Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33864 Davidia involucrata HOM05D003991 ORTHO05D004883 1.2e-46 189.5 96 100.0
Hma1.2p1_1837F.1_g304750 Hydrangea macrophylla HOM05D003991 ORTHO05D004883 9.8e-25 116.7 116 60.3
Lj4A124G55 Lonicera japonica HOM05D003991 ORTHO05D004883 9.2e-23 110.2 108 60.2
vmacro18126 Vaccinium macrocarpon HOM05D003991 ORTHO05D004883 8.6e-21 103.6 118 51.7
Lsat_1_v5_gn_3_96860 Lactuca sativa HOM05D003991 ORTHO05D004883 1.9e-20 102.4 122 54.9
ClCG07G016050 Citrullus lanatus HOM05D003991 ORTHO05D004883 4.3e-20 101.3 114 52.6
Rhsim08G0077400 Rhododendron simsii HOM05D003991 ORTHO05D004883 4.3e-20 101.3 109 55.0
Cpa.g.sc541.1 Carica papaya HOM05D003991 ORTHO05D004883 2.1e-19 99.0 107 50.5
Nn4g23516 Nelumbo nucifera HOM05D003991 ORTHO05D004883 3.6e-19 98.2 103 53.4
Cc07_g04500 Coffea canephora HOM05D003991 ORTHO05D004883 4.7e-19 97.8 118 54.2
TAR374G0063 Trochodendron aralioides HOM05D003991 ORTHO05D004883 4.7e-19 97.8 107 52.3
TWI32G1311 Tripterygium wilfordii HOM05D003991 ORTHO05D004883 3.1e-18 95.1 108 50.9
CSS0001564 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 6.8e-18 94.0 101 55.4
Prupe.3G248800 Prunus persica HOM05D003991 ORTHO05D004883 1.5e-17 92.8 110 51.8
SalBow1G2342 Salvia bowleyana HOM05D003991 ORTHO05D004883 1.5e-17 92.8 109 50.5
SGA_v2.0_scaffold148G36448 Striga asiatica HOM05D003991 ORTHO05D004883 1.5e-17 92.8 113 49.6
Sabra17G0086400 Salix brachista HOM05D003991 ORTHO05D004883 4.4e-17 91.3 110 48.2
Haze_14380 Corylus avellana HOM05D003991 ORTHO05D004883 9.9e-17 90.1 114 48.2
PSO063G1675 Papaver somniferum HOM05D003991 ORTHO05D004883 1.3e-16 89.7 111 46.8
MSTRG.2973 Avicennia marina HOM05D003991 ORTHO05D004883 1.7e-16 89.4 113 47.8
CsaV3_4G010070 Cucumis sativus L. HOM05D003991 ORTHO05D004883 1.7e-16 89.4 115 47.0
PSO782G2666 Papaver somniferum HOM05D003991 ORTHO05D004883 1.7e-16 89.4 111 46.8
Sed0026923 Sechium edule HOM05D003991 ORTHO05D004883 1.7e-16 89.4 113 46.9
Migut.O00382 Erythranthe guttata HOM05D003991 ORTHO05D004883 2.9e-16 88.6 119 45.4
Potri.004G114600 Populus trichocarpa HOM05D003991 ORTHO05D004883 2.9e-16 88.6 114 49.1
Potri.017G100300 Populus trichocarpa HOM05D003991 ORTHO05D004883 2.9e-16 88.6 105 49.5
TAR622G0714 Trochodendron aralioides HOM05D003991 ORTHO05D004883 2.9e-16 88.6 107 47.7
TWI34G0665 Tripterygium wilfordii HOM05D003991 ORTHO05D004883 3.7e-16 88.2 114 47.4
AT5G38880 Arabidopsis thaliana HOM05D003991 ORTHO05D004883 4.9e-16 87.8 113 46.9
