Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv34051 Davidia involucrata HOM05D006251 ORTHO05D007695 5.9e-82 307.4 144 100.0
Dinv20151 Davidia involucrata HOM05D006251 ORTHO05D007695 1.2e-39 166.8 109 75.2
Actinidia16152 Actinidia chinensis HOM05D006251 ORTHO05D007695 3.6e-39 165.2 109 73.4
COL.COLO4_12139 Corchorus olitorius HOM05D006251 ORTHO05D007695 3.6e-39 165.2 109 74.3
Duzib147G1163 Durio zibethinus HOM05D006251 ORTHO05D007695 3.6e-39 165.2 109 74.3
CSS0009604 Camellia sinensis var. sinensis HOM05D006251 ORTHO05D007695 6.2e-39 164.5 109 74.3
ClCG08G010490 Citrullus lanatus HOM05D006251 ORTHO05D007695 6.2e-39 164.5 109 74.3
Ciclev10032914m.g Citrus clementina HOM05D006251 ORTHO05D007695 6.2e-39 164.5 109 73.4
MELO3C011414.2 Cucumis melo HOM05D006251 ORTHO05D007695 6.2e-39 164.5 109 74.3
CsaV3_6G033740 Cucumis sativus L. HOM05D006251 ORTHO05D007695 6.2e-39 164.5 109 74.3
Gohir.A12G057700 Gossypium hirsutum HOM05D006251 ORTHO05D007695 6.2e-39 164.5 109 74.3
Gorai.008G060600 Gossypium raimondii HOM05D006251 ORTHO05D007695 6.2e-39 164.5 109 74.3
Thecc.01G144600 Theobroma cacao HOM05D006251 ORTHO05D007695 6.2e-39 164.5 109 74.3
vmacro10437 Vaccinium macrocarpon HOM05D006251 ORTHO05D007695 6.2e-39 164.5 109 73.4
QL03p073745 Quercus lobata HOM05D006251 ORTHO05D007695 8.1e-39 164.1 109 73.4
GSVIVG01010778001 Vitis vinifera HOM05D006251 ORTHO05D007695 8.1e-39 164.1 109 73.4
Rhsim09G0125900 Rhododendron simsii HOM05D000634 ORTHO05D007695 1.1e-38 163.7 109 72.5
TWI79G1568 Tripterygium wilfordii HOM05D006251 ORTHO05D007695 1.4e-38 163.3 109 73.4
Cc11_g11800 Coffea canephora HOM05D006251 ORTHO05D007695 1.8e-38 162.9 109 72.5
Eucgr.G02430 Eucalyptus grandis HOM05D006251 ORTHO05D007695 1.8e-38 162.9 109 72.5
MBI16_g03090_MAGBIO Magnolia biondii HOM05D006251 ORTHO05D007695 1.8e-38 162.9 109 73.4
MD13G1060000 Malus domestica HOM05D006251 ORTHO05D007695 1.8e-38 162.9 109 72.5
MD16G1059400 Malus domestica HOM05D006251 ORTHO05D007695 1.8e-38 162.9 109 72.5
Phvul.003G040600 Phaseolus vulgaris HOM05D006251 ORTHO05D007695 2.3e-38 162.5 109 72.5
VMungo1215G0794 Vigna mungo HOM05D006251 ORTHO05D007695 2.3e-38 162.5 109 72.5
CiPaw.05G123800 Carya illinoinensis HOM05D006251 ORTHO05D007695 3.1e-38 162.2 109 72.5
DCAR_030047 Daucus carota HOM05D006251 ORTHO05D007695 3.1e-38 162.2 109 72.5
PGR119G0343 Punica granatum HOM05D006251 ORTHO05D007695 3.1e-38 162.2 109 72.5
Sc04g0007470 Simmondsia chinensis HOM05D006251 ORTHO05D007695 4.0e-38 161.8 109 72.5
