Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 1.1e-130 469.9 235 100.0
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 8.7e-83 310.8 238 72.7
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 2.8e-81 305.8 239 69.0
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 1.4e-69 266.9 243 63.0
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 1.0e-67 260.8 241 65.6
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.0e-63 246.5 241 61.8
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 7.7e-63 244.6 238 58.8
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 6.5e-62 241.5 190 65.3
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 8.5e-62 241.1 238 57.1
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 7.2e-61 238.0 236 55.9
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 9.4e-61 237.7 190 64.2
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 1.2e-60 237.3 241 60.6
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 2.7e-60 236.1 236 55.5
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 2.7e-60 236.1 183 65.6
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 6.1e-60 235.0 236 55.9
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 6.1e-60 235.0 241 58.9
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.0e-59 234.2 239 58.6
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 1.0e-59 234.2 238 58.4
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 3.9e-59 232.3 229 58.1
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 5.1e-59 231.9 196 65.8
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 8.2e-57 224.6 238 55.5
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 1.4e-56 223.8 185 65.4
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 4.1e-56 222.2 241 54.4
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 6.9e-56 221.5 216 59.3
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 9.1e-56 221.1 237 55.7
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 2.2e-54 216.5 217 62.7
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 1.9e-53 213.4 238 55.9
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 5.5e-53 211.8 241 55.2
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 1.2e-52 210.7 228 56.6
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 3.6e-52 209.1 241 53.5
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 1.4e-51 207.2 185 60.5
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 1.8e-51 206.8 238 54.6
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 5.1e-51 205.3 226 55.3
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 3.3e-50 202.6 185 59.5
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 1.3e-49 200.7 191 57.6
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 6.3e-49 198.4 172 61.0
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 1.8e-48 196.8 231 52.8
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 5.3e-48 195.3 163 64.4
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 7.0e-48 194.9 213 57.3
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 1.6e-47 193.7 233 50.2
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 2.6e-47 193.0 238 52.5
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 7.7e-47 191.4 192 62.0
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 1.0e-46 191.0 195 56.9
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 1.0e-46 191.0 185 57.8
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 2.9e-46 189.5 236 52.1
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 9.4e-45 184.5 214 54.2
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 9.4e-45 184.5 235 49.4
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 1.2e-44 184.1 241 49.0
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 1.2e-44 184.1 280 46.1
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 2.7e-44 183.0 241 48.5
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 3.6e-44 182.6 240 52.1
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 1.4e-43 180.6 194 55.7
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 3.0e-43 179.5 240 51.7
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 5.2e-43 178.7 195 54.9
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 1.5e-42 177.2 195 54.4
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 2.2e-41 173.3 235 51.9
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 2.7e-39 166.4 238 48.7
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 3.5e-39 166.0 204 52.0
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 7.7e-39 164.9 137 67.2
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 2.2e-38 163.3 240 47.9
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 2.2e-38 163.3 225 50.2
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 2.2e-38 163.3 225 50.2
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 5.0e-38 162.2 190 50.5
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 8.5e-38 161.4 225 50.2
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 1.1e-37 161.0 254 44.5
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 9.4e-37 157.9 209 47.4
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 2.3e-35 153.3 246 45.5
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 6.8e-35 151.8 232 44.8
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 3.4e-34 149.4 239 43.9
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 2.4e-32 143.3 230 46.5
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 4.1e-32 142.5 247 45.7
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 1.2e-31 141.0 242 45.9
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 1.6e-31 140.6 238 46.2
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 5.9e-31 138.7 239 45.2
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 7.7e-31 138.3 259 43.2
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 7.7e-31 138.3 240 44.2
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 2.9e-30 136.3 236 44.5
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 1.1e-29 134.4 211 46.0
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 9.5e-29 131.3 251 43.4
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 1.6e-28 130.6 175 46.9
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 1.6e-28 130.6 218 42.7
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 1.4e-27 127.5 249 41.8
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 2.3e-27 126.7 253 41.1
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 6.8e-27 125.2 215 44.2
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 3.4e-26 122.9 233 43.3
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 9.8e-26 121.3 233 40.8
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 1.3e-25 120.9 224 41.5
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 1.3e-25 120.9 166 48.8
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 1.7e-25 120.6 172 50.0
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 2.2e-25 120.2 181 45.3
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 4.9e-25 119.0 230 40.4
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 4.9e-25 119.0 170 45.9
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 6.3e-25 118.6 185 45.9
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 9.2e-24 114.8 175 50.9
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 9.2e-24 114.8 175 50.9
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 7.7e-23 111.7 172 48.3
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 1.0e-22 111.3 172 47.1
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 1.7e-22 110.5 175 49.7
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 5.0e-22 109.0 175 49.1
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 5.0e-22 109.0 175 49.1
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 5.0e-22 109.0 190 41.1
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 6.6e-22 108.6 173 49.7
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 1.9e-21 107.1 237 39.2
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 2.5e-21 106.7 171 47.4
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 4.3e-21 105.9 176 46.6
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 7.3e-21 105.1 166 49.4
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 2.1e-20 103.6 103 60.2
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 3.6e-20 102.8 198 41.4
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 3.6e-20 102.8 189 42.9
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 2.3e-19 100.1 177 43.5
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 3.0e-19 99.8 77 64.9
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 3.0e-19 99.8 188 44.7
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 4.4e-18 95.9 175 44.0
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.3e-17 94.4 171 45.0
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 1.7e-17 94.0 166 42.2
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 2.2e-17 93.6 172 43.0
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 1.1e-16 91.3 169 42.0
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 2.4e-16 90.1 163 41.7
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 5.4e-16 89.0 191 38.7
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 4.6e-15 85.9 153 39.2
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.0e-14 84.7 189 37.6
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 5.0e-14 82.4 167 37.7
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 5.0e-14 82.4 102 49.0
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 6.6e-14 82.0 74 55.4
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 1.5e-13 80.9 144 44.4
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 1.9e-13 80.5 144 43.8
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 7.3e-13 78.6 141 44.0
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 7.3e-13 78.6 94 48.9
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 1.2e-12 77.8 148 43.9
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 1.6e-12 77.4 153 43.1
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.6e-12 77.4 176 39.8
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 2.1e-12 77.0 152 43.4
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 2.1e-12 77.0 153 43.1
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 2.1e-12 77.0 152 43.4
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 4.7e-12 75.9 164 40.2
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.4e-11 74.3 186 36.0
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 1.2e-10 71.2 157 37.6


User provided reference genes

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