Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 5.3e-215 750.7 376 100.0
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 2.4e-167 592.4 412 75.7
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 9.4e-164 580.5 407 74.9
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.2e-163 580.1 399 76.2
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 2.7e-163 578.9 417 72.9
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 2.9e-157 558.9 395 74.2
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 3.8e-157 558.5 392 74.7
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 1.0e-154 550.4 358 78.5
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 4.0e-154 548.5 412 71.6
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 3.4e-153 545.4 348 79.9
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 5.0e-149 531.6 413 68.5
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 9.5e-148 527.3 408 66.2
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 1.4e-146 523.5 417 66.4
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 3.4e-145 518.8 409 66.5
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 4.9e-144 515.0 365 72.3
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 2.4e-143 512.7 414 66.9
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 2.4e-143 512.7 392 69.1
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 7.0e-143 511.1 416 66.1
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 1.6e-142 510.0 395 68.1
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 3.5e-142 508.8 395 66.6
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 1.7e-141 506.5 409 64.1
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 6.6e-141 504.6 407 65.6
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 6.6e-141 504.6 389 66.8
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 8.6e-141 504.2 407 64.9
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 9.5e-140 500.7 414 64.7
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 2.1e-139 499.6 394 64.7
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 3.6e-139 498.8 400 65.0
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 6.1e-139 498.0 409 65.8
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 1.2e-137 493.8 373 69.4
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 2.0e-137 493.0 399 64.7
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 2.0e-137 493.0 412 62.6
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 3.4e-137 492.3 386 65.5
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 7.5e-137 491.1 386 65.0
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 3.7e-136 488.8 387 65.9
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 6.4e-136 488.0 407 63.6
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 8.3e-136 487.6 363 68.6
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 1.9e-135 486.5 364 69.2
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 3.2e-135 485.7 386 63.7
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 7.0e-135 484.6 380 66.1
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 7.0e-135 484.6 393 64.9
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 9.2e-135 484.2 361 68.7
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 9.2e-135 484.2 407 63.9
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 7.8e-134 481.1 364 68.4
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 6.6e-133 478.0 377 65.8
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 1.1e-132 477.2 367 68.4
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 2.5e-132 476.1 352 67.9
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 2.8e-131 472.6 358 67.6
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 4.7e-131 471.9 407 63.6
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 1.8e-130 469.9 364 68.1
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 1.8e-130 469.9 411 60.6
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 6.8e-130 468.0 369 64.0
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 1.2e-129 467.2 470 54.0
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 2.0e-129 466.5 395 61.8
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 3.4e-129 465.7 408 61.0
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 5.8e-129 464.9 433 58.9
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 7.5e-129 464.5 410 60.0
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 1.3e-128 463.8 359 65.2
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 6.4e-128 461.5 343 71.1
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 1.1e-127 460.7 409 59.9
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 1.4e-127 460.3 331 71.3
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 1.4e-127 460.3 400 59.0
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 4.1e-127 458.8 433 58.2
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 4.1e-127 458.8 378 64.0
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 7.8e-126 454.5 358 68.2
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 1.0e-125 454.1 377 63.1
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 1.0e-125 454.1 364 64.8
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 2.3e-125 453.0 348 65.8
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 3.9e-125 452.2 359 62.4
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 5.1e-125 451.8 391 59.8
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 5.1e-125 451.8 370 60.8
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 8.6e-125 451.1 362 65.2
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 8.6e-125 451.1 431 57.5
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 1.1e-124 450.7 431 57.8
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 2.5e-124 449.5 370 60.8
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 2.5e-124 449.5 364 65.1
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 3.3e-124 449.1 380 59.5
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 9.5e-124 447.6 395 57.5
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 2.8e-123 446.0 379 58.8
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 2.8e-123 446.0 379 58.8
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 1.1e-122 444.1 361 62.0
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 3.1e-122 442.6 370 60.3
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 1.2e-121 440.7 357 62.2
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 1.7e-120 436.8 340 66.8
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 1.4e-119 433.7 408 59.3
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 1.6e-118 430.3 387 59.9
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 1.6e-118 430.3 411 58.6
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 8.6e-117 424.5 366 60.4
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 9.9e-113 411.0 353 59.8
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 1.3e-112 410.6 314 67.2
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 2.7e-110 402.9 307 68.1
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 6.0e-110 401.7 316 66.1
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 1.1e-106 391.0 240 77.5
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 2.5e-100 369.8 325 57.5
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 4.9e-96 355.5 349 52.4
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 9.3e-95 351.3 352 52.3
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 1.5e-89 334.0 261 60.9
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.7e-88 330.5 354 48.9
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 1.5e-84 317.4 289 56.7
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 6.3e-83 312.0 356 46.9
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 4.5e-73 279.3 415 45.8
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 3.9e-69 266.2 258 58.9
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 2.8e-67 260.0 335 44.2
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 1.0e-61 241.5 186 67.7
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 5.7e-60 235.7 367 40.3
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 7.0e-58 228.8 243 51.9
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 7.7e-57 225.3 408 36.0
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 7.7e-57 225.3 408 36.0
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.2e-54 218.0 408 33.6
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 2.7e-54 216.9 152 65.8
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 4.7e-54 216.1 185 62.7
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 1.6e-49 201.1 204 57.4
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 2.1e-46 190.7 174 56.9
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.6e-44 183.7 513 27.3
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 1.0e-40 171.8 341 35.8
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 6.5e-40 169.1 152 57.2
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 6.3e-35 152.5 362 35.1
Actinidia17537 Actinidia chinensis HOM05D006074 ORTHO05D026256 5.6e-23 112.8 68 80.9
Atru.chr3.96 Acer truncatum HOM05D006074 ORTHO05D026256 6.2e-22 109.4 70 77.1
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 2.2e-19 100.9 71 71.8
CDE02G1972 Ceratophyllum demersum HOM05D006074 ORTHO05D026256 4.9e-19 99.8 66 75.8
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 2.7e-17 94.0 61 68.9
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 1.4e-10 71.6 53 71.7
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 3.2e-10 70.5 168 32.1
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 9.2e-10 68.9 95 43.2
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 6.0e-09 66.2 178 28.1
QL02p001457 Quercus lobata HOM05D002735 ORTHO05D003048 3.0e-08 63.9 98 45.9
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 4.3e-07 60.1 169 26.6
SEGI_18941 Sequoiadendron giganteum HOM05D006074 ORTHO05D026256 3.6e-06 57.0 49 63.3


User provided reference genes

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