Atru.chr8.642 Acer truncatum HOM05D003991 ORTHO05D004883 8.3e-16 87.0 114 47.4
Lsat_1_v5_gn_2_90201 Lactuca sativa HOM05D003991 ORTHO05D004883 8.3e-16 87.0 109 53.2
Manes.01G103600 Manihot esculenta HOM05D003991 ORTHO05D004883 8.3e-16 87.0 109 46.8
Ciclev10011098m.g Citrus clementina HOM05D003991 ORTHO05D004883 1.1e-15 86.7 108 48.1
MBI17_g07944_MAGBIO Magnolia biondii HOM05D003991 ORTHO05D004883 1.1e-15 86.7 109 47.7
RcHm_v2.0_Chr2g0164851 Rosa chinensis HOM05D003991 ORTHO05D004883 1.1e-15 86.7 109 49.5
DCAR_011017 Daucus carota HOM05D003991 ORTHO05D004883 1.4e-15 86.3 107 53.3
MELO3C026296.2 Cucumis melo HOM05D003991 ORTHO05D004883 3.2e-15 85.1 121 45.5
CANSAT64G1645 Cannabis sativa HOM05D003991 ORTHO05D004883 4.1e-15 84.7 122 47.5
Carub.0007s3697 Capsella rubella HOM05D003991 ORTHO05D004883 4.1e-15 84.7 116 45.7
AL7G51550 Arabidopsis lyrata HOM05D003991 ORTHO05D004883 7.1e-15 84.0 113 44.2
CAN.G427.3 Capsicum annuum HOM05D003991 ORTHO05D004883 7.1e-15 84.0 101 49.5
Nitab4.5_0000154g0150 Nicotiana tabacum HOM05D003991 ORTHO05D004883 7.1e-15 84.0 103 47.6
Nitab4.5_0001434g0090 Nicotiana tabacum HOM05D003991 ORTHO05D004883 7.1e-15 84.0 103 47.6
Sc11g0008820 Simmondsia chinensis HOM05D003991 ORTHO05D004883 9.2e-15 83.6 114 47.4
unitig_748.g8415 Utricularia gibba HOM05D003991 ORTHO05D004883 9.2e-15 83.6 109 47.7
BcaC06g33715 Brassica carinata HOM05D003991 ORTHO05D004883 1.2e-14 83.2 100 47.0
C07p38530 Brassica napus HOM05D003991 ORTHO05D004883 1.2e-14 83.2 100 47.0
BolC7t44375H Brassica oleracea HOM05D003991 ORTHO05D004883 1.2e-14 83.2 100 47.0
CSS0050035 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 1.2e-14 83.2 123 48.0
HanXRQChr02g0043871 Helianthus annuus HOM05D003991 ORTHO05D004883 1.2e-14 83.2 105 49.5
Solyc03g046590.3 Solanum lycopersicum HOM05D003991 ORTHO05D004883 1.2e-14 83.2 101 47.5
Sopen03g010790 Solanum pennellii HOM05D003991 ORTHO05D004883 1.2e-14 83.2 101 47.5
Aa31LG2G3750 Aethionema arabicum HOM05D003991 ORTHO05D004883 2.1e-14 82.4 113 44.2
arahy.Tifrunner.gnm1.ann1.YA99EJ Arachis hypogaea HOM05D003991 ORTHO05D004883 2.1e-14 82.4 111 46.8
Manes.02G059600 Manihot esculenta HOM05D003991 ORTHO05D004883 2.1e-14 82.4 109 47.7
EL10Ac2g04440 Beta vulgaris HOM05D003991 ORTHO05D004883 4.6e-14 81.3 86 54.7
Cfa007697 Carpinus fangiana HOM05D003991 ORTHO05D004883 4.6e-14 81.3 82 53.7
FAN02G3988 Fragaria x ananassa HOM05D003991 ORTHO05D004883 4.6e-14 81.3 106 50.9
CiPaw.04G052100 Carya illinoinensis HOM05D003991 ORTHO05D004883 7.8e-14 80.5 71 59.2
