Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34072 Davidia involucrata HOM05D001391 ORTHO05D005432 8.7e-183 643.7 361 100.0
CSS0007431 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 8.2e-157 557.4 330 86.1
CSS0028231 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 8.2e-157 557.4 330 86.1
Lj3C1030G23 Lonicera japonica HOM05D001391 ORTHO05D005432 1.2e-155 553.5 330 84.8
CiPaw.06G092300 Carya illinoinensis HOM05D001391 ORTHO05D005432 1.2e-152 543.5 361 79.2
Sopen05g007170 Solanum pennellii HOM05D001391 ORTHO05D005432 6.1e-152 541.2 328 82.6
SGA_v2.0_scaffold16G07780 Striga asiatica HOM05D001391 ORTHO05D005432 6.1e-152 541.2 331 82.2
Actinidia16169 Actinidia chinensis HOM05D001391 ORTHO05D005432 8.8e-151 537.3 315 85.1
DCAR_007192 Daucus carota HOM05D001391 ORTHO05D005432 5.7e-150 534.6 332 82.2
GSVIVG01012214001 Vitis vinifera HOM05D001391 ORTHO05D005432 5.7e-150 534.6 331 81.0
Oeu048144.1 Olea europaea HOM05D001391 ORTHO05D005432 1.7e-149 533.1 312 85.3
Sabra10G0120500 Salix brachista HOM05D001391 ORTHO05D005432 3.7e-149 531.9 332 81.3
Potri.010G158700 Populus trichocarpa HOM05D001391 ORTHO05D005432 4.8e-149 531.6 330 80.6
Cc11_g12040 Coffea canephora HOM05D001391 ORTHO05D005432 1.4e-148 530.0 335 80.6
ECA246G4329 Erigeron canadensis HOM05D001391 ORTHO05D005432 7.0e-148 527.7 330 80.9
QL03p071836 Quercus lobata HOM05D001391 ORTHO05D005432 7.0e-148 527.7 330 79.7
QL03p072323 Quercus lobata HOM05D001391 ORTHO05D005432 9.1e-148 527.3 330 79.4
QL03p071791 Quercus lobata HOM05D001391 ORTHO05D005432 1.6e-147 526.6 330 79.7
CAN.G616.39 Capsicum annuum HOM05D001391 ORTHO05D005432 3.5e-147 525.4 330 81.2
HanXRQChr12g0375271 Helianthus annuus HOM05D001391 ORTHO05D005432 1.0e-146 523.9 330 80.3
HanXRQChr15g0477081 Helianthus annuus HOM05D001391 ORTHO05D005432 1.0e-146 523.9 330 79.7
Manes.01G028100 Manihot esculenta HOM05D001391 ORTHO05D005432 1.0e-146 523.9 326 79.8
TWI31G1273 Tripterygium wilfordii HOM05D001391 ORTHO05D005432 1.0e-146 523.9 330 79.7
Ciclev10031905m.g Citrus clementina HOM05D001391 ORTHO05D005432 2.9e-146 522.3 331 78.9
QL03p071994 Quercus lobata HOM05D001391 ORTHO05D005432 3.2e-145 518.8 329 78.7
QL06p022506 Quercus lobata HOM05D001391 ORTHO05D005432 5.5e-145 518.1 320 80.3
RcHm_v2.0_Chr4g0438441 Rosa chinensis HOM05D001391 ORTHO05D005432 3.6e-144 515.4 319 81.2
PGR102G1705 Punica granatum HOM05D001391 ORTHO05D005432 4.7e-144 515.0 320 80.0
TAR629G1471 Trochodendron aralioides HOM05D001391 ORTHO05D005432 4.7e-144 515.0 332 77.7
TAR629G2660 Trochodendron aralioides HOM05D001391 ORTHO05D005432 4.7e-144 515.0 332 77.7
FvH4_4g30104 Fragaria vesca HOM05D001391 ORTHO05D005432 8.0e-144 514.2 322 80.4
FAN07G1596 Fragaria x ananassa HOM05D001391 ORTHO05D005432 8.0e-144 514.2 323 79.9