HPP92_017644 Vanilla planifolia HOM05D006251 ORTHO05D007695 4.0e-38 161.8 109 71.6
Atru.chr11.1602 Acer truncatum HOM05D006251 ORTHO05D007695 5.2e-38 161.4 108 73.1
arahy.Tifrunner.gnm1.ann1.5K1Z4H Arachis hypogaea HOM05D006251 ORTHO05D007695 5.2e-38 161.4 109 71.6
arahy.Tifrunner.gnm1.ann1.BKZY3B Arachis hypogaea HOM05D006251 ORTHO05D007695 5.2e-38 161.4 109 71.6
Migut.E00044 Erythranthe guttata HOM05D006251 ORTHO05D007695 5.2e-38 161.4 109 71.6
Glyma.02G120500 Glycine max HOM05D006251 ORTHO05D007695 5.2e-38 161.4 109 71.6
Gohir.D12G057500 Gossypium hirsutum HOM05D006251 ORTHO05D007695 5.2e-38 161.4 105 76.2
Nn3g17499 Nelumbo nucifera HOM05D006251 ORTHO05D007695 5.2e-38 161.4 109 72.5
Cfa008862 Carpinus fangiana HOM05D006251 ORTHO05D007695 6.8e-38 161.0 109 72.5
Haze_11885 Corylus avellana HOM05D006251 ORTHO05D007695 6.8e-38 161.0 109 72.5
HanXRQChr15g0477161 Helianthus annuus HOM05D006251 ORTHO05D007695 6.8e-38 161.0 109 71.6
Prupe.1G289400 Prunus persica HOM05D006251 ORTHO05D007695 6.8e-38 161.0 109 71.6
CANSAT64G0858 Cannabis sativa HOM05D006251 ORTHO05D007695 8.9e-38 160.6 108 72.2
Ca_05001_v3 Cicer arietinum L. HOM05D006251 ORTHO05D007695 8.9e-38 160.6 109 71.6
Lalb_Chr10g0098941 Lupinus albus HOM05D006251 ORTHO05D007695 8.9e-38 160.6 109 71.6
CDE07G1948 Ceratophyllum demersum HOM05D006251 ORTHO05D007695 1.2e-37 160.2 109 71.6
Glyma.01G062300 Glycine max HOM05D006251 ORTHO05D007695 1.2e-37 160.2 109 71.6
Manes.01G026600 Manihot esculenta HOM05D006251 ORTHO05D007695 1.2e-37 160.2 108 72.2
Solyc04g005350.3 Solanum lycopersicum HOM05D006251 ORTHO05D007695 1.2e-37 160.2 109 71.6
Sopen04g001330 Solanum pennellii HOM05D006251 ORTHO05D007695 1.2e-37 160.2 109 71.6
Aqoxy3G00920 Aquilegia oxysepala HOM05D006251 ORTHO05D007695 1.5e-37 159.8 109 71.6
MSTRG.2302 Avicennia marina HOM05D006251 ORTHO05D007695 1.5e-37 159.8 108 72.2
EL10Ac6g15019 Beta vulgaris HOM05D006251 ORTHO05D007695 1.5e-37 159.8 109 70.6
ECA246G1802 Erigeron canadensis HOM05D006251 ORTHO05D007695 2.0e-37 159.5 109 70.6
Medtr5g044970 Medicago truncatula HOM05D006251 ORTHO05D007695 2.0e-37 159.5 109 70.6
TPR.G23760 Trifolium pratense HOM05D006251 ORTHO05D007695 2.0e-37 159.5 109 70.6
Ah.03g138780 Amaranthus hybridus HOM05D006251 ORTHO05D007695 3.4e-37 158.7 109 70.6
AUR62007897 Chenopodium quinoa HOM05D006251 ORTHO05D007695 3.4e-37 158.7 109 70.6
Sed0021896 Sechium edule HOM05D006251 ORTHO05D007695 3.4e-37 158.7 109 70.6
FAN22G1444 Fragaria x ananassa HOM05D006251 ORTHO05D007695 4.4e-37 158.3 108 70.4
