Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34089 Davidia involucrata HOM05D003751 ORTHO05D004765 2.4e-64 250.0 307 100.0
Lsat_1_v5_gn_4_12041 Lactuca sativa HOM05D003751 ORTHO05D004765 4.5e-55 219.2 299 96.3
Cpa.g.sc1.101 Carica papaya HOM05D003751 ORTHO05D004765 1.3e-54 217.6 297 96.0
GSVIVG01012205001 Vitis vinifera HOM05D003751 ORTHO05D004765 1.3e-54 217.6 299 96.7
QL03p071051 Quercus lobata HOM05D003751 ORTHO05D004765 1.7e-54 217.2 297 94.6
Actinidia33247 Actinidia chinensis HOM05D003751 ORTHO05D004765 2.9e-54 216.5 299 96.3
Cfa008900 Carpinus fangiana HOM05D003751 ORTHO05D004765 6.5e-54 215.3 297 96.6
TAR622G0005 Trochodendron aralioides HOM05D003751 ORTHO05D004765 6.5e-54 215.3 299 92.0
Lj6A782T110 Lonicera japonica HOM05D003751 ORTHO05D004765 8.5e-54 214.9 299 96.0
COL.COLO4_36892 Corchorus olitorius HOM05D003751 ORTHO05D004765 1.9e-53 213.8 297 95.3
Lsat_1_v5_gn_8_48161 Lactuca sativa HOM05D003751 ORTHO05D004765 1.9e-53 213.8 299 96.0
RcHm_v2.0_Chr4g0438711 Rosa chinensis HOM05D003751 ORTHO05D004765 1.9e-53 213.8 297 96.0
HanXRQChr12g0379561 Helianthus annuus HOM05D003751 ORTHO05D004765 3.2e-53 213.0 299 95.3
Hma1.2p1_0357F.1_g134490 Hydrangea macrophylla HOM05D003751 ORTHO05D004765 3.2e-53 213.0 299 95.7
CiPaw.05G127300 Carya illinoinensis HOM05D003751 ORTHO05D004765 4.2e-53 212.6 297 96.3
MD13G1065200 Malus domestica HOM05D003751 ORTHO05D004765 4.2e-53 212.6 297 96.0
Prupe.1G283000 Prunus persica HOM05D003751 ORTHO05D004765 4.2e-53 212.6 297 96.0
Solyc01g011040.3 Solanum lycopersicum HOM05D003751 ORTHO05D004765 4.2e-53 212.6 297 96.3
Sopen01g034040 Solanum pennellii HOM05D003751 ORTHO05D004765 4.2e-53 212.6 297 96.3
PGSC0003DMG400004190 Solanum tuberosum HOM05D003751 ORTHO05D004765 4.2e-53 212.6 297 96.3
CAN.G541.15 Capsicum annuum HOM05D003751 ORTHO05D004765 7.2e-53 211.8 297 95.6
FAN22G1318 Fragaria x ananassa HOM05D003751 ORTHO05D004765 7.2e-53 211.8 297 95.6
HanXRQChr08g0211521 Helianthus annuus HOM05D003751 ORTHO05D004765 7.2e-53 211.8 299 95.3
ECA233G2546 Erigeron canadensis HOM05D003751 ORTHO05D004765 9.4e-53 211.5 299 95.7
FAN17G0137 Fragaria x ananassa HOM05D003751 ORTHO05D004765 9.4e-53 211.5 297 95.3
CiPaw.06G090700 Carya illinoinensis HOM05D003751 ORTHO05D004765 1.6e-52 210.7 297 96.0
Actinidia12325 Actinidia chinensis HOM05D003751 ORTHO05D004765 2.1e-52 210.3 299 95.0
Gohir.A07G069400 Gossypium hirsutum HOM05D003751 ORTHO05D004765 2.1e-52 210.3 297 94.6
Nitab4.5_0000720g0010 Nicotiana tabacum HOM05D003751 ORTHO05D004765 2.1e-52 210.3 297 95.3