PGSC0003DMG400028375 Solanum tuberosum HOM05D001391 ORTHO05D005432 8.0e-144 514.2 311 83.3
QL03p072348 Quercus lobata HOM05D001391 ORTHO05D005432 1.8e-143 513.1 325 78.8
Aqoxy3G03632 Aquilegia oxysepala HOM05D001391 ORTHO05D005432 3.0e-143 512.3 332 80.1
FAN17G2247 Fragaria x ananassa HOM05D001391 ORTHO05D002605 3.0e-143 512.3 352 77.6
Glyma.20G025600 Glycine max HOM05D001391 ORTHO05D005432 3.0e-143 512.3 331 78.5
QL03p071709 Quercus lobata HOM05D001391 ORTHO05D005432 3.0e-143 512.3 322 78.3
MD16G1061600 Malus domestica HOM05D001391 ORTHO05D005432 6.7e-143 511.1 326 78.8
QL03p072246 Quercus lobata HOM05D001391 ORTHO05D005432 6.7e-143 511.1 356 73.6
Duzib248G0196 Durio zibethinus HOM05D001391 ORTHO05D005432 8.8e-143 510.8 331 76.4
Lj4g0006249 Lotus japonicus HOM05D001391 ORTHO05D005432 5.7e-142 508.1 332 77.1
MELO3C011425.2 Cucumis melo HOM05D001391 ORTHO05D005432 7.5e-142 507.7 328 77.1
Eucgr.B03154 Eucalyptus grandis HOM05D001391 ORTHO05D005432 9.7e-142 507.3 326 77.0
Prupe.1G286500 Prunus persica HOM05D001391 ORTHO05D005432 9.7e-142 507.3 326 79.1
arahy.Tifrunner.gnm1.ann1.G55KBL Arachis hypogaea HOM05D001391 ORTHO05D005432 1.3e-141 506.9 328 78.4
MD13G1063100 Malus domestica HOM05D001391 ORTHO05D005432 1.3e-141 506.9 324 79.9
CDE05G0079 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 1.7e-141 506.5 332 77.4
Sed0003297 Sechium edule HOM05D001391 ORTHO05D005432 2.2e-141 506.1 329 76.3
arahy.Tifrunner.gnm1.ann1.52K398 Arachis hypogaea HOM05D001391 ORTHO05D005432 2.8e-141 505.8 330 77.6
Nitab4.5_0001487g0070 Nicotiana tabacum HOM05D001391 ORTHO05D005432 2.4e-140 502.7 317 82.0
Atru.chr11.1633 Acer truncatum HOM05D001391 ORTHO05D005432 5.3e-140 501.5 331 75.5
Thecc.02G331500 Theobroma cacao HOM05D001391 ORTHO05D005432 5.3e-140 501.5 312 79.5
Sed0027135 Sechium edule HOM05D001391 ORTHO05D005432 9.1e-140 500.7 330 74.8
COL.COLO4_27891 Corchorus olitorius HOM05D001391 ORTHO05D005432 1.2e-139 500.4 331 75.5
PSO017G5650 Papaver somniferum HOM05D001391 ORTHO05D005432 2.0e-139 499.6 329 77.5
Psat7g134560 Pisum sativum HOM05D001391 ORTHO05D005432 2.0e-139 499.6 322 78.6
DCAR_030039 Daucus carota HOM05D001391 ORTHO05D005432 3.5e-139 498.8 304 82.6
PSO478G1327 Papaver somniferum HOM05D001391 ORTHO05D005432 5.9e-139 498.0 331 77.0
Ca_18800_v3 Cicer arietinum L. HOM05D001391 ORTHO05D005432 1.0e-138 497.3 325 78.2
Lsat_1_v5_gn_3_53800 Lactuca sativa HOM05D001391 ORTHO05D005432 1.0e-138 497.3 330 76.7
Ah.02g126880 Amaranthus hybridus HOM05D001391 ORTHO05D005432 2.2e-138 496.1 326 76.4
Medtr4g083100 Medicago truncatula HOM05D001391 ORTHO05D005432 3.8e-138 495.4 331 76.7
VMungo0251G0716 Vigna mungo HOM05D001391 ORTHO05D005432 3.8e-138 495.4 357 72.0
