 269.2 189 70.9
Lalb_Chr12g0202851 Lupinus albus HOM05D005262 ORTHO05D006590 3.8e-70 268.9 189 69.8
Gohir.A10G054500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 1.9e-69 266.5 189 73.0
CANSAT80G0446 Cannabis sativa HOM05D005262 ORTHO05D006590 2.5e-69 266.2 176 74.4
TPR.G4647 Trifolium pratense HOM05D005262 ORTHO05D006590 2.5e-69 266.2 189 70.4
Manes.01G033800 Manihot esculenta HOM05D005262 ORTHO05D006590 3.3e-69 265.8 190 70.5
Phvul.003G046600 Phaseolus vulgaris HOM05D005262 ORTHO05D006590 4.2e-69 265.4 187 71.7
EL10Ac8g18975 Beta vulgaris HOM05D005262 ORTHO05D006590 1.6e-68 263.5 182 70.3
Lsat_1_v5_gn_3_51960 Lactuca sativa HOM05D005262 ORTHO05D006590 1.6e-68 263.5 182 69.8
ATR0810G029 Amborella trichopoda HOM05D005262 ORTHO05D006590 2.8e-68 262.7 187 70.1
VMungo1215G2947 Vigna mungo HOM05D005262 ORTHO05D006590 2.8e-68 262.7 189 70.9
AUR62032822 Chenopodium quinoa HOM05D005262 ORTHO05D006590 3.6e-68 262.3 182 70.3
unitig_749.g14151 Utricularia gibba HOM05D005262 ORTHO05D006590 3.6e-68 262.3 182 68.7
Sabra10G0125800 Salix brachista HOM05D005262 ORTHO05D006590 4.7e-68 261.9 206 67.0
Zm00001eb163570 Zea mays HOM05D005262 ORTHO05D006590 1.8e-67 260.0 182 69.8
Gorai.011G060300 Gossypium raimondii HOM05D005262 ORTHO05D006590 2.3e-67 259.6 178 73.6
arahy.Tifrunner.gnm1.ann1.XG4VM3 Arachis hypogaea HOM05D005262 ORTHO05D006590 5.7e-66 255.0 235 57.9
COL.COLO4_28415 Corchorus olitorius HOM05D005262 ORTHO05D006590 5.7e-66 255.0 178 71.9
arahy.Tifrunner.gnm1.ann1.EK09V6 Arachis hypogaea HOM05D005262 ORTHO05D006590 8.3e-65 251.1 207 62.8
Medtr8g006800 Medicago truncatula HOM05D005262 ORTHO05D006590 1.8e-64 250.0 178 69.7
Haze_11969 Corylus avellana HOM05D001063 ORTHO05D000986 4.1e-64 248.8 157 79.0
Medtr2g087760 Medicago truncatula HOM05D005262 ORTHO05D006590 7.0e-64 248.1 174 70.7
Hund04408 Selenicereus undatus HOM05D005262 ORTHO05D006590 7.0e-64 248.1 273 52.0
SalBow6G1526 Salvia bowleyana HOM05D005262 ORTHO05D006590 3.5e-63 245.7 186 64.5
CDE02G1435 Ceratophyllum demersum HOM05D005262 ORTHO05D006590 1.7e-62 243.4 188 66.0
Eucgr.I00218 Eucalyptus grandis HOM05D005262 ORTHO05D006590 4.3e-61 238.8 163 73.6
SEGI_18406 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 5.2e-59 231.9 183 63.4
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 7.0e-56 221.5 191 59.2
THA.LOC104818198 Tarenaya hassleriana HOM05D005262 ORTHO05D006590 9.2e-56 221.1 181 58.6
vmacro10351 Vaccinium macrocarpon HOM05D005262 ORTHO05D006590 4.6e-55 218.8 183 66.7
CARHR025210 Cardamine hirsuta HOM05D005262 ORTHO05D006590 1.7e-54 216.9 182 58.8
CAN.G228.3 Capsicum annuum HOM05D005262 ORTHO05D006590 6.6e-54 214.9 207 57.5
Aa31LG7G8380 Aethionema arabicum HOM05D005262 ORTHO05D006590 1.2e-52 210.7 182 57.1
Carub.0001s2427 Capsella rubella HOM05D005262 ORTHO05D006590 1.2e-50 204.1 182 56.0
Thhalv10008835m.g Eutrema salsugineum HOM05D005262 ORTHO05D006590 4.4e-50 202.2 182 55.5
AL1G38960 Arabidopsis lyrata HOM05D005262 ORTHO05D006590 5.8e-50 201.8 182 56.0
