Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33862 Davidia involucrata HOM05D004605 ORTHO05D005804 2.9e-96 355.1 169 100.0
Hma1.2p1_0474F.1_g160750 Hydrangea macrophylla HOM05D004605 ORTHO05D005804 2.6e-65 252.3 159 77.4
GSVIVG01036547001 Vitis vinifera HOM05D004605 ORTHO05D005804 7.2e-63 244.2 145 75.9
Actinidia26268 Actinidia chinensis HOM05D004605 ORTHO05D005804 1.2e-62 243.4 146 74.7
Atru.chr8.648 Acer truncatum HOM05D004605 ORTHO05D005804 1.6e-62 243.0 140 78.6
Ciclev10012619m.g Citrus clementina HOM05D004605 ORTHO05D005804 1.6e-62 243.0 152 73.0
Rhsim08G0077200 Rhododendron simsii HOM05D004605 ORTHO05D005804 8.0e-62 240.7 140 80.0
TAR629G2115 Trochodendron aralioides HOM05D004605 ORTHO05D005804 8.0e-62 240.7 140 78.6
vmacro18128 Vaccinium macrocarpon HOM05D004605 ORTHO05D005804 8.0e-62 240.7 142 77.5
Thecc.04G106100 Theobroma cacao HOM05D004605 ORTHO05D005804 3.9e-61 238.4 151 71.5
Potri.017G100000 Populus trichocarpa HOM05D004605 ORTHO05D005804 5.2e-61 238.0 136 78.7
Lju361C6G5 Lonicera japonica HOM05D004605 ORTHO05D005804 2.0e-60 236.1 131 80.9
Sabra17G0086200 Salix brachista HOM05D004605 ORTHO05D005804 4.4e-60 235.0 139 75.5
Cpa.g.sc14.228 Carica papaya HOM05D004605 ORTHO05D005804 5.7e-60 234.6 145 73.1
Duzib133G0947 Durio zibethinus HOM05D004605 ORTHO05D005804 1.1e-58 230.3 158 67.7
QL02p065873 Quercus lobata HOM05D004605 ORTHO05D005804 1.8e-58 229.6 151 72.2
Cc07_g04470 Coffea canephora HOM05D004605 ORTHO05D005804 3.1e-58 228.8 143 69.9
COL.COLO4_10258 Corchorus olitorius HOM05D004605 ORTHO05D005804 3.1e-58 228.8 131 75.6
Peaxi162Scf00020g10235 Petunia axillaris HOM05D004605 ORTHO05D005804 3.1e-58 228.8 133 76.7
TWI60G1007 Tripterygium wilfordii HOM05D004605 ORTHO05D005804 4.1e-58 228.4 152 71.7
Manes.02G059400 Manihot esculenta HOM05D004605 ORTHO05D005804 1.2e-57 226.9 131 75.6
Oeu031839.1 Olea europaea HOM05D004605 ORTHO05D005804 1.6e-57 226.5 140 74.3
Gohir.D07G186600 Gossypium hirsutum HOM05D004605 ORTHO05D005804 2.0e-57 226.1 151 67.5
Gorai.001G207200 Gossypium raimondii HOM05D004605 ORTHO05D005804 2.0e-57 226.1 151 67.5
Gohir.A07G179800 Gossypium hirsutum HOM05D004605 ORTHO05D005804 2.6e-57 225.7 151 66.9
Medtr7g016650 Medicago truncatula HOM05D004605 ORTHO05D005804 4.5e-57 224.9 141 71.6
ClCG07G016040 Citrullus lanatus HOM05D004605 ORTHO05D005804 7.7e-57 224.2 152 69.1
Manes.01G103400 Manihot esculenta HOM05D004605 ORTHO05D005804 7.7e-57 224.2 131 74.0
Cfa007695 Carpinus fangiana HOM05D004605 ORTHO05D005804 1.0e-56 223.8 141 73.0
Hund16233 Selenicereus undatus HOM05D004605 ORTHO05D005804 1.0e-56 223.8 133 78.2
CSS0024904 Camellia sinensis var. sinensis HOM05D004605 ORTHO05D005804 2.2e-56 222.6 141 72.3
Solyc02g089230.3 Solanum lycopersicum HOM05D004605 ORTHO05D005804 5.0e-56 221.5 134 71.6
Haze_14382 Corylus avellana HOM05D004605 ORTHO05D005804 1.1e-55 220.3 141 72.3
HanXRQChr14g0452481 Helianthus annuus HOM05D004605 ORTHO05D005804 1.1e-55 220.3 145 69.0
PGSC0003DMG400001379 Solanum tuberosum HOM05D004605 ORTHO05D005804 1.1e-55 220.3 127 75.6