Lalb_Chr05g0219941 Lupinus albus HOM05D001391 ORTHO05D005432 1.1e-137 493.8 329 76.0
THA.LOC104824058 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 1.1e-137 493.8 330 74.8
Nitab4.5_0000231g0390 Nicotiana tabacum HOM05D001391 ORTHO05D005432 1.9e-137 493.0 308 82.5
CANSAT64G0915 Cannabis sativa HOM05D001391 ORTHO05D005432 5.5e-137 491.5 326 73.9
FAN22G1389 Fragaria x ananassa HOM05D001391 ORTHO05D005432 1.6e-136 490.0 319 78.4
TPR.G34031 Trifolium pratense HOM05D001391 ORTHO05D005432 2.1e-136 489.6 331 75.2
AUR62003104 Chenopodium quinoa HOM05D001391 ORTHO05D005432 3.0e-135 485.7 318 75.2
THA.LOC104805193 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 3.0e-135 485.7 327 75.2
unitig_22.g6493 Utricularia gibba HOM05D001391 ORTHO05D005432 5.2e-135 485.0 331 76.4
Dinv16729 Davidia involucrata HOM05D001391 ORTHO05D005432 6.8e-135 484.6 277 88.8
Haze_11913 Corylus avellana HOM05D001391 ORTHO05D005432 4.4e-134 481.9 291 82.8
RcHm_v2.0_Chr4g0438461 Rosa chinensis HOM05D001391 ORTHO05D005432 2.2e-133 479.6 328 74.1
EL10Ac6g14993 Beta vulgaris HOM05D001391 ORTHO05D005432 3.7e-133 478.8 308 76.9
BcaB07g30667 Brassica carinata HOM05D001391 ORTHO05D005432 4.8e-133 478.4 327 73.7
ATR0064G010 Amborella trichopoda HOM05D001391 ORTHO05D005432 8.3e-133 477.6 296 79.4
Zm00001eb393170 Zea mays HOM05D001391 ORTHO05D005432 1.1e-132 477.2 323 75.5
vmacro01316 Vaccinium macrocarpon HOM05D001391 ORTHO05D005432 2.4e-132 476.1 329 76.0
A09p24460 Brassica napus HOM05D001391 ORTHO05D005432 5.4e-132 474.9 327 73.1
Migut.L01194 Erythranthe guttata HOM05D001391 ORTHO05D005432 5.4e-132 474.9 314 77.4
BraA09t38039Z Brassica rapa HOM05D001391 ORTHO05D005432 7.0e-132 474.6 327 73.1
BcaC04g21485 Brassica carinata HOM05D001391 ORTHO05D005432 2.0e-131 473.0 327 72.8
C09p31260 Brassica napus HOM05D001391 ORTHO05D005432 2.0e-131 473.0 327 72.8
BolC9t55982H Brassica oleracea HOM05D001391 ORTHO05D005432 2.0e-131 473.0 327 72.8
Thhalv10004477m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 2.0e-131 473.0 331 71.6
Sp2g14420 Schrenkiella parvula HOM05D001391 ORTHO05D005432 3.5e-131 472.2 327 72.2
HPP92_020445 Vanilla planifolia HOM05D001391 ORTHO05D005432 3.5e-131 472.2 310 76.8
AL5G13280 Arabidopsis lyrata HOM05D001391 ORTHO05D005432 7.7e-131 471.1 327 72.2
Gorai.013G093700 Gossypium raimondii HOM05D001391 ORTHO05D005432 1.0e-130 470.7 325 72.9
Aa31LG2G7090 Aethionema arabicum HOM05D001391 ORTHO05D005432 1.7e-130 469.9 327 72.2
BcaC03g17224 Brassica carinata HOM05D001391 ORTHO05D005432 1.1e-129 467.2 326 71.8
C02p51560 Brassica napus HOM05D001391 ORTHO05D005432 1.1e-129 467.2 326 71.8
BolC2t11243H Brassica oleracea HOM05D001391 ORTHO05D005432 1.1e-129 467.2 326 71.8