Nitab4.5_0002832g0050 Nicotiana tabacum HOM05D003751 ORTHO05D004765 2.1e-52 210.3 297 95.3
PSO063G1864 Papaver somniferum HOM05D003751 ORTHO05D004765 2.1e-52 210.3 299 95.3
Hund05853 Selenicereus undatus HOM05D003751 ORTHO05D004765 2.7e-52 209.9 299 93.0
Gorai.001G078000 Gossypium raimondii HOM05D003751 ORTHO05D004765 3.6e-52 209.5 297 94.3
Gorai.008G196500 Gossypium raimondii HOM05D003751 ORTHO05D004765 3.6e-52 209.5 297 95.3
Manes.05G108200 Manihot esculenta HOM05D003751 ORTHO05D004765 3.6e-52 209.5 297 93.6
CANSAT80G0608 Cannabis sativa HOM05D003751 ORTHO05D004765 4.7e-52 209.1 297 95.3
CANSAT80G1362 Cannabis sativa HOM05D003751 ORTHO05D004765 4.7e-52 209.1 297 95.3
Gohir.A12G180500 Gossypium hirsutum HOM05D003751 ORTHO05D004765 4.7e-52 209.1 297 93.3
MD16G1063500 Malus domestica HOM05D003751 ORTHO05D004765 4.7e-52 209.1 297 95.3
Ciclev10021138m.g Citrus clementina HOM05D003751 ORTHO05D004765 6.1e-52 208.8 297 95.3
Rhsim12G0134600 Rhododendron simsii HOM05D003751 ORTHO05D004765 7.9e-52 208.4 306 84.0
Glyma.02G114800 Glycine max HOM05D003751 ORTHO05D004765 1.4e-51 207.6 297 95.6
Gohir.D07G073800 Gossypium hirsutum HOM05D003751 ORTHO05D004765 1.4e-51 207.6 297 93.9
Peaxi162Scf00314g00122 Petunia axillaris HOM05D003751 ORTHO05D004765 1.4e-51 207.6 303 91.7
VMungo1215G2610 Vigna mungo HOM05D003751 ORTHO05D004765 1.4e-51 207.6 297 94.9
Nn4g23361 Nelumbo nucifera HOM05D003751 ORTHO05D004765 1.8e-51 207.2 297 94.6
Thecc.03G096900 Theobroma cacao HOM05D003751 ORTHO05D004765 1.8e-51 207.2 297 95.6
TPR.G24438 Trifolium pratense HOM05D003751 ORTHO05D004765 1.8e-51 207.2 297 94.6
Phvul.002G081300 Phaseolus vulgaris HOM05D003751 ORTHO05D004765 2.3e-51 206.8 297 94.9
Ca_04940_v3 Cicer arietinum L. HOM05D003751 ORTHO05D004765 3.0e-51 206.5 297 94.9
Duzib205G0623 Durio zibethinus HOM05D003751 ORTHO05D004765 5.2e-51 205.7 297 92.3
PGR102G2931 Punica granatum HOM05D003751 ORTHO05D004765 5.2e-51 205.7 299 94.0
arahy.Tifrunner.gnm1.ann1.V223R1 Arachis hypogaea HOM05D003751 ORTHO05D004765 6.7e-51 205.3 297 95.3
arahy.Tifrunner.gnm1.ann1.Y3WTJM Arachis hypogaea HOM05D003751 ORTHO05D004765 6.7e-51 205.3 297 95.3
Potri.010G160700 Populus trichocarpa HOM05D003751 ORTHO05D004765 6.7e-51 205.3 297 92.9
Manes.01G029800 Manihot esculenta HOM05D003751 ORTHO05D004765 8.8e-51 204.9 297 92.6
Lalb_Chr10g0098641 Lupinus albus HOM05D003751 ORTHO05D004765 1.1e-50 204.5 297 94.6
Lalb_Chr17g0341071 Lupinus albus HOM05D003751 ORTHO05D004765 1.1e-50 204.5 297 94.6
Psat2g128600 Pisum sativum HOM05D003751 ORTHO05D004765 1.1e-50 204.5 297 94.6