Sopen02g034020 Solanum pennellii HOM05D004605 ORTHO05D005804 1.9e-55 219.5 127 74.8
QL02p053766 Quercus lobata HOM05D004605 ORTHO05D005804 2.5e-55 219.2 130 73.8
Nitab4.5_0001339g0150 Nicotiana tabacum HOM05D004605 ORTHO05D005804 3.2e-55 218.8 133 72.9
CAN.G497.71 Capsicum annuum HOM05D004605 ORTHO05D005804 4.2e-55 218.4 127 74.8
Nitab4.5_0007530g0010 Nicotiana tabacum HOM05D004605 ORTHO05D005804 4.2e-55 218.4 131 74.0
SGA_v2.0_scaffold148G36445 Striga asiatica HOM05D004605 ORTHO05D005804 5.5e-55 218.0 144 71.5
CsaV3_4G010080 Cucumis sativus L. HOM05D004605 ORTHO05D005804 7.2e-55 217.6 151 66.9
BraA07t29690Z Brassica rapa HOM05D004605 ORTHO05D005804 1.6e-54 216.5 140 70.7
BcaC08g44406 Brassica carinata HOM05D004605 ORTHO05D005804 2.1e-54 216.1 140 71.4
C06p18440 Brassica napus HOM05D004605 ORTHO05D005804 2.1e-54 216.1 140 71.4
BolC6t37056H Brassica oleracea HOM05D004605 ORTHO05D005804 2.1e-54 216.1 140 71.4
Sed0020846 Sechium edule HOM05D004605 ORTHO05D005804 2.1e-54 216.1 145 69.0
Carub.0007s3694 Capsella rubella HOM05D004605 ORTHO05D005804 2.7e-54 215.7 140 70.7
BcaB02g07994 Brassica carinata HOM05D004605 ORTHO05D005804 3.6e-54 215.3 140 70.0
A07p19860 Brassica napus HOM05D004605 ORTHO05D005804 4.7e-54 214.9 140 70.0
Aqoxy3G03715 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 6.1e-54 214.5 145 69.0
Duzib138G1714 Durio zibethinus HOM05D004605 ORTHO05D005804 6.1e-54 214.5 142 69.7
AUR62024435 Chenopodium quinoa HOM05D004605 ORTHO05D005804 1.4e-53 213.4 130 71.5
CANSAT64G2231 Cannabis sativa HOM05D004605 ORTHO05D005804 3.0e-53 212.2 132 72.7
arahy.Tifrunner.gnm1.ann1.90K79T Arachis hypogaea HOM05D004605 ORTHO05D005804 6.7e-53 211.1 140 67.9
arahy.Tifrunner.gnm1.ann1.M6S7AL Arachis hypogaea HOM05D004605 ORTHO05D005804 6.7e-53 211.1 140 67.9
Lalb_Chr10g0092731 Lupinus albus HOM05D004605 ORTHO05D005804 1.2e-52 210.3 140 67.9
PSO675G6317 Papaver somniferum HOM05D004605 ORTHO05D005804 1.2e-52 210.3 127 74.0
Psat3g203400 Pisum sativum HOM05D004605 ORTHO05D005804 1.5e-52 209.9 140 67.9
Sp7g03000 Schrenkiella parvula HOM05D004605 ORTHO05D005804 1.5e-52 209.9 159 61.0
PSO732G0027 Papaver somniferum HOM05D004605 ORTHO05D005804 2.0e-52 209.5 127 73.2
Sc10g0000600 Simmondsia chinensis HOM05D004605 ORTHO05D005804 2.0e-52 209.5 140 66.4
Aa31LG9G16810 Aethionema arabicum HOM05D004605 ORTHO05D005804 2.6e-52 209.1 140 70.7
AL7G51520 Arabidopsis lyrata HOM05D004605 ORTHO05D005804 3.3e-52 208.8 140 66.4
MELO3C026298.2 Cucumis melo HOM05D004605 ORTHO05D005804 3.3e-52 208.8 141 69.5
ECA238G2860 Erigeron canadensis HOM05D004605 ORTHO05D005804 3.3e-52 208.8 137 68.6
Glyma.08G251200 Glycine max HOM05D004605 ORTHO05D005804 3.3e-52 208.8 136 70.6
Thhalv10027927m.g Eutrema salsugineum HOM05D004605 ORTHO05D005804 4.4e-52 208.4 140 68.6
Glyma.18G273900 Glycine max HOM05D004605 ORTHO05D005804 7.5e-52 207.6 136 68.4
Lsat_1_v5_gn_2_90241 Lactuca sativa HOM05D004605 ORTHO05D005804 7.5e-52 207.6 140 67.1
DCAR_021425 Daucus carota HOM05D004605 ORTHO05D005804 9.7e-52 207.2 131 71.0
Migut.H00587 Erythranthe guttata HOM05D004605 ORTHO05D005804 9.7e-52 207.2 140 65.0
