Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 1.1e-68 263.1 128 100.0
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 5.1e-37 157.9 109 77.1
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 2.6e-33 145.6 109 67.0
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 7.9e-30 134.0 109 63.3
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 1.5e-28 129.8 111 64.9
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 5.7e-28 127.9 110 59.1
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 5.7e-28 127.9 110 59.1
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 1.7e-27 126.3 113 61.1
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.7e-27 126.3 109 59.6
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 2.2e-27 125.9 109 59.6
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 3.7e-27 125.2 109 61.5
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 8.2e-27 124.0 110 58.2
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 3.1e-26 122.1 109 59.6
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 5.3e-26 121.3 108 61.1
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 1.2e-25 120.2 111 60.4
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 7.7e-25 117.5 109 53.2
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 2.2e-24 115.9 109 57.8
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 2.2e-24 115.9 109 56.9
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 3.2e-23 112.1 99 58.6
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 5.5e-23 111.3 112 54.5
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 9.4e-23 110.5 114 57.0
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 2.7e-22 109.0 101 61.4
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.7e-22 109.0 114 57.0
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 2.7e-22 109.0 114 57.0
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.0e-21 107.1 110 57.3
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 3.0e-21 105.5 110 55.5
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 6.7e-21 104.4 98 59.2
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 8.8e-21 104.0 109 53.2
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 8.8e-21 104.0 105 48.6
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 1.1e-20 103.6 115 55.7
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 3.3e-20 102.1 114 50.9
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 9.7e-20 100.5 111 51.4
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 2.8e-19 99.0 112 52.7
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 3.7e-19 98.6 110 57.3
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 4.8e-19 98.2 109 46.8
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 6.3e-19 97.8 109 56.9
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.4e-18 95.9 113 56.6
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 5.3e-18 94.7 109 50.5
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 7.0e-18 94.4 110 49.1
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 9.1e-18 94.0 111 45.9
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 9.1e-18 94.0 107 51.4
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.6e-17 93.2 110 48.2
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 1.6e-17 93.2 101 54.5
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 3.5e-17 92.0 112 48.2
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 3.5e-17 92.0 98 48.0
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 7.7e-17 90.9 120 43.3
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 7.7e-17 90.9 115 46.1
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 1.0e-16 90.5 110 50.9
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.3e-16 90.1 108 51.9
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 2.2e-16 89.4 116 48.3
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 2.9e-16 89.0 120 46.7
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 3.8e-16 88.6 110 50.9
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 3.8e-16 88.6 115 50.4
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 5.0e-16 88.2 75 60.0
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 6.5e-16 87.8 112 43.8
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 8.5e-16 87.4 110 46.4
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 1.9e-15 86.3 114 46.5
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 2.5e-15 85.9 112 45.5
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 3.2e-15 85.5 115 47.0
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 3.2e-15 85.5 105 51.4
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 3.2e-15 85.5 105 51.4
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 4.2e-15 85.1 84 48.8
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 5.5e-15 84.7 86 52.3
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 4.7e-14 81.6 84 56.0
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 4.7e-14 81.6 111 46.8
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 6.1e-14 81.3 112 47.3
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 6.1e-14 81.3 119 47.1
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.3e-13 79.3 73 58.9
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 3.0e-13 79.0 84 46.4
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 3.0e-13 79.0 113 40.7
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 5.2e-13 78.2 79 54.4
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 8.8e-13 77.4 90 44.4
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 8.8e-13 77.4 90 44.4
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 9.8e-12 73.9 70 52.9
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 1.3e-11 73.6 109 40.4
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 1.3e-11 73.6 94 43.6
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 1.7e-11 73.2 113 44.2
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 1.7e-11 73.2 110 40.9
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.2e-11 72.8 116 43.1
HanXRQChr11g0325281 Helianthus annuus HOM05D007637 ORTHO05D009508 1.4e-10 70.1 114 40.4
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 1.8e-10 69.7 85 48.2
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 1.8e-10 69.7 107 41.1
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 2.4e-10 69.3 109 40.4
Nitab4.5_0002644g0060 Nicotiana tabacum HOM05D007637 ORTHO05D009508 3.1e-10 68.9 94 47.9
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 7.0e-10 67.8 112 42.0
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 9.1e-10 67.4 88 43.2
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 3.5e-09 65.5 61 54.1
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 1.0e-08 63.9 94 42.6
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 1.0e-08 63.9 94 42.6
Phvul.007G035600 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 1.3e-08 63.5 109 34.9
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 1.7e-08 63.2 115 39.1
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 2.2e-08 62.8 98 41.8
Solyc04g007585.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 2.9e-08 62.4 113 36.3
ECA232G5064 Erigeron canadensis HOM05D007637 ORTHO05D009508 1.5e-07 60.1 76 48.7


User provided reference genes

Program Settings