Glyma.01G056300 Glycine max HOM05D003751 ORTHO05D004765 2.0e-50 203.8 297 94.9
Lj2g0008638 Lotus japonicus HOM05D003751 ORTHO05D004765 2.0e-50 203.8 297 94.6
Hund14089 Selenicereus undatus HOM05D003751 ORTHO05D004765 2.0e-50 203.8 297 90.9
Potri.008G093400 Populus trichocarpa HOM05D003751 ORTHO05D004765 2.6e-50 203.4 297 92.9
Sabra08G0070200 Salix brachista HOM05D003751 ORTHO05D004765 2.6e-50 203.4 297 92.9
Cc11_g12270 Coffea canephora HOM05D003751 ORTHO05D004765 3.3e-50 203.0 298 95.3
Sc11g0002320 Simmondsia chinensis HOM05D003751 ORTHO05D004765 4.4e-50 202.6 297 90.9
THA.LOC104818332 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 4.4e-50 202.6 297 94.3
TWI79G0662 Tripterygium wilfordii HOM05D003751 ORTHO05D004765 7.4e-50 201.8 297 94.6
Ah.03g139090 Amaranthus hybridus HOM05D003751 ORTHO05D004765 9.7e-50 201.4 297 91.9
Eucgr.B03173 Eucalyptus grandis HOM05D003751 ORTHO05D004765 9.7e-50 201.4 299 93.3
Medtr5g043800 Medicago truncatula HOM05D003751 ORTHO05D004765 2.2e-49 200.3 297 93.9
SGA_v2.0_scaffold36G14436 Striga asiatica HOM05D003751 ORTHO05D004765 2.2e-49 200.3 301 94.0
Migut.L01211 Erythranthe guttata HOM05D003751 ORTHO05D004765 2.8e-49 199.9 301 93.7
THA.LOC104801343 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 3.7e-49 199.5 297 92.9
Sed0012304 Sechium edule HOM05D003751 ORTHO05D004765 4.8e-49 199.1 297 91.2
Migut.E00057 Erythranthe guttata HOM05D003751 ORTHO05D004765 6.3e-49 198.7 301 93.4
Peaxi162Scf00097g00610 Petunia axillaris HOM05D003751 ORTHO05D004765 6.3e-49 198.7 317 63.7
Nn3g17386 Nelumbo nucifera HOM05D003751 ORTHO05D004765 1.4e-48 197.6 297 92.6
SGA_v2.0_scaffold16G07765 Striga asiatica HOM05D003751 ORTHO05D004765 1.4e-48 197.6 301 93.4
MSTRG.7761 Avicennia marina HOM05D003751 ORTHO05D004765 1.8e-48 197.2 301 93.4
AUR62007943 Chenopodium quinoa HOM05D003751 ORTHO05D004765 3.1e-48 196.4 297 79.1
CsaV3_5G033180 Cucumis sativus L. HOM05D003751 ORTHO05D004765 5.3e-48 195.7 297 92.6
AL8G37900 Arabidopsis lyrata HOM05D003751 ORTHO05D004765 1.2e-47 194.5 296 93.6
AT5G61240 Arabidopsis thaliana HOM05D003751 ORTHO05D004765 1.2e-47 194.5 296 93.6
Carub.0008s2191 Capsella rubella HOM05D003751 ORTHO05D004765 1.2e-47 194.5 296 93.6
CARHR274990 Cardamine hirsuta HOM05D003751 ORTHO05D004765 1.2e-47 194.5 296 93.6
Haze_11929 Corylus avellana HOM05D003751 ORTHO05D004765 1.2e-47 194.5 339 68.7
Thhalv10004587m.g Eutrema salsugineum HOM05D003751 ORTHO05D004765 1.2e-47 194.5 296 93.6
Sp2g24470 Schrenkiella parvula HOM05D003751 ORTHO05D004765 1.2e-47 194.5 296 93.6
