Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33973 Davidia involucrata HOM05D007158 ORTHO05D007424 5.3e-113 411.4 264 100.0
Dinv14854 Davidia involucrata HOM05D007158 ORTHO05D007424 1.1e-52 211.1 203 71.9
Hma1.2p1_0500F.1_g167110 Hydrangea macrophylla HOM05D007158 ORTHO05D007424 7.6e-51 204.9 269 60.6
TAR629G2388 Trochodendron aralioides HOM05D007158 ORTHO05D007424 1.1e-49 201.1 272 58.5
Cfa007880 Carpinus fangiana HOM05D007158 ORTHO05D007424 7.3e-46 188.3 266 50.4
Actinidia17647 Actinidia chinensis HOM05D007158 ORTHO05D007424 8.1e-45 184.9 270 62.2
QL02p049322 Quercus lobata HOM05D007158 ORTHO05D007424 5.4e-41 172.2 266 53.4
Rhsim08G0084200 Rhododendron simsii HOM05D007158 ORTHO05D007424 1.3e-39 167.5 266 51.9
TAR374G0148 Trochodendron aralioides HOM05D007158 ORTHO05D007424 2.3e-39 166.8 284 53.2
GSVIVG01030945001 Vitis vinifera HOM05D007158 ORTHO05D007424 6.6e-39 165.2 273 57.1
Duzib138G0519 Durio zibethinus HOM05D007158 ORTHO05D007424 1.5e-38 164.1 268 51.1
Thecc.04G126100 Theobroma cacao HOM05D007158 ORTHO05D007424 1.5e-38 164.1 267 51.7
Oeu047435.1 Olea europaea HOM05D007158 ORTHO05D007424 7.3e-38 161.8 269 52.4
COL.COLO4_03615 Corchorus olitorius HOM05D007158 ORTHO05D007424 9.6e-38 161.4 222 55.4
CiPaw.04G044500 Carya illinoinensis HOM05D007158 ORTHO05D007424 1.6e-37 160.6 265 46.8
Gohir.D11G167600 Gossypium hirsutum HOM05D007158 ORTHO05D007424 1.6e-37 160.6 267 49.8
Gorai.007G178700 Gossypium raimondii HOM05D007158 ORTHO05D007424 1.6e-37 160.6 267 49.8
Rhsim10G0076900 Rhododendron simsii HOM05D007158 ORTHO05D007424 6.2e-37 158.7 261 47.1
Gohir.A11G161300 Gossypium hirsutum HOM05D007158 ORTHO05D007424 6.9e-36 155.2 267 49.1
Cc07_g08430 Coffea canephora HOM05D007158 ORTHO05D007424 1.2e-35 154.5 271 48.0
Ciclev10012598m.g Citrus clementina HOM05D007158 ORTHO05D007424 4.5e-35 152.5 265 40.8
Lsat_1_v5_gn_4_156301 Lactuca sativa HOM05D007158 ORTHO05D007424 1.7e-34 150.6 270 49.6
MELO3C010379.2 Cucumis melo HOM05D007158 ORTHO05D007424 2.2e-34 150.2 279 41.2
Prupe.3G150100 Prunus persica HOM05D007158 ORTHO05D007424 8.4e-34 148.3 266 46.2
ECA232G0903 Erigeron canadensis HOM05D007158 ORTHO05D007424 1.1e-33 147.9 227 55.1
Duzib133G0688 Durio zibethinus HOM05D007158 ORTHO05D007424 1.9e-33 147.1 227 53.7
ClCG07G016450 Citrullus lanatus HOM05D007158 ORTHO05D007424 2.4e-33 146.7 276 40.6
Potri.017G121000 Populus trichocarpa HOM05D007158 ORTHO05D007424 3.2e-33 146.4 284 45.4
Eucgr.F02798 Eucalyptus grandis HOM05D007158 ORTHO05D007424 4.2e-33 146.0 274 45.6