CARHR145860 Cardamine hirsuta HOM05D001391 ORTHO05D005432 1.5e-129 466.8 327 71.3
AT2G03510 Arabidopsis thaliana HOM05D001391 ORTHO05D005432 1.9e-129 466.5 327 71.3
Gohir.D13G081800 Gossypium hirsutum HOM05D001391 ORTHO05D005432 1.9e-129 466.5 322 73.0
QL03p071737 Quercus lobata HOM05D001391 ORTHO05D005432 3.2e-129 465.7 311 75.9
Carub.0005s0265 Capsella rubella HOM05D001391 ORTHO05D005432 9.4e-129 464.2 327 70.9
TAR622G0883 Trochodendron aralioides HOM05D001391 ORTHO05D005432 8.8e-127 457.6 358 67.6
Hund05837 Selenicereus undatus HOM05D001391 ORTHO05D005432 2.0e-126 456.4 311 75.2
Sabra08G0071900 Salix brachista HOM05D001391 ORTHO05D005432 3.7e-125 452.2 345 70.7
Zm00001eb020150 Zea mays HOM05D001391 ORTHO05D005432 4.9e-125 451.8 316 74.7
PSO478G2440 Papaver somniferum HOM05D001391 ORTHO05D005432 6.3e-125 451.4 313 74.8
QL03p071961 Quercus lobata HOM05D001391 ORTHO05D005432 1.1e-124 450.7 314 72.6
CsaV3_6G032550 Cucumis sativus L. HOM05D001391 ORTHO05D005432 3.1e-124 449.1 325 71.1
Lj6C779T14 Lonicera japonica HOM05D001391 ORTHO05D005432 4.1e-124 448.7 379 65.4
SMO364G0146 Selaginella moellendorffii HOM05D001391 ORTHO05D005432 7.7e-123 444.5 300 72.7
Pp3c1_8060 Physcomitrium patens HOM05D001391 ORTHO05D005432 3.6e-120 435.6 316 69.0
Pp3c2_37740 Physcomitrium patens HOM05D001391 ORTHO05D005432 5.2e-119 431.8 317 69.1
Glyma.07G225600 Glycine max HOM05D001391 ORTHO05D005432 4.9e-117 425.2 268 79.5
AagrBONN_evm.TU.Sc2ySwM_228.3454 Anthoceros agrestis HOM05D001391 ORTHO05D005432 2.4e-116 422.9 317 66.6
Phvul.002G102100 Phaseolus vulgaris HOM05D001391 ORTHO05D005432 5.9e-115 418.3 280 75.7
Mapoly0041s0056 Marchantia polymorpha HOM05D001391 ORTHO05D005432 5.0e-114 415.2 322 64.6
CsaV3_6G033630 Cucumis sativus L. HOM05D001391 ORTHO05D005432 1.2e-112 410.6 336 65.2
CBR_g22084 Chara braunii HOM05D001391 ORTHO05D005432 1.6e-112 410.2 293 69.6
ClCG08G010360 Citrullus lanatus HOM05D001391 ORTHO05D005432 1.6e-112 410.2 295 71.9
Peaxi162Scf00175g00121 Petunia axillaris HOM05D001391 ORTHO05D005432 4.4e-110 402.1 245 80.4
Rhsim12G0074900 Rhododendron simsii HOM05D001391 ORTHO05D005432 1.3e-109 400.6 299 71.2
Cpa.g.sc1.121 Carica papaya HOM05D001391 ORTHO05D005432 1.2e-107 394.0 332 65.1
Solyc05g012340.4 Solanum lycopersicum HOM05D001391 ORTHO05D005432 3.3e-105 386.0 235 83.8
Nn4g23419 Nelumbo nucifera HOM05D001391 ORTHO05D005432 2.1e-104 383.3 332 62.7
AUR62007921 Chenopodium quinoa HOM05D001391 ORTHO05D005432 4.7e-104 382.1 314 62.4
Thhalv10022792m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 4.7e-104 382.1 327 60.2
Thhalv10022979m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 4.7e-104 382.1 327 60.2
MBI16_g24179_MAGBIO Magnolia biondii HOM05D001391 ORTHO05D005432 1.5e-102 377.1 332 63.0