Thecc.02G335000 Theobroma cacao HOM05D003751 ORTHO05D004765 1.2e-47 194.5 297 91.2
CSS0038990 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 2.6e-47 193.4 308 82.5
Sabra10G0122300 Salix brachista HOM05D003751 ORTHO05D004765 2.6e-47 193.4 341 67.2
SEGI_02286 Sequoiadendron giganteum HOM05D003751 ORTHO05D004765 3.5e-47 193.0 301 90.4
BcaC06g33170 Brassica carinata HOM05D003751 ORTHO05D004765 5.9e-47 192.2 296 92.9
BcaC06g33219 Brassica carinata HOM05D003751 ORTHO05D004765 5.9e-47 192.2 296 92.9
A03p46870 Brassica napus HOM05D003751 ORTHO05D004765 5.9e-47 192.2 296 92.9
C07p44920 Brassica napus HOM05D003751 ORTHO05D004765 5.9e-47 192.2 296 92.9
Sed0016795 Sechium edule HOM05D003751 ORTHO05D004765 5.9e-47 192.2 297 92.6
Aa31LG11G2120 Aethionema arabicum HOM05D003751 ORTHO05D004765 1.0e-46 191.4 300 92.7
Duzib251G0914 Durio zibethinus HOM05D003751 ORTHO05D004765 1.0e-46 191.4 297 91.6
Actinidia19010 Actinidia chinensis HOM05D003751 ORTHO05D004765 2.9e-46 189.9 300 91.3
SalBow2G2568 Salvia bowleyana HOM05D003751 ORTHO05D004765 3.8e-46 189.5 299 84.9
CDE07G1785 Ceratophyllum demersum HOM05D003751 ORTHO05D004765 5.0e-46 189.1 299 91.0
SalBow2G2522 Salvia bowleyana HOM05D003751 ORTHO05D004765 5.0e-46 189.1 299 92.6
vmacro01326 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 5.0e-46 189.1 327 66.1
A09p07270 Brassica napus HOM05D003751 ORTHO05D004765 6.5e-46 188.7 297 91.9
BcaC04g23458 Brassica carinata HOM05D003751 ORTHO05D004765 8.5e-46 188.3 297 91.9
TWI75G1095 Tripterygium wilfordii HOM05D003751 ORTHO05D004765 1.5e-45 187.6 220 95.9
C09p08130 Brassica napus HOM05D003751 ORTHO05D004765 3.2e-45 186.4 297 91.6
COL.COLO4_27919 Corchorus olitorius HOM05D003751 ORTHO05D004765 3.2e-45 186.4 296 89.2
Hma1.2p1_0322F.1_g124910 Hydrangea macrophylla HOM05D003751 ORTHO05D004765 7.2e-45 185.3 299 91.3
BraA03t13807Z Brassica rapa HOM05D003751 ORTHO05D004765 1.2e-44 184.5 305 77.7
AUR62003123 Chenopodium quinoa HOM05D003751 ORTHO05D004765 2.7e-44 183.3 220 92.7
BolC7t45015H Brassica oleracea HOM05D003751 ORTHO05D004765 8.0e-44 181.8 312 74.7
PSO384G1483 Papaver somniferum HOM05D003751 ORTHO05D004765 8.0e-44 181.8 299 91.6
BolC9t53725H Brassica oleracea HOM05D003751 ORTHO05D006139 2.3e-43 180.3 311 78.8
THA.LOC104824065 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 4.0e-43 179.5 297 88.6
CSS0000444 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 1.2e-42 177.9 285 75.8
Gohir.D12G183125 Gossypium hirsutum HOM05D003751 ORTHO05D004765 1.2e-42 177.9 297 84.2