FAN09G2010 Fragaria x ananassa HOM05D003991 ORTHO05D004883 7.8e-14 80.5 106 50.0
HanXRQChr07g0200011 Helianthus annuus HOM05D003991 ORTHO05D004883 7.8e-14 80.5 101 48.5
VMungo1383G3466 Vigna mungo HOM05D003991 ORTHO05D004883 7.8e-14 80.5 114 45.6
Sp2g18130 Schrenkiella parvula HOM05D003991 ORTHO05D004883 1.0e-13 80.1 110 43.6
CARHR263670 Cardamine hirsuta HOM05D003991 ORTHO05D004883 1.3e-13 79.7 114 45.6
MD17G1065900 Malus domestica HOM05D003991 ORTHO05D004883 1.3e-13 79.7 111 46.8
Phvul.008G026400 Phaseolus vulgaris HOM05D003991 ORTHO05D004883 1.3e-13 79.7 109 45.0
Thhalv10003675m.g Eutrema salsugineum HOM05D003991 ORTHO05D004883 1.7e-13 79.3 109 44.0
FAN05G5440 Fragaria x ananassa HOM05D003991 ORTHO05D004883 1.7e-13 79.3 106 50.0
BcaC06g30850 Brassica carinata HOM05D003991 ORTHO05D004883 2.3e-13 79.0 100 45.0
FvH4_6g46350 Fragaria vesca HOM05D003991 ORTHO05D004883 2.3e-13 79.0 106 50.0
PGR004G0075 Punica granatum HOM05D003991 ORTHO05D004883 2.3e-13 79.0 100 45.0
Eucgr.I02064 Eucalyptus grandis HOM05D003991 ORTHO05D004883 3.0e-13 78.6 103 45.6
FAN14G3680 Fragaria x ananassa HOM05D003991 ORTHO05D004883 5.1e-13 77.8 106 49.1
Glyma.18G274100 Glycine max HOM05D003991 ORTHO05D004883 6.6e-13 77.4 111 45.0
THA.LOC104822745 Tarenaya hassleriana HOM05D003991 ORTHO05D004883 8.6e-13 77.0 116 45.7
C09p04400 Brassica napus HOM05D003991 ORTHO05D004883 1.1e-12 76.6 107 45.8
BolC9t53370H Brassica oleracea HOM05D003991 ORTHO05D004883 1.1e-12 76.6 107 45.8
Thhalv10027646m.g Eutrema salsugineum HOM05D003991 ORTHO05D004883 1.5e-12 76.3 114 44.7
Lj1g0022443 Lotus japonicus HOM05D003991 ORTHO05D004883 1.9e-12 75.9 117 44.4
A06p39740 Brassica napus HOM05D003991 ORTHO05D004883 3.3e-12 75.1 100 44.0
BraA06t26889Z Brassica rapa HOM05D003991 ORTHO05D004883 3.3e-12 75.1 100 44.0
Glyma.08G251400 Glycine max HOM05D003991 ORTHO05D004883 3.3e-12 75.1 104 46.2
SEGI_18103 Sequoiadendron giganteum HOM05D003991 ORTHO05D004883 3.3e-12 75.1 109 43.1
TPR.G23393 Trifolium pratense HOM05D003991 ORTHO05D004883 3.3e-12 75.1 123 41.5
arahy.Tifrunner.gnm1.ann1.T6I3L8 Arachis hypogaea HOM05D003991 ORTHO05D004883 5.6e-12 74.3 107 43.0
BcaC04g23813 Brassica carinata HOM05D003991 ORTHO05D004883 5.6e-12 74.3 106 44.3
BcaC04g23819 Brassica carinata HOM05D003991 ORTHO05D004883 5.6e-12 74.3 106 44.3
BcaC04g23820 Brassica carinata HOM05D003991 ORTHO05D004883 5.6e-12 74.3 106 44.3
Psat3g203280 Pisum sativum HOM05D003991 ORTHO05D004883 5.6e-12 74.3 108 45.4
COL.COLO4_10252 Corchorus olitorius HOM05D003991 ORTHO05D004883 7.3e-12 73.9 82 48.8