Sc11g0002420 Simmondsia chinensis HOM05D001391 ORTHO05D005432 2.9e-101 372.9 268 73.1
Eucgr.B03155 Eucalyptus grandis HOM05D001391 ORTHO05D005432 1.4e-100 370.5 242 75.2
Thecc.02G331800 Theobroma cacao HOM05D001391 ORTHO05D005432 9.2e-92 341.3 199 81.4
CSS0036366 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 2.1e-91 340.1 233 78.5
CDE02G0606 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 2.7e-91 339.7 205 80.0
Gohir.A13G082200 Gossypium hirsutum HOM05D001391 ORTHO05D005432 3.1e-87 326.2 199 78.9
Nn3g17437 Nelumbo nucifera HOM05D001391 ORTHO05D005432 2.9e-85 319.7 330 56.4
Eucgr.B03159 Eucalyptus grandis HOM05D001391 ORTHO05D005432 4.8e-72 275.8 197 71.6
HanXRQChr08g0223901 Helianthus annuus HOM05D001391 ORTHO05D005432 8.7e-66 255.0 179 76.0
Gohir.D12G164650 Gossypium hirsutum HOM05D001391 ORTHO05D005432 3.3e-65 253.1 259 56.8
Hund25181 Selenicereus undatus HOM05D001391 ORTHO05D005432 6.9e-63 245.4 147 79.6
Gorai.008G177300 Gossypium raimondii HOM05D001391 ORTHO05D005432 2.5e-52 210.3 164 68.9
CSS0025210 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.0e-45 188.3 101 88.1
SEGI_06703 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.9e-37 160.2 117 70.9
SEGI_41081 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 3.2e-36 156.8 119 68.1
Gorai.008G177400 Gossypium raimondii HOM05D001391 ORTHO05D005432 6.1e-35 152.5 82 81.7
Hma1.2p1_1826F.1_g304410 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 2.0e-33 147.5 124 70.2
SEGI_37700 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.0e-33 147.5 115 65.2
QL01p050908 Quercus lobata HOM05D001391 ORTHO05D005432 2.0e-30 137.5 119 58.8
Hma1.2p1_3404F.1_g335810 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 1.5e-28 131.3 115 67.0
Hund25180 Selenicereus undatus HOM05D001391 ORTHO05D005432 4.2e-28 129.8 92 68.5
Mapoly0004s0019 Marchantia polymorpha HOM05D001391 ORTHO05D005432 8.0e-27 125.6 253 29.6
QL03p071882 Quercus lobata HOM05D001391 ORTHO05D005432 1.4e-26 124.8 117 64.1
SEGI_28419 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.0e-21 108.6 83 65.1
Gohir.A13G082366 Gossypium hirsutum HOM05D001391 ORTHO05D005432 6.1e-19 99.4 79 67.1
Os03g0421400 Oryza sativa ssp. japonica HOM05D001391 ORTHO05D005432 2.3e-18 97.4 79 67.1
SEGI_10839 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 5.2e-18 96.3 72 65.3
SEGI_38290 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 3.4e-17 93.6 56 71.4
MD16G1164500 Malus domestica HOM05D001391 ORTHO05D005432 7.0e-15 85.9 52 73.1
BcaB07g30295 Brassica carinata HOM05D001391 ORTHO05D005432 3.5e-14 83.6 79 63.3
QL01p050911 Quercus lobata HOM05D001391 ORTHO05D005432 1.8e-10 71.2 73 58.9


User provided reference genes

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