Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33884 Davidia involucrata HOM05D008138 ORTHO05D010043 1.4e-110 402.9 198 100.0
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 1.7e-23 113.6 94 58.5
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 5.0e-23 112.1 102 52.9
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 1.0e-20 104.4 121 47.1
Haze_14354 Corylus avellana HOM05D008138 ORTHO05D010043 2.8e-18 96.3 96 45.8
Cfa007720 Carpinus fangiana HOM05D008138 ORTHO05D010043 6.3e-18 95.1 96 42.7
Nn3g17585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 4.1e-17 92.4 101 46.5
CSS0029791 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.6e-16 90.5 95 44.2
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.0e-16 90.1 95 43.2
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 7.7e-16 88.2 87 50.6
Nn1g02864 Nelumbo nucifera HOM05D008138 ORTHO05D010043 1.5e-14 84.0 91 44.0
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 8.0e-13 78.2 95 42.1
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 2.3e-12 76.6 95 42.1
Ciclev10033630m.g Citrus clementina HOM05D008138 ORTHO05D010043 5.2e-12 75.5 94 41.5
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 5.2e-12 75.5 95 41.1
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 1.2e-11 74.3 92 38.0
Dinv16583 Davidia involucrata HOM05D008138 ORTHO05D010043 3.4e-11 72.8 74 50.0
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 4.4e-11 72.4 94 38.3
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 1.3e-10 70.9 88 42.0
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 1.7e-10 70.5 93 35.5
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 2.2e-10 70.1 88 39.8
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 8.3e-10 68.2 93 36.6
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 8.3e-10 68.2 88 34.1
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 1.4e-09 67.4 86 36.0
Sabra13G0105400 Salix brachista HOM05D008138 ORTHO05D010043 2.4e-09 66.6 94 34.0
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 3.1e-09 66.2 87 37.9
MSTRG.19633 Avicennia marina HOM05D008138 ORTHO05D010043 4.1e-09 65.9 91 38.5
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 9.2e-09 64.7 83 37.3
QL08p042110 Quercus lobata HOM05D008138 ORTHO05D010043 2.0e-08 63.5 78 38.5
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 5.9e-08 62.0 73 39.7
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 7.7e-08 61.6 84 34.5
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 1.0e-07 61.2 125 30.4
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 1.0e-07 61.2 88 37.5
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 1.3e-07 60.8 116 31.0
Sopen01g005610 Solanum pennellii HOM05D056881 ORTHO05D010043 3.8e-07 59.3 75 36.0
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.0e-07 58.9 97 34.0
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.1e-06 57.8 97 33.0
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 1.5e-06 57.4 71 35.2
Solyc01g010060.2 Solanum lycopersicum HOM05D056881 ORTHO05D010043 1.5e-06 57.4 80 36.2
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.5e-06 56.6 91 33.0
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.5e-06 56.6 91 35.2
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.5e-06 56.6 97 34.0
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.6e-06 55.5 91 34.1
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 7.3e-06 55.1 97 32.0
FAN14G3748 Fragaria x ananassa HOM05D041812 ORTHO05D035860 7.3e-06 55.1 37 62.2
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 9.5e-06 54.7 97 30.9
Eucgr.B03099 Eucalyptus grandis HOM05D008138 ORTHO05D010043 9.5e-06 54.7 92 33.7
QL10p055293 Quercus lobata HOM05D008138 ORTHO05D010043 9.5e-06 54.7 84 31.0
QL10p055376 Quercus lobata HOM05D008138 ORTHO05D010043 9.5e-06 54.7 84 34.5


User provided reference genes

Program Settings