Atru.chr1.1578 Acer truncatum HOM05D007158 ORTHO05D007424 9.3e-33 144.8 220 50.5
Nn4g24036 Nelumbo nucifera HOM05D007158 ORTHO05D007424 9.3e-33 144.8 271 53.1
Lj4A182G65 Lonicera japonica HOM05D007158 ORTHO05D007424 2.1e-32 143.7 160 53.1
MD09G1258200 Malus domestica HOM05D007158 ORTHO05D007424 7.9e-32 141.7 232 50.0
PGR004G0702 Punica granatum HOM05D007158 ORTHO05D007424 1.0e-31 141.4 268 41.0
CAN.G225.14 Capsicum annuum HOM05D007158 ORTHO05D007424 6.6e-31 138.7 272 46.7
DCAR_025891 Daucus carota HOM05D007158 ORTHO05D007424 1.9e-30 137.1 227 45.8
Nitab4.5_0002644g0050 Nicotiana tabacum HOM05D007158 ORTHO05D007424 5.6e-30 135.6 280 47.1
Sabra17G0103400 Salix brachista HOM05D007158 ORTHO05D007424 1.6e-29 134.0 238 44.5
Solyc02g063280.4 Solanum lycopersicum HOM05D007158 ORTHO05D007424 1.6e-29 134.0 278 46.4
Sopen02g014350 Solanum pennellii HOM05D007158 ORTHO05D007424 2.1e-29 133.7 276 46.7
PGSC0003DMG400010413 Solanum tuberosum HOM05D007158 ORTHO05D007424 3.6e-29 132.9 278 46.4
CsaV3_4G010370 Cucumis sativus L. HOM05D007158 ORTHO05D007424 4.8e-29 132.5 276 40.2
Manes.01G113800 Manihot esculenta HOM05D007158 ORTHO05D007424 4.8e-29 132.5 267 48.7
Phvul.008G009100 Phaseolus vulgaris HOM05D007158 ORTHO05D007424 4.8e-29 132.5 268 45.1
Potri.004G094500 Populus trichocarpa HOM05D007158 ORTHO05D007424 4.8e-29 132.5 286 43.4
TWI74G0884 Tripterygium wilfordii HOM05D007158 ORTHO05D007424 4.8e-29 132.5 267 50.2
Nitab4.5_0000036g0590 Nicotiana tabacum HOM05D007158 ORTHO05D007424 1.1e-28 131.3 287 46.7
Cpa.g.sc170.15 Carica papaya HOM05D007158 ORTHO05D007424 1.4e-28 131.0 279 41.6
HanXRQChr09g0262471 Helianthus annuus HOM05D007158 ORTHO05D007424 1.4e-28 131.0 189 46.0
MSTRG.2781 Avicennia marina HOM05D007158 ORTHO05D007424 2.4e-28 130.2 228 50.4
Glyma.18G293000 Glycine max HOM05D007158 ORTHO05D007424 6.9e-28 128.6 271 48.0
vmacro18064 Vaccinium macrocarpon HOM05D007158 ORTHO05D007424 1.2e-27 127.9 212 55.7
Ah.10g037870 Amaranthus hybridus HOM05D007158 ORTHO05D007424 5.8e-27 125.6 213 46.0
Migut.H00250 Erythranthe guttata HOM05D007158 ORTHO05D007424 5.8e-27 125.6 267 38.6
Peaxi162Scf00343g00058 Petunia axillaris HOM05D007158 ORTHO05D007424 1.3e-26 124.4 226 50.0
SGA_v2.0_scaffold202G41480 Striga asiatica HOM05D007158 ORTHO05D007424 1.7e-26 124.0 280 43.6
CANSAT78G1746 Cannabis sativa HOM05D007158 ORTHO05D007424 3.8e-26 122.9 210 50.0
Glyma.02G090200 Glycine max HOM05D007158 ORTHO05D007424 3.8e-26 122.9 266 39.1
