Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 2.4e-159 565.5 285 100.0
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 1.1e-119 433.7 273 79.1
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 6.3e-112 407.9 270 77.0
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 5.9e-110 401.4 273 75.5
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 2.3e-109 399.4 274 75.2
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 1.5e-108 396.7 273 76.6
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 1.5e-108 396.7 273 74.7
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 1.6e-107 393.3 273 73.6
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 8.0e-107 391.0 278 70.9
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 4.0e-106 388.7 274 73.7
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 5.2e-106 388.3 273 74.7
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 1.2e-105 387.1 273 73.3
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 1.5e-105 386.7 278 71.2
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 2.0e-105 386.3 275 73.5
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 4.4e-105 385.2 284 70.4
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 2.9e-104 382.5 281 71.9
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 1.9e-103 379.8 274 72.6
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 2.4e-103 379.4 275 72.7
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 4.1e-103 378.6 273 71.1
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 5.4e-103 378.3 274 71.9
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 7.0e-103 377.9 273 72.2
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 3.5e-102 375.6 273 71.4
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 1.0e-101 374.0 276 69.9
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 3.9e-101 372.1 274 71.2
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 4.3e-100 368.6 273 70.7
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 2.8e-99 365.9 273 67.8
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 4.7e-99 365.2 272 68.4
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 8.0e-99 364.4 274 70.1
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 8.0e-99 364.4 274 70.1
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 1.4e-98 363.6 273 69.6
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 1.8e-98 363.2 273 69.6
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 2.3e-98 362.8 273 69.2
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 8.9e-98 360.9 280 68.6
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 3.4e-97 359.0 270 68.9
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 3.4e-97 359.0 277 70.4
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 7.5e-97 357.8 276 68.8
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 7.5e-97 357.8 274 69.0
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 7.5e-97 357.8 275 69.1
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 9.8e-97 357.5 274 68.2
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 9.8e-97 357.5 273 68.9
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 1.3e-96 357.1 302 62.9
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 1.7e-96 356.7 269 68.4
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 2.2e-96 356.3 273 66.3
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 3.7e-96 355.5 274 70.4
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 4.9e-96 355.1 278 70.5
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 4.9e-96 355.1 274 68.6
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 4.9e-96 355.1 275 69.1
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 4.9e-96 355.1 274 66.1
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 8.3e-96 354.4 273 67.0
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 1.1e-95 354.0 274 66.4
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 5.4e-95 351.7 273 64.8
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 5.4e-95 351.7 274 65.7
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 7.0e-95 351.3 273 68.5
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 9.2e-95 350.9 273 68.5
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 9.2e-95 350.9 274 65.7
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 3.5e-94 349.0 277 66.8
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 1.7e-93 346.7 273 64.5
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 3.9e-93 345.5 271 67.9
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 6.6e-93 344.7 275 66.9
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 1.9e-92 343.2 281 66.9
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 1.9e-92 343.2 275 66.2
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 3.3e-92 342.4 313 61.3
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 2.1e-91 339.7 269 66.9
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 1.1e-90 337.4 269 68.4
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 5.2e-90 335.1 281 65.5
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 1.2e-89 334.0 274 66.1
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 5.8e-89 331.6 275 63.3
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 7.5e-89 331.3 208 80.3
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 9.9e-89 330.9 275 65.1
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 2.2e-88 329.7 278 64.0
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 3.7e-88 328.9 278 64.7
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 4.9e-88 328.6 307 58.3
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 1.1e-87 327.4 274 64.6
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 1.2e-86 323.9 274 63.5
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 1.6e-86 323.6 281 65.1
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 1.6e-86 323.6 274 64.2
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 2.7e-86 322.8 274 64.2
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 2.3e-85 319.7 276 64.5
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 3.9e-85 318.9 276 64.9
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 6.6e-85 318.2 276 64.1
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 1.1e-84 317.4 297 59.9
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 1.5e-84 317.0 277 63.9
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 3.3e-84 315.8 276 64.5
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 5.6e-84 315.1 274 62.0
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 9.5e-84 314.3 279 62.4
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 9.5e-84 314.3 279 62.4
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 6.2e-83 311.6 278 62.6
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 4.0e-82 308.9 306 56.9
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 2.6e-81 306.2 220 75.9
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 4.9e-80 302.0 262 61.8
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 1.1e-79 300.8 275 58.5
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 1.6e-78 297.0 274 59.9
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 1.7e-77 293.5 280 58.2
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 1.8e-74 283.5 212 68.4
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 1.5e-73 280.4 193 80.8
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 2.6e-73 279.6 219 68.0
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 5.8e-73 278.5 234 65.0
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 1.3e-72 277.3 212 67.9
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 4.6e-70 268.9 280 55.0
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 2.6e-65 253.1 223 62.8
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 7.6e-65 251.5 223 62.3
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 3.5e-62 242.7 194 68.0
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 7.9e-62 241.5 190 63.7
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 8.1e-59 231.5 215 58.1
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 3.1e-58 229.6 143 80.4
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 7.1e-55 218.4 191 58.1
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 6.2e-51 205.3 198 54.5
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 1.6e-46 190.7 221 52.0
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 7.9e-46 188.3 216 51.9
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 7.4e-44 181.8 200 49.5
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 1.2e-41 174.5 163 63.8
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 1.3e-40 171.0 161 55.3
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 3.7e-27 126.3 194 39.2
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 3.1e-26 123.2 196 36.7
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 8.2e-19 98.6 173 39.3
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 8.0e-14 82.0 45 82.2
MD13G1066100 Malus domestica HOM05D002318 ORTHO05D008744 1.4e-13 81.3 76 50.0
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 3.4e-12 76.6 112 35.7
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 5.3e-10 69.3 98 43.9
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 9.1e-10 68.6 37 81.1


User provided reference genes

Program Settings