MBI16_g34534_MAGBIO Magnolia biondii HOM05D004605 ORTHO05D005804 9.7e-52 207.2 145 66.2
AT5G38900 Arabidopsis thaliana HOM05D004605 ORTHO05D005804 1.3e-51 206.8 140 66.4
CiPaw.03G083000 Carya illinoinensis HOM05D004605 ORTHO05D005804 4.8e-51 204.9 139 64.7
VMungo1383G2960 Vigna mungo HOM05D004605 ORTHO05D005804 4.8e-51 204.9 136 67.6
Phvul.008G027000 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 6.3e-51 204.5 136 66.2
EL10Ac2g04442 Beta vulgaris HOM05D004605 ORTHO05D005804 8.3e-51 204.1 140 65.7
Aqoxy3G03714 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.1e-50 203.8 145 63.4
MSTRG.15437 Avicennia marina HOM05D004605 ORTHO05D005804 1.8e-50 203.0 128 72.7
Phvul.008G026800 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 3.1e-50 202.2 136 66.2
THA.LOC104805526 Tarenaya hassleriana HOM05D004605 ORTHO05D005804 4.1e-50 201.8 124 69.4
TPR.G23408 Trifolium pratense HOM05D004605 ORTHO05D005804 5.3e-50 201.4 131 67.9
MSTRG.15436 Avicennia marina HOM05D004605 ORTHO05D005804 7.0e-50 201.1 137 67.2
Lj1g0025970 Lotus japonicus HOM05D004605 ORTHO05D005804 7.0e-50 201.1 130 69.2
Phvul.008G027600 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 7.0e-50 201.1 127 69.3
SalBow1G3999 Salvia bowleyana HOM05D004605 ORTHO05D005804 9.1e-50 200.7 129 69.8
CARHR263630 Cardamine hirsuta HOM05D004605 ORTHO05D005804 2.0e-49 199.5 130 67.7
VMungo1383G3490 Vigna mungo HOM05D004605 ORTHO05D005804 5.9e-49 198.0 139 62.6
Aqoxy3G03716 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.0e-48 197.2 145 64.1
Ca_06902_v3 Cicer arietinum L. HOM05D004605 ORTHO05D005804 1.3e-48 196.8 131 67.2
CiPaw.03G083100 Carya illinoinensis HOM05D004605 ORTHO05D005804 1.7e-48 196.4 140 64.3
Prupe.3G249100 Prunus persica HOM05D004605 ORTHO05D005804 3.8e-48 195.3 125 70.4
Eucgr.I02062 Eucalyptus grandis HOM05D004605 ORTHO05D005804 6.5e-48 194.5 162 59.3
MD17G1065700 Malus domestica HOM05D004605 ORTHO05D005804 1.5e-47 193.4 146 61.6
Zm00001eb219300 Zea mays HOM05D004605 ORTHO05D005804 1.9e-47 193.0 131 64.1
Os03g0598900 Oryza sativa ssp. japonica HOM05D004605 ORTHO05D005804 2.5e-47 192.6 137 62.0
FvH4_6g46390 Fragaria vesca HOM05D004605 ORTHO05D005804 1.2e-46 190.3 122 71.3
FAN02G3403 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.2e-46 190.3 122 71.3
FAN14G2038 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.2e-46 190.3 122 71.3
HPP92_012260 Vanilla planifolia HOM05D004605 ORTHO05D005804 1.2e-46 190.3 141 62.4
Zm00001eb049940 Zea mays HOM05D004605 ORTHO05D005804 6.1e-46 188.0 128 64.8
MD09G1074300 Malus domestica HOM05D004605 ORTHO05D005804 8.0e-46 187.6 122 68.0
FAN05G4053 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.4e-45 186.8 133 65.4
RcHm_v2.0_Chr2g0164921 Rosa chinensis HOM05D004605 ORTHO05D005804 1.2e-44 183.7 129 64.3
ATR0827G055 Amborella trichopoda HOM05D004605 ORTHO05D005804 4.4e-44 181.8 134 60.4
AUR62023160 Chenopodium quinoa HOM05D004605 ORTHO05D005804 5.7e-44 181.4 130 64.6
Eucgr.L00305 Eucalyptus grandis HOM05D004605 ORTHO05D005804 9.8e-44 180.6 112 71.4
