Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 6.2e-88 327.4 163 100.0
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 2.6e-57 225.7 158 69.6
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 5.9e-54 214.5 156 66.7
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 8.5e-53 210.7 154 68.2
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 9.4e-52 207.2 161 65.8
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 2.1e-51 206.1 155 65.8
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 6.1e-51 204.5 162 64.2
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 2.0e-49 199.5 159 61.6
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 4.4e-49 198.4 159 61.6
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 3.1e-47 192.2 151 60.9
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 4.1e-47 191.8 161 61.5
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 1.2e-46 190.3 150 63.3
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 2.0e-46 189.5 160 61.9
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 3.5e-46 188.7 160 60.6
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 4.5e-46 188.3 154 56.5
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 5.0e-45 184.9 154 59.1
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 1.5e-44 183.3 159 62.3
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 1.5e-44 183.3 162 61.7
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 1.5e-44 183.3 162 61.7
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 1.9e-44 183.0 161 57.1
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 1.9e-44 183.0 155 60.0
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 2.5e-44 182.6 156 59.0
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 3.2e-44 182.2 156 59.6
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 4.2e-44 181.8 164 57.3
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 5.5e-44 181.4 159 61.6
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 9.4e-44 180.6 161 60.9
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 2.1e-43 179.5 154 57.1
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 6.1e-43 177.9 152 59.9
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 6.8e-42 174.5 145 57.9
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 1.2e-41 173.7 161 55.9
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 1.5e-41 173.3 126 69.8
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 3.4e-41 172.2 154 55.8
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 7.5e-41 171.0 161 54.7
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 9.7e-41 170.6 155 53.5
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 9.7e-41 170.6 159 52.8
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 1.3e-40 170.2 155 55.5
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 2.2e-40 169.5 129 64.3
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 2.2e-40 169.5 126 68.3
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 2.2e-40 169.5 126 65.1
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 2.8e-40 169.1 160 58.8
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 2.8e-40 169.1 159 54.7
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 3.7e-40 168.7 142 60.6
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 3.7e-40 168.7 159 52.2
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 4.8e-40 168.3 110 66.4
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 6.3e-40 167.9 155 56.1
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 1.1e-39 167.2 155 54.2
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 2.4e-39 166.0 157 56.1
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 4.1e-39 165.2 161 54.0
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 9.1e-39 164.1 133 63.2
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 2.0e-38 162.9 144 56.9
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.7e-37 159.8 141 59.6
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 1.1e-36 157.1 137 59.1
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 1.5e-36 156.8 159 50.9
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 1.9e-36 156.4 95 77.9
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 4.2e-36 155.2 91 80.2
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 4.2e-36 155.2 155 51.0
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 4.2e-36 155.2 159 49.1
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 5.5e-36 154.8 93 79.6
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 5.5e-36 154.8 158 50.6
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 5.5e-36 154.8 91 79.1
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 5.5e-36 154.8 94 75.5
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 5.5e-36 154.8 94 75.5
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 5.5e-36 154.8 87 79.3
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 5.5e-36 154.8 87 79.3
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 7.2e-36 154.5 94 75.5
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 3.6e-35 152.1 160 48.1
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 8.0e-35 151.0 100 70.0
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 4.0e-34 148.7 157 50.3
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 4.0e-34 148.7 156 48.7
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 5.2e-34 148.3 160 50.0
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 6.8e-34 147.9 110 63.6
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 8.8e-34 147.5 162 50.6
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 1.2e-33 147.1 154 50.6
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 1.2e-33 147.1 159 48.4
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 2.0e-33 146.4 96 69.8
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 2.6e-33 146.0 90 76.7
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 3.4e-33 145.6 162 49.4
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 4.4e-33 145.2 159 49.7
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 4.4e-33 145.2 159 49.7
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 5.7e-33 144.8 81 81.5
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 5.7e-33 144.8 84 76.2
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 7.5e-33 144.4 100 66.0
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 2.2e-32 142.9 157 47.8
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 2.2e-32 142.9 157 47.8
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 6.3e-32 141.4 160 47.5
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 6.3e-32 141.4 120 59.2
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 3.1e-31 139.0 75 82.7
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 4.1e-31 138.7 107 62.6
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 2.0e-30 136.3 88 71.6
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 4.2e-28 128.6 108 56.5
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 1.2e-27 127.1 110 54.5
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 3.7e-24 115.5 79 64.6
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 5.4e-23 111.7 79 59.5
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 2.9e-21 105.9 75 65.3
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 5.0e-21 105.1 92 55.4
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 6.6e-21 104.8 77 57.1
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 1.1e-20 104.0 157 40.1
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 1.1e-20 104.0 157 40.1
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 1.8e-18 96.7 107 46.7
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 1.4e-15 87.0 60 65.0
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 1.1e-12 77.4 49 69.4


User provided reference genes

Program Settings