Gohir.D12G183200 Gossypium hirsutum HOM05D003751 ORTHO05D004765 1.2e-42 177.9 297 84.2
BraA09t36376Z Brassica rapa HOM05D003751 ORTHO05D004765 4.4e-42 176.0 316 73.1
FvH4_4g30420 Fragaria vesca HOM05D003751 ORTHO05D004765 9.7e-42 174.9 297 90.6
Gohir.D02G128600 Gossypium hirsutum HOM05D003751 ORTHO05D004765 9.7e-42 174.9 297 87.5
Gorai.005G144300 Gossypium raimondii HOM05D003751 ORTHO05D004765 9.7e-42 174.9 297 87.5
MSTRG.738 Avicennia marina HOM05D003751 ORTHO05D004765 1.3e-41 174.5 301 88.7
SalBow2G0317 Salvia bowleyana HOM05D003751 ORTHO05D004765 1.7e-41 174.1 226 92.9
Aqoxy3G03571 Aquilegia oxysepala HOM05D003751 ORTHO05D004765 3.1e-40 169.9 299 89.3
SHI26375 Sapria himalayana HOM05D003751 ORTHO05D004765 3.1e-40 169.9 220 72.7
ATR0064G031 Amborella trichopoda HOM05D003751 ORTHO05D004765 4.1e-40 169.5 299 87.6
MBI16_g16360_MAGBIO Magnolia biondii HOM05D003751 ORTHO05D004765 4.1e-40 169.5 299 89.0
DCAR_007183 Daucus carota HOM05D003751 ORTHO05D004765 2.0e-39 167.2 318 83.6
MELO3C002928.2 Cucumis melo HOM05D003751 ORTHO05D004765 3.8e-38 162.9 297 88.9
FAN12G0947 Fragaria x ananassa HOM05D003751 ORTHO05D004765 3.8e-38 162.9 315 75.9
CsaV3_5G025510 Cucumis sativus L. HOM05D003751 ORTHO05D004765 6.5e-38 162.2 297 88.9
HPP92_007743 Vanilla planifolia HOM05D003751 ORTHO05D004765 8.5e-38 161.8 299 88.0
Sp1g12050 Schrenkiella parvula HOM05D003751 ORTHO05D004765 2.5e-37 160.2 297 84.5
AL1G25740 Arabidopsis lyrata HOM05D003751 ORTHO05D004765 3.2e-37 159.8 297 84.8
ClCG09G022210 Citrullus lanatus HOM05D003751 ORTHO05D004765 9.4e-37 158.3 301 72.4
AT1G13910 Arabidopsis thaliana HOM05D003751 ORTHO05D004765 1.2e-36 157.9 311 82.0
Thhalv10008166m.g Eutrema salsugineum HOM05D003751 ORTHO05D004765 1.2e-36 157.9 297 86.5
Cpa.g.sc94.5 Carica papaya HOM05D003751 ORTHO05D004765 1.0e-35 154.8 297 53.2
QL03p070738 Quercus lobata HOM05D003751 ORTHO05D004765 1.4e-35 154.5 73 98.6
FAN07G2601 Fragaria x ananassa HOM05D003751 ORTHO05D004765 3.0e-35 153.3 73 97.3
Dinv38780 Davidia involucrata HOM05D003751 ORTHO05D004765 6.8e-35 152.1 73 97.3
ClCG05G023830 Citrullus lanatus HOM05D003751 ORTHO05D004765 7.5e-34 148.7 72 94.4
MELO3C012139.2 Cucumis melo HOM05D003751 ORTHO05D004765 7.5e-34 148.7 72 94.4
vmacro16373 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 1.3e-33 147.9 73 93.2
vmacro23251 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 1.3e-33 147.9 73 93.2
DCAR_005254 Daucus carota HOM05D003751 ORTHO05D004765 2.2e-33 147.1 73 93.2
DCAR_016919 Daucus carota HOM05D003751 ORTHO05D004765 2.2e-33 147.1 73 93.2