Sp1g22060 Schrenkiella parvula HOM05D005262 ORTHO05D006590 2.2e-49 199.9 182 55.5
AT1G26750 Arabidopsis thaliana HOM05D005262 ORTHO05D006590 2.4e-48 196.4 182 55.5
A07p13080 Brassica napus HOM05D005262 ORTHO05D006590 3.5e-47 192.6 182 54.4
RcHm_v2.0_Chr6g0271051 Rosa chinensis HOM05D005262 ORTHO05D006590 1.0e-46 191.0 175 62.3
BraA07t29079Z Brassica rapa HOM05D005262 ORTHO05D006590 2.3e-46 189.9 182 54.4
BcaC06g35126 Brassica carinata HOM05D005262 ORTHO05D006590 5.6e-45 185.3 182 52.7
BcaB03g14087 Brassica carinata HOM05D005262 ORTHO05D006590 1.2e-44 184.1 182 52.2
C07p19560 Brassica napus HOM05D005262 ORTHO05D006590 1.6e-44 183.7 182 52.2
BolC7t42473H Brassica oleracea HOM05D005262 ORTHO05D006590 1.6e-44 183.7 182 52.2
C05p24220 Brassica napus HOM05D005262 ORTHO05D006590 8.9e-43 177.9 182 51.1
Eucgr.L00661 Eucalyptus grandis HOM05D005262 ORTHO05D006590 2.0e-42 176.8 106 84.9
A09p40160 Brassica napus HOM05D005262 ORTHO05D006590 5.8e-42 175.3 182 50.0
BraA09t39514Z Brassica rapa HOM05D005262 ORTHO05D006590 5.8e-42 175.3 182 50.0
BolC5t31158H Brassica oleracea HOM05D005262 ORTHO05D006590 3.0e-38 162.9 148 56.8
Gohir.D10G056500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 2.1e-36 156.8 155 58.7
ClCG08G001930 Citrullus lanatus HOM05D005262 ORTHO05D006590 2.4e-35 153.3 115 71.3
BcaC05g26391 Brassica carinata HOM05D005262 ORTHO05D006590 5.8e-34 148.7 180 47.2
Oeu021067.1 Olea europaea HOM05D005262 ORTHO05D006590 5.1e-30 135.6 78 80.8
RcHm_v2.0_Chr7g0220341 Rosa chinensis HOM05D005262 ORTHO05D006590 4.4e-26 122.5 86 74.4
Haze_01349 Corylus avellana HOM05D005262 ORTHO05D006590 8.4e-25 118.2 86 70.9
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.9e-24 117.1 80 73.8
SEGI_29332 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 7.1e-24 115.2 92 63.0
Glyma.11G251200 Glycine max HOM05D005262 ORTHO05D006590 4.6e-23 112.5 73 71.2
Pp3c14_7320 Physcomitrium patens HOM05D005262 ORTHO05D006590 9.6e-21 104.8 155 39.4
SEGI_36558 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 3.6e-20 102.8 81 63.0
SEGI_23137 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 4.8e-20 102.4 86 61.6
SEGI_39727 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 1.1e-19 101.3 81 61.7
AagrBONN_evm.TU.Sc2ySwM_228.1458 Anthoceros agrestis HOM05D005262 ORTHO05D006590 1.4e-19 100.9 151 39.7
RcHm_v2.0_Chr7g0220351 Rosa chinensis HOM05D005262 ORTHO05D006590 2.4e-19 100.1 61 80.3
CBR_g30169 Chara braunii HOM05D005262 ORTHO05D006590 9.0e-19 98.2 159 33.3
SHI20784 Sapria himalayana HOM05D005262 ORTHO05D006590 4.5e-18 95.9 97 54.6
Mapoly0001s0053 Marchantia polymorpha HOM05D005262 ORTHO05D006590 3.8e-17 92.8 119 40.3
Eucgr.L00657 Eucalyptus grandis HOM05D005262 ORTHO05D006590 2.1e-12 77.0 91 53.8
FAN15G0396 Fragaria x ananassa HOM05D005262 ORTHO05D006590 1.8e-11 73.9 66 62.1
Zm00001eb076020 Zea mays HOM05D005262 ORTHO05D444176 1.0e-06 58.2 45 60.0


User provided reference genes

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