Lalb_Chr10g0092711 Lupinus albus HOM05D003991 ORTHO05D004883 7.3e-12 73.9 81 50.6
CDE06G2000 Ceratophyllum demersum HOM05D003991 ORTHO05D004883 9.6e-12 73.6 95 46.3
Peaxi162Scf01002g00121 Petunia axillaris HOM05D003991 ORTHO05D004883 1.2e-11 73.2 110 38.2
MD09G1074500 Malus domestica HOM05D003991 ORTHO05D004883 1.6e-11 72.8 110 42.7
Aa31LG1G6630 Aethionema arabicum HOM05D003991 ORTHO05D004883 2.1e-11 72.4 115 43.5
BraA09t36055Z Brassica rapa HOM05D003991 ORTHO05D004883 4.7e-11 71.2 107 43.0
Duzib138G0045 Durio zibethinus HOM05D003991 ORTHO05D004883 4.7e-11 71.2 77 50.6
ATR0605G126 Amborella trichopoda HOM05D003991 ORTHO05D004883 8.1e-11 70.5 112 42.0
ECA246G2054 Erigeron canadensis HOM05D003991 ORTHO05D004883 8.1e-11 70.5 91 49.5
A09p04180 Brassica napus HOM05D003991 ORTHO05D004883 1.4e-10 69.7 108 43.5
Duzib133G0226 Durio zibethinus HOM05D003991 ORTHO05D004883 1.4e-10 69.7 76 48.7
Hund13674 Selenicereus undatus HOM05D003991 ORTHO05D004883 1.8e-10 69.3 79 49.4
Aqoxy3G03722 Aquilegia oxysepala HOM05D003991 ORTHO05D004883 2.4e-10 68.9 89 44.9
Medtr7g016900 Medicago truncatula HOM05D003991 ORTHO05D004883 3.1e-10 68.6 117 41.0
Gorai.001G207000 Gossypium raimondii HOM05D003991 ORTHO05D004883 4.0e-10 68.2 101 42.6
Ca_06908_v3 Cicer arietinum L. HOM05D003991 ORTHO05D004883 5.2e-10 67.8 125 39.2
ECA238G0416 Erigeron canadensis HOM05D003991 ORTHO05D004883 6.8e-10 67.4 101 44.6
CiPaw.03G082800 Carya illinoinensis HOM05D003991 ORTHO05D004883 2.0e-09 65.9 87 48.3
SMO147G0301 Selaginella moellendorffii HOM05D003991 ORTHO05D004883 5.8e-09 64.3 108 35.2
Mapoly0016s0130 Marchantia polymorpha HOM05D003991 ORTHO05D004883 1.7e-08 62.8 103 36.9
BcaC04g23826 Brassica carinata HOM05D003991 ORTHO05D004883 1.4e-07 59.7 75 48.0
Zm00001eb099080 Zea mays HOM05D003991 ORTHO05D004883 1.9e-07 59.3 101 37.6
Cfa020174 Carpinus fangiana HOM05D003991 ORTHO05D004883 4.2e-07 58.2 48 58.3
HPP92_025879 Vanilla planifolia HOM05D003991 ORTHO05D004883 4.2e-07 58.2 96 37.5
Ah.16g101030 Amaranthus hybridus HOM05D003991 ORTHO05D004883 5.4e-07 57.8 56 51.8
Pp3c9_9760 Physcomitrium patens HOM05D003991 ORTHO05D004883 5.4e-07 57.8 66 47.0
Pp3c9_9870 Physcomitrium patens HOM05D003991 ORTHO05D004883 5.4e-07 57.8 66 47.0
AagrBONN_evm.TU.Sc2ySwM_344.1887 Anthoceros agrestis HOM05D003991 ORTHO05D004883 7.1e-07 57.4 115 40.0
Pp3c15_7610 Physcomitrium patens HOM05D003991 ORTHO05D004883 2.1e-06 55.8 69 47.8


User provided reference genes

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