SMO223G0030 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 1.6e-41 173.3 122 63.1
Mapoly0001s0057 Marchantia polymorpha HOM05D004605 ORTHO05D005804 7.7e-41 171.0 122 61.5
arahy.Tifrunner.gnm1.ann1.XASR8W Arachis hypogaea HOM05D004605 ORTHO05D005804 3.6e-38 162.2 140 55.0
Prupe.3G249000 Prunus persica HOM05D004605 ORTHO05D005804 1.4e-37 160.2 124 55.6
AagrBONN_evm.TU.Sc2ySwM_340.409 Anthoceros agrestis HOM05D004605 ORTHO05D005804 6.8e-37 157.9 123 52.8
Pp3c14_20450 Physcomitrium patens HOM05D004605 ORTHO05D005804 2.6e-36 156.0 122 56.6
SEGI_21234 Sequoiadendron giganteum HOM05D004605 ORTHO05D005804 9.8e-36 154.1 148 47.3
AUR62009481 Chenopodium quinoa HOM05D004605 ORTHO05D005804 3.7e-35 152.1 84 78.6
Eucgr.B03744 Eucalyptus grandis HOM05D004605 ORTHO05D005804 7.8e-33 144.4 112 60.7
PSO591G0315 Papaver somniferum HOM05D004605 ORTHO05D005804 2.5e-31 139.4 86 69.8
Eucgr.L00721 Eucalyptus grandis HOM05D004605 ORTHO05D005804 4.3e-31 138.7 112 60.7
RcHm_v2.0_Chr2g0164911 Rosa chinensis HOM05D004605 ORTHO05D005804 8.0e-30 134.4 126 48.4
FvH4_6g46370 Fragaria vesca HOM05D004605 ORTHO05D005804 1.8e-29 133.3 126 48.4
Cre12.g553700 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D005804 3.1e-29 132.5 122 50.0
FAN09G3310 Fragaria x ananassa HOM05D004605 ORTHO05D005804 5.2e-29 131.7 126 47.6
FAN05G1095 Fragaria x ananassa HOM05D004605 ORTHO05D005804 6.8e-29 131.3 121 48.8
FAN02G1482 Fragaria x ananassa HOM05D004605 ORTHO05D005804 4.4e-28 128.6 126 47.6
FAN09G1153 Fragaria x ananassa HOM05D004605 ORTHO05D005804 9.8e-28 127.5 122 54.9
QL02p036101 Quercus lobata HOM05D004605 ORTHO05D005804 6.6e-24 114.8 128 47.7
QL10p051328 Quercus lobata HOM05D004605 ORTHO05D005804 5.6e-23 111.7 128 46.1
QL10p049039 Quercus lobata HOM05D004605 ORTHO05D005804 1.2e-22 110.5 116 49.1
BolC3t14639H Brassica oleracea HOM05D004605 ORTHO05D005804 1.4e-21 107.1 68 69.1
AagrBONN_evm.TU.Sc2ySwM_340.410 Anthoceros agrestis HOM05D004605 ORTHO05D005804 5.2e-21 105.1 87 54.0
SalBow3G1842 Salvia bowleyana HOM05D004605 ORTHO05D005804 2.0e-20 103.2 115 49.6
Cfa025436 Carpinus fangiana HOM05D004605 ORTHO05D005804 9.8e-20 100.9 125 38.4
Nn1g08577 Nelumbo nucifera HOM05D004605 ORTHO05D005804 4.9e-19 98.6 66 66.7
Nn1g08580 Nelumbo nucifera HOM05D004605 ORTHO05D005804 1.6e-17 93.6 60 71.7
HPP92_012204 Vanilla planifolia HOM05D004605 ORTHO05D005804 1.2e-14 84.0 69 59.4
Pp3s30_530 Physcomitrium patens HOM05D004605 ORTHO05D005804 6.2e-14 81.6 133 37.6
MCO08G262 Micromonas commoda HOM05D004605 ORTHO05D005804 2.2e-11 73.2 143 32.2
CBR_g36839 Chara braunii HOM05D004605 ORTHO05D005804 4.9e-11 72.0 122 29.5
Nn1g08579 Nelumbo nucifera HOM05D004605 ORTHO05D005804 8.3e-11 71.2 58 53.4
Mapoly0107s0018 Marchantia polymorpha HOM05D004605 ORTHO05D005804 1.7e-08 63.5 111 33.3
SMO270G0021 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 9.5e-07 57.8 68 36.8
Cre12.g553650 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D143570 1.6e-06 57.0 77 33.8


User provided reference genes

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