Psat2g131760 Pisum sativum HOM05D006251 ORTHO05D007695 4.4e-37 158.3 109 69.7
PSO017G1239 Papaver somniferum HOM05D006251 ORTHO05D007695 5.8e-37 157.9 108 71.3
Lsat_1_v5_gn_3_53680 Lactuca sativa HOM05D006251 ORTHO05D007695 7.5e-37 157.5 109 69.7
RcHm_v2.0_Chr4g0437961 Rosa chinensis HOM05D006251 ORTHO05D007695 7.5e-37 157.5 108 70.4
TAR622G1376 Trochodendron aralioides HOM05D006251 ORTHO05D007695 7.5e-37 157.5 108 70.4
AL1G25480 Arabidopsis lyrata HOM05D006251 ORTHO05D007695 9.9e-37 157.1 108 69.4
Carub.0001s1343 Capsella rubella HOM05D006251 ORTHO05D007695 9.9e-37 157.1 108 69.4
CARHR014090 Cardamine hirsuta HOM05D006251 ORTHO05D007695 9.9e-37 157.1 108 69.4
Thhalv10008898m.g Eutrema salsugineum HOM05D006251 ORTHO05D007695 9.9e-37 157.1 108 69.4
FAN07G0390 Fragaria x ananassa HOM05D000634 ORTHO05D007695 9.9e-37 157.1 108 69.4
Lj2g0007519 Lotus japonicus HOM05D006251 ORTHO05D007695 9.9e-37 157.1 109 69.7
Sp1g12220 Schrenkiella parvula HOM05D006251 ORTHO05D007695 9.9e-37 157.1 108 69.4
FvH4_4g29710 Fragaria vesca HOM05D006251 ORTHO05D007695 1.3e-36 156.8 108 70.4
FAN12G1640 Fragaria x ananassa HOM05D006251 ORTHO05D007695 1.3e-36 156.8 108 70.4
PSO478G0833 Papaver somniferum HOM05D006251 ORTHO05D007695 1.3e-36 156.8 108 70.4
Zm00001eb219260 Zea mays HOM05D006251 ORTHO05D007695 1.7e-36 156.4 109 68.8
THA.LOC104812006 Tarenaya hassleriana HOM05D006251 ORTHO05D007695 2.2e-36 156.0 109 67.9
AT1G13690 Arabidopsis thaliana HOM05D006251 ORTHO05D007695 2.9e-36 155.6 108 68.5
BcaB02g06466 Brassica carinata HOM05D006251 ORTHO05D007695 2.9e-36 155.6 108 68.5
BcaC05g25275 Brassica carinata HOM05D006251 ORTHO05D007695 2.9e-36 155.6 108 68.5
C05p11520 Brassica napus HOM05D006251 ORTHO05D007695 2.9e-36 155.6 108 68.5
BraA06t24166Z Brassica rapa HOM05D006251 ORTHO05D007695 2.9e-36 155.6 108 68.5
unitig_22.g6893 Utricularia gibba HOM05D006251 ORTHO05D007695 2.9e-36 155.6 109 68.8
Aa31LG1G1230 Aethionema arabicum HOM05D006251 ORTHO05D007695 4.9e-36 154.8 108 68.5
BolC5t29901H Brassica oleracea HOM05D006251 ORTHO05D007695 4.9e-36 154.8 108 68.5
FAN17G1351 Fragaria x ananassa HOM05D006251 ORTHO05D007695 6.4e-36 154.5 108 69.4
SalBow2G3351 Salvia bowleyana HOM05D006251 ORTHO05D007695 6.4e-36 154.5 108 68.5
SGA_v2.0_scaffold59G20670 Striga asiatica HOM05D006251 ORTHO05D007695 8.3e-36 154.1 109 67.9
Potri.008G097500 Populus trichocarpa HOM05D006251 ORTHO05D007695 2.4e-35 152.5 103 70.9
Nitab4.5_0001118g0050 Nicotiana tabacum HOM05D006251 ORTHO05D007695 7.1e-35 151.0 102 71.6
