Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33934 Davidia involucrata HOM05D003845 ORTHO05D004161 7.7e-162 574.3 427 100.0
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 2.9e-108 396.4 428 80.4
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 1.1e-70 271.6 426 61.3
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 7.4e-48 195.7 426 40.8
Lj2C445G6 Lonicera japonica HOM05D003845 ORTHO05D004161 1.4e-46 191.4 248 49.2
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 3.8e-44 183.3 227 49.3
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 2.5e-43 180.6 260 48.1
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 8.8e-41 172.2 254 48.0
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 1.1e-38 165.2 231 48.1
CiPaw.04G041000 Carya illinoinensis HOM05D003845 ORTHO05D004161 1.4e-38 164.9 267 43.1
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 1.8e-38 164.5 274 47.1
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 5.3e-38 162.9 275 46.5
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 1.2e-37 161.8 251 49.0
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 2.2e-36 157.5 273 45.4
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 2.3e-33 147.5 236 44.9
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 3.9e-33 146.7 232 48.3
Ciclev10010942m.g Citrus clementina HOM05D003845 ORTHO05D004161 1.7e-31 141.4 242 41.3
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 4.8e-31 139.8 247 45.3
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 1.4e-30 138.3 265 41.5
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 1.4e-30 138.3 190 46.8
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 1.4e-30 138.3 258 40.3
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 7.0e-30 136.0 249 39.4
DCAR_017205 Daucus carota HOM05D003845 ORTHO05D004161 1.2e-29 135.2 193 52.8
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 2.6e-29 134.0 235 41.3
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 3.5e-29 133.7 251 42.6
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 3.5e-29 133.7 239 40.6
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 1.3e-28 131.7 274 41.6
Ca_04077_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 2.2e-28 131.0 190 45.3
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 6.5e-28 129.4 269 40.9
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 1.1e-27 128.6 277 37.2
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 2.5e-27 127.5 248 39.5
Glyma.08G364200 Glycine max HOM05D003845 ORTHO05D004161 7.2e-27 125.9 235 39.1
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 7.2e-27 125.9 238 45.8
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 9.4e-27 125.6 240 44.6
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 1.2e-26 125.2 180 45.0
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 1.2e-26 125.2 268 39.9
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 1.2e-26 125.2 233 39.9
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 2.1e-26 124.4 241 39.0
Lj1g0022983 Lotus japonicus HOM05D003845 ORTHO05D004161 2.1e-26 124.4 241 39.0
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 2.7e-26 124.0 152 50.0
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 2.7e-26 124.0 152 50.0
Lj6g0007936 Lotus japonicus HOM05D003845 ORTHO05D004161 8.0e-26 122.5 233 40.8
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 8.0e-26 122.5 189 45.5
PSO782G1231 Papaver somniferum HOM05D003845 ORTHO05D004161 1.0e-25 122.1 233 42.9
ClCG11G005440 Citrullus lanatus HOM05D003845 ORTHO05D004161 3.0e-25 120.6 272 38.2
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 4.0e-25 120.2 148 52.7
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 4.0e-25 120.2 237 40.9
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 8.8e-25 119.0 254 40.9
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 1.5e-24 118.2 244 43.4
Cpa.g.sc179.5 Carica papaya HOM05D003845 ORTHO05D004161 2.6e-24 117.5 236 37.7
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 3.4e-24 117.1 218 38.1
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 4.4e-24 116.7 241 39.8
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 7.5e-24 115.9 225 40.9
Hund16135 Selenicereus undatus HOM05D003845 ORTHO05D004161 7.5e-24 115.9 213 38.0
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 1.3e-23 115.2 241 39.4
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 1.7e-23 114.8 273 35.5
Psat3g206280 Pisum sativum HOM05D003845 ORTHO05D004161 4.8e-23 113.2 240 40.4
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 6.3e-23 112.8 173 49.7
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 6.3e-23 112.8 125 53.6
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 8.3e-23 112.5 274 38.3
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 1.4e-22 111.7 266 38.0
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 2.4e-22 110.9 220 42.7
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 2.4e-22 110.9 274 39.4
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 1.2e-21 108.6 234 38.5
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 3.5e-21 107.1 244 40.6
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 3.5e-21 107.1 264 38.3
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 7.7e-21 105.9 236 37.3
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 7.7e-21 105.9 237 35.4
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 1.0e-20 105.5 275 36.0
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 1.0e-20 105.5 137 54.7
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 1.7e-20 104.8 262 37.0
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 1.7e-20 104.8 142 53.5
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 5.0e-20 103.2 251 38.2
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.9e-19 101.3 264 37.1
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 7.2e-19 99.4 233 36.9
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 9.4e-19 99.0 215 40.9
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 1.2e-18 98.6 69 72.5
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 1.2e-18 98.6 244 37.7
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 1.6e-18 98.2 272 33.8
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 4.7e-18 96.7 252 36.5
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 8.0e-18 95.9 187 39.0
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 1.0e-17 95.5 252 35.7
Gorai.001G080600 Gossypium raimondii HOM05D003845 ORTHO05D004161 1.4e-17 95.1 144 47.9
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 8.8e-17 92.4 256 34.0
RcHm_v2.0_Chr2g0166391 Rosa chinensis HOM05D003845 ORTHO05D004161 2.0e-13 81.3 69 62.3
unitig_899.g14511 Utricularia gibba HOM05D003845 ORTHO05D004161 1.7e-12 78.2 148 44.6
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 2.3e-12 77.8 270 30.0
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 2.1e-10 71.2 177 29.9
SEGI_32880 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 2.8e-10 70.9 149 35.6
PGSC0003DMG400012673 Solanum tuberosum HOM05D003845 ORTHO05D004161 3.6e-10 70.5 200 36.0
SEGI_31548 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 1.4e-09 68.6 133 36.8
Dinv08429 Davidia involucrata HOM05D003845 ORTHO05D004161 2.3e-09 67.8 51 64.7
BcaB03g15908 Brassica carinata HOM05D003845 ORTHO05D004161 1.2e-08 65.5 156 35.3
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 7.5e-08 62.8 148 36.5
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 9.8e-08 62.4 53 64.2
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 2.9e-07 60.8 187 27.8
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 1.1e-06 58.9 128 33.6
CDE02G2490 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 5.4e-06 56.6 148 33.8


User provided reference genes

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