Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 2.2e-199 698.7 341 100.0
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 2.0e-157 559.3 346 79.8
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 5.6e-155 551.2 339 79.4
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 3.6e-154 548.5 341 78.9
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 3.7e-151 538.5 335 77.6
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 8.3e-151 537.3 332 79.2
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 2.4e-150 535.8 334 77.5
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 1.3e-148 530.0 342 74.9
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 3.0e-148 528.9 344 75.3
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 2.5e-147 525.8 337 76.0
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 4.3e-147 525.0 344 74.1
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 4.3e-147 525.0 337 74.8
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 5.6e-147 524.6 341 74.8
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 2.8e-146 522.3 326 77.0
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 3.6e-146 521.9 340 74.1
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 1.4e-145 520.0 333 75.7
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 1.4e-145 520.0 336 74.7
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 8.9e-145 517.3 345 74.8
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 2.0e-144 516.2 343 72.6
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 2.6e-144 515.8 342 73.4
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 9.8e-144 513.8 340 74.7
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 2.9e-143 512.3 343 74.3
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 1.4e-142 510.0 337 73.6
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 1.4e-142 510.0 335 75.5
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 2.4e-142 509.2 339 74.0
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 2.4e-142 509.2 334 73.4
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 6.0e-141 504.6 329 73.3
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 7.8e-141 504.2 322 73.3
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.3e-140 503.4 322 73.3
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 5.0e-140 501.5 341 71.0
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.5e-139 500.0 322 72.7
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 1.5e-139 500.0 339 72.0
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 5.6e-139 498.0 321 74.8
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 7.5e-136 487.6 320 72.8
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 1.9e-134 483.0 327 71.6
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 2.7e-133 479.2 309 74.1
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 7.8e-133 477.6 324 70.4
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 6.6e-132 474.6 335 68.1
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 6.6e-132 474.6 335 68.1
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 6.6e-132 474.6 328 69.2
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 2.5e-131 472.6 308 74.0
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 3.3e-131 472.2 317 70.3
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 4.3e-131 471.9 335 67.8
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 4.3e-131 471.9 322 73.0
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 5.6e-131 471.5 344 68.6
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 2.1e-130 469.5 313 73.2
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 3.6e-130 468.8 336 69.0
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 8.1e-130 467.6 318 70.8
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 8.1e-130 467.6 325 68.9
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 1.8e-129 466.5 342 65.8
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 1.2e-128 463.8 334 68.3
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 2.6e-128 462.6 315 70.8
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 3.4e-128 462.2 326 69.3
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 4.4e-128 461.8 341 69.8
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 2.9e-127 459.1 324 69.1
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 1.4e-126 456.8 312 69.6
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.4e-126 456.1 325 68.6
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 1.0e-124 450.7 337 65.6
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.3e-124 449.5 335 66.6
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.3e-124 449.5 335 66.6
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 8.6e-124 447.6 325 67.4
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 1.1e-123 447.2 339 65.8
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 4.3e-123 445.3 309 67.6
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.6e-122 443.4 311 67.8
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 1.8e-121 439.9 375 62.9
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 2.4e-121 439.5 312 67.3
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 5.2e-121 438.3 330 65.5
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 6.8e-121 438.0 317 67.2
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 8.9e-121 437.6 331 65.3
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 1.5e-120 436.8 310 69.0
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 2.0e-120 436.4 310 69.0
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 3.4e-120 435.6 305 68.5
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 7.6e-120 434.5 331 64.7
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 5.4e-118 428.3 345 64.6
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 1.5e-115 420.2 295 69.8
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 4.3e-115 418.7 305 67.9
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 2.0e-112 409.8 289 68.5
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 2.4e-110 402.9 323 65.9
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 1.2e-109 400.6 284 68.7
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 1.6e-109 400.2 344 60.2
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 3.5e-109 399.1 288 67.0
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 6.0e-109 398.3 248 78.2
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 1.1e-105 387.5 306 63.1
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 1.4e-105 387.1 271 68.6
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 8.4e-103 377.9 235 76.6
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 4.9e-95 352.1 224 77.2
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 9.0e-89 331.3 317 58.0
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 1.1e-86 324.3 297 51.9
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 4.3e-83 312.4 328 50.3
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.3e-82 310.8 325 50.8
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 8.2e-82 308.1 212 70.3
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 1.2e-80 304.3 299 50.5
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 5.9e-80 302.0 215 69.8
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.1e-77 293.5 314 51.6
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 2.7e-77 293.1 208 66.8
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 1.3e-66 257.7 207 61.8
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 2.4e-65 253.4 304 45.1
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 7.7e-64 248.4 355 38.6
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 3.5e-56 223.0 259 43.2
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 4.5e-56 222.6 170 64.7
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 3.4e-51 206.5 319 39.2
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 1.7e-47 194.1 199 52.3
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 7.8e-40 168.7 211 45.5
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 1.0e-39 168.3 116 69.0
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 5.6e-38 162.5 127 59.1
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 1.4e-36 157.9 88 86.4
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 1.8e-33 147.5 86 81.4
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 1.8e-33 147.5 102 71.6
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.1e-33 146.4 124 58.1
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 2.5e-30 137.1 376 29.0
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 9.5e-30 135.2 91 72.5
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 1.2e-27 128.3 100 62.0
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 7.0e-25 119.0 280 28.9
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 6.0e-24 115.9 131 47.3
Potri.017G115350 Populus trichocarpa HOM05D006950 ORTHO05D008798 3.4e-11 73.6 64 62.5
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 9.6e-06 55.5 30 66.7


User provided reference genes

Program Settings