Nitab4.5_0008776g0040 Nicotiana tabacum HOM05D006251 ORTHO05D007695 1.6e-34 149.8 102 70.6
ATR0827G163 Amborella trichopoda HOM05D006251 ORTHO05D007695 2.1e-34 149.4 109 67.0
Peaxi162Scf00667g00025 Petunia axillaris HOM05D006251 ORTHO05D007695 3.5e-34 148.7 102 70.6
Lj3A1029T38 Lonicera japonica HOM05D006251 ORTHO05D007695 3.9e-33 145.2 139 56.1
Mapoly0003s0262 Marchantia polymorpha HOM05D006251 ORTHO05D007695 2.5e-32 142.5 108 63.9
PGSC0003DMG400001940 Solanum tuberosum HOM05D006251 ORTHO05D007695 1.6e-31 139.8 151 51.7
SEGI_14342 Sequoiadendron giganteum HOM05D006251 ORTHO05D007695 1.8e-30 136.3 103 64.1
Pp3c23_9430 Physcomitrium patens HOM05D006251 ORTHO05D007695 5.2e-30 134.8 109 58.7
SMO356G0419 Selaginella moellendorffii HOM05D006251 ORTHO05D007695 6.8e-30 134.4 109 58.7
AagrBONN_evm.TU.Sc2ySwM_344.2145 Anthoceros agrestis HOM05D006251 ORTHO05D007695 8.4e-28 127.5 103 57.3
Haze_20966 Corylus avellana HOM05D006251 ORTHO05D007695 3.5e-26 122.1 121 53.7
Hma1.2p1_0566F.1_g179960 Hydrangea macrophylla HOM05D006251 ORTHO05D007695 7.8e-26 120.9 90 65.6
Sed0015628 Sechium edule HOM05D006251 ORTHO05D007695 1.0e-25 120.6 90 66.7
Pp3c24_3880 Physcomitrium patens HOM05D006251 ORTHO05D007695 3.3e-24 115.5 95 57.9
GSVIVG01010785001 Vitis vinifera HOM05D006251 ORTHO05D007695 3.3e-24 115.5 54 96.3
Potri.010G157000 Populus trichocarpa HOM05D006251 ORTHO05D007695 4.3e-24 115.2 90 64.4
AUR62003080 Chenopodium quinoa HOM05D006251 ORTHO05D007695 1.6e-23 113.2 83 67.5
CBR_g6581 Chara braunii HOM05D006251 ORTHO05D007695 4.7e-23 111.7 60 83.3
Migut.K00754 Erythranthe guttata HOM05D006251 ORTHO05D007695 6.9e-22 107.8 54 88.9
Cre06.g288750 Chlamydomonas reinhardtii HOM05D006251 ORTHO05D007695 2.0e-21 106.3 112 46.4
CBR_g28640 Chara braunii HOM05D006251 ORTHO05D007695 6.4e-20 101.3 90 55.6
MCO13G196 Micromonas commoda HOM05D006251 ORTHO05D007695 7.1e-19 97.8 97 51.5
SMO356G0608 Selaginella moellendorffii HOM05D006251 ORTHO05D007695 7.3e-16 87.8 54 70.4
SMO340G0125 Selaginella moellendorffii HOM05D006251 ORTHO05D007695 3.6e-15 85.5 54 68.5
SalBow6G1459 Salvia bowleyana HOM05D006251 ORTHO05D007695 1.3e-12 77.0 86 48.8
Cpa.g.sc1.151 Carica papaya HOM05D006251 ORTHO05D007695 1.7e-12 76.6 67 58.2
PRCOL_00002021 Prasinoderma coloniale HOM05D006251 ORTHO05D007695 4.2e-11 72.0 110 38.2
Nitab4.5_0007615g0010 Nicotiana tabacum HOM05D006251 ORTHO05D007695 9.3e-11 70.9 102 41.2
SalBow7G0227 Salvia bowleyana HOM05D006251 ORTHO05D007695 4.3e-08 62.0 99 42.4


User provided reference genes

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