Lalb_Chr10g0091481 Lupinus albus HOM05D007158 ORTHO05D007424 6.4e-26 122.1 212 40.1
Hund13698 Selenicereus undatus HOM05D007158 ORTHO05D007424 1.4e-25 120.9 288 44.8
Aqoxy3G00164 Aquilegia oxysepala HOM05D007158 ORTHO05D007424 5.5e-25 119.0 240 47.5
Sc10g0001000 Simmondsia chinensis HOM05D007158 ORTHO05D007424 7.1e-25 118.6 233 45.9
AUR62023262 Chenopodium quinoa HOM05D007158 ORTHO05D007424 1.2e-24 117.9 212 45.8
CDE04G0479 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 1.6e-24 117.5 290 34.8
RcHm_v2.0_Chr1g0332591 Rosa chinensis HOM05D007158 ORTHO05D007424 2.7e-24 116.7 265 40.8
ATR0743G078 Amborella trichopoda HOM05D007158 ORTHO05D007424 6.0e-24 115.5 266 46.2
Haze_14197 Corylus avellana HOM05D007158 ORTHO05D007424 1.3e-23 114.4 192 42.2
CDE06G2846 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 1.8e-23 114.0 231 42.9
PSO339G0418 Papaver somniferum HOM05D007158 ORTHO05D007424 1.8e-23 114.0 166 47.6
Sed0005493 Sechium edule HOM05D007158 ORTHO05D007424 5.6e-22 109.0 163 41.7
Rhsim10G0074300 Rhododendron simsii HOM05D007158 ORTHO05D007424 9.6e-22 108.2 223 40.8
Os01g0505700 Oryza sativa ssp. japonica HOM05D007158 ORTHO05D007424 2.8e-21 106.7 175 44.6
EL10Ac2g04517 Beta vulgaris HOM05D007158 ORTHO05D007424 3.7e-21 106.3 219 41.6
Zm00001eb300940 Zea mays HOM05D007158 ORTHO05D007424 4.8e-21 105.9 161 46.0
Lj1g0013464 Lotus japonicus HOM05D007158 ORTHO05D007424 1.4e-20 104.4 214 38.8
HPP92_023114 Vanilla planifolia HOM05D007158 ORTHO05D007424 1.4e-20 104.4 279 43.7
VMungo1383G1080 Vigna mungo HOM05D007158 ORTHO05D007424 1.4e-20 104.4 268 40.3
arahy.Tifrunner.gnm1.ann1.5M3IQK Arachis hypogaea HOM05D007158 ORTHO05D007424 3.1e-20 103.2 208 46.2
Sabra04G0063800 Salix brachista HOM05D007158 ORTHO05D007424 3.1e-20 103.2 221 41.2
Medtr7g082850 Medicago truncatula HOM05D007158 ORTHO05D007424 5.3e-20 102.4 234 38.0
FAN10G2330 Fragaria x ananassa HOM05D007158 ORTHO05D007424 6.9e-20 102.1 220 44.1
FvH4_7g05720 Fragaria vesca HOM05D007158 ORTHO05D007424 9.0e-20 101.7 228 39.9
FAN01G1160 Fragaria x ananassa HOM05D007158 ORTHO05D007424 9.0e-20 101.7 228 39.9
arahy.Tifrunner.gnm1.ann1.896A9W Arachis hypogaea HOM05D007158 ORTHO05D007424 2.6e-19 100.1 208 46.6
Sabra17G0100100 Salix brachista HOM05D007158 ORTHO05D007424 3.4e-19 99.8 211 38.9
TPR.G28397 Trifolium pratense HOM05D007158 ORTHO05D007424 1.7e-18 97.4 216 40.3
Oeu061824.1 Olea europaea HOM05D007158 ORTHO05D007424 3.8e-18 96.3 162 44.4
PSO384G2845 Papaver somniferum HOM05D007158 ORTHO05D007424 1.1e-17 94.7 118 52.5