Os03g0211900 Oryza sativa ssp. japonica HOM05D003751 ORTHO05D004765 1.1e-32 144.8 73 91.8
Zm00001eb008460 Zea mays HOM05D003751 ORTHO05D004765 1.1e-32 144.8 73 91.8
Carub.0001s1361 Capsella rubella HOM05D003751 ORTHO05D004765 7.0e-32 142.1 220 85.5
CDE04G0854 Ceratophyllum demersum HOM05D003751 ORTHO05D004765 1.6e-31 141.0 73 87.7
Aa31LG1G1100 Aethionema arabicum HOM05D002953 ORTHO05D003249 2.2e-30 137.1 220 84.5
Hund25193 Selenicereus undatus HOM05D003751 ORTHO05D004765 6.5e-30 135.6 74 85.1
Actinidia28633 Actinidia chinensis HOM05D003751 ORTHO05D004765 2.5e-29 133.7 278 82.0
SMO307G0068 Selaginella moellendorffii HOM05D003751 ORTHO05D004765 2.5e-29 133.7 306 78.8
AagrBONN_evm.TU.Sc2ySwM_228.5257 Anthoceros agrestis HOM05D003751 ORTHO05D004765 1.7e-25 120.9 300 77.7
CARHR014280 Cardamine hirsuta HOM05D003751 ORTHO05D004765 5.4e-24 115.9 71 69.0
CSS0008157 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 1.2e-20 104.8 120 90.0
Oeu031422.1 Olea europaea HOM05D003751 ORTHO05D004765 8.0e-20 102.1 52 90.4
Nitab4.5_0017073g0010 Nicotiana tabacum HOM05D003751 ORTHO05D004765 4.0e-19 99.8 65 75.4
Nitab4.5_0004304g0080 Nicotiana tabacum HOM05D003751 ORTHO05D004765 5.2e-19 99.4 74 67.6
Lj3A1031T31 Lonicera japonica HOM05D003751 ORTHO05D004765 6.8e-19 99.0 120 57.5
Sopen05g021560 Solanum pennellii HOM05D003751 ORTHO05D004765 2.2e-17 94.0 53 79.2
SMO239G0097 Selaginella moellendorffii HOM05D003751 ORTHO05D011646 2.9e-17 93.6 64 64.1
Gohir.A03G103400 Gossypium hirsutum HOM05D003751 ORTHO05D004765 3.7e-17 93.2 256 86.7
SMO239G0021 Selaginella moellendorffii HOM05D003751 ORTHO05D011646 5.4e-16 89.4 64 62.5
Sopen05g021540 Solanum pennellii HOM05D003751 ORTHO05D004765 1.6e-12 77.8 46 78.3
RcHm_v2.0_Chr3g0459551 Rosa chinensis HOM05D003751 ORTHO05D004765 2.1e-12 77.4 48 81.2
CAN.G607.6 Capsicum annuum HOM05D003751 ORTHO05D024790 6.2e-12 75.9 41 87.8
Dinv16710 Davidia involucrata HOM05D003751 ORTHO05D004765 1.4e-11 74.7 220 74.5
Gohir.D13G128551 Gossypium hirsutum HOM05D003751 ORTHO05D024790 1.2e-10 71.6 41 85.4
SEGI_40768 Sequoiadendron giganteum HOM05D003751 ORTHO05D004765 5.8e-10 69.3 53 60.4
Gorai.013G144600 Gossypium raimondii HOM05D003751 ORTHO05D024790 9.8e-10 68.6 41 82.9
BolC2t12198H Brassica oleracea HOM05D003751 ORTHO05D017703 4.9e-09 66.2 34 94.1
C02p61470 Brassica napus HOM05D003751 ORTHO05D017703 4.1e-08 63.2 34 88.2
Sopen01g022300 Solanum pennellii HOM05D003751 ORTHO05D004765 4.1e-08 63.2 40 75.0


User provided reference genes

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