Psat3g097040 Pisum sativum HOM05D007158 ORTHO05D007424 2.1e-16 90.5 276 34.1
FAN23G0239 Fragaria x ananassa HOM05D007158 ORTHO05D007424 4.6e-16 89.4 254 37.4
FAN03G1259 Fragaria x ananassa HOM05D007158 ORTHO05D007424 8.7e-15 85.1 226 33.6
Ca_08098_v3 Cicer arietinum L. HOM05D007158 ORTHO05D007424 1.5e-14 84.3 216 33.8
FAN04G1654 Fragaria x ananassa HOM05D007158 ORTHO05D007424 5.7e-14 82.4 226 33.2
THA.LOC104809979 Tarenaya hassleriana HOM05D007158 ORTHO05D007424 1.5e-11 74.3 276 27.9
SHI25695 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-11 73.2 107 43.0
SMO119G0024 Selaginella moellendorffii HOM05D007158 ORTHO05D007424 8.5e-10 68.6 94 44.7
Mapoly0099s0058 Marchantia polymorpha HOM05D007158 ORTHO05D007424 1.9e-09 67.4 174 33.9
Pp3c14_9040 Physcomitrium patens HOM05D007158 ORTHO05D007424 1.6e-08 64.3 87 44.8
Sp2g04080 Schrenkiella parvula HOM05D011338 ORTHO05D007424 1.6e-08 64.3 84 39.3
BraA01t03075Z Brassica rapa HOM05D011338 ORTHO05D007424 2.7e-08 63.5 78 39.7
A01p29410 Brassica napus HOM05D011338 ORTHO05D007424 4.6e-08 62.8 76 39.5
Haze_14196 Corylus avellana HOM05D007158 ORTHO05D007424 6.1e-08 62.4 75 56.0
Carub.0002s0469 Capsella rubella HOM05D007158 ORTHO05D007424 1.3e-07 61.2 74 40.5
MBI16_g21167_MAGBIO Magnolia biondii HOM05D007158 ORTHO05D007424 1.3e-07 61.2 73 56.2
CBR_g32195 Chara braunii HOM05D007158 ORTHO05D007424 1.8e-07 60.8 97 40.2
AL2G15950 Arabidopsis lyrata HOM05D011338 ORTHO05D007424 2.3e-07 60.5 101 33.7
BolC1t03688H Brassica oleracea HOM05D011338 ORTHO05D007424 8.7e-07 58.5 211 34.1
Aa31LG2G9720 Aethionema arabicum HOM05D011338 ORTHO05D007424 1.1e-06 58.2 197 33.0
AagrBONN_evm.TU.Sc2ySwM_117.711 Anthoceros agrestis HOM05D007158 ORTHO05D007424 1.1e-06 58.2 196 29.6
Thhalv10023615m.g Eutrema salsugineum HOM05D011338 ORTHO05D007424 1.1e-06 58.2 84 34.5
Rhsim10G0057600 Rhododendron simsii HOM05D000142 ORTHO05D339295 1.9e-06 57.4 32 84.4
AT1G60640 Arabidopsis thaliana HOM05D007158 ORTHO05D007424 7.4e-06 55.5 210 29.5
CSS0048374 Camellia sinensis var. sinensis HOM05D048559 ORTHO05D007424 7.4e-06 55.5 106 50.0
BcaC09g49385 Brassica carinata HOM05D011338 ORTHO05D007424 9.7e-06 55.1 207 33.3
C01p37190 Brassica napus HOM05D011338 ORTHO05D007424 9.7e-06 55.1 207 33.3
CARHR052290 Cardamine hirsuta HOM05D007158 ORTHO05D007424 9.7e-06 55.1 198 30.8
MD00G1054400 Malus domestica HOM05D007158 ORTHO05D007424 9.7e-06 55.1 79 41.8


User provided reference genes

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