Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 5.9e-200 700.7 353 100.0
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 7.7e-168 594.0 352 82.7
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 7.7e-168 594.0 352 82.7
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 1.5e-166 589.7 351 82.1
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 1.9e-166 589.3 352 79.8
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 8.8e-164 580.5 350 80.6
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 2.8e-162 575.5 351 78.9
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 1.1e-161 573.5 349 79.7
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 5.6e-158 561.2 354 76.0
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 9.5e-158 560.5 352 78.7
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 7.5e-155 550.8 342 76.9
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 9.8e-155 550.4 342 77.2
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 1.3e-154 550.1 342 77.8
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 2.9e-154 548.9 354 74.9
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 6.4e-154 547.7 349 77.9
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 6.4e-154 547.7 342 76.9
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 8.3e-154 547.4 342 77.2
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 1.1e-153 547.0 342 77.5
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 1.1e-153 547.0 313 84.3
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 1.4e-153 546.6 348 75.0
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 2.4e-153 545.8 348 76.1
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 3.2e-153 545.4 342 74.6
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 4.1e-153 545.0 386 71.0
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 5.4e-153 544.7 351 74.1
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 5.4e-153 544.7 342 77.2
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 7.0e-153 544.3 353 74.8
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 9.2e-153 543.9 351 74.4
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 2.0e-152 542.7 352 73.9
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 4.6e-152 541.6 348 75.6
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 4.6e-152 541.6 348 76.1
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 1.0e-151 540.4 346 76.0
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 2.3e-151 539.3 369 74.0
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 3.9e-151 538.5 342 77.2
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 5.0e-151 538.1 347 75.2
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 1.5e-150 536.6 344 75.9
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 1.5e-150 536.6 347 73.5
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.9e-150 536.2 334 78.1
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 3.3e-150 535.4 344 75.6
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 5.6e-150 534.6 346 75.1
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 1.8e-148 529.6 350 73.4
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 2.3e-148 529.3 342 73.7
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 3.1e-148 528.9 344 72.4
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 1.2e-147 526.9 344 72.7
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 2.0e-147 526.2 345 72.5
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 5.8e-147 524.6 347 71.5
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 1.4e-145 520.0 361 69.8
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.5e-142 510.0 349 73.6
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 1.9e-142 509.6 351 70.1
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 3.6e-141 505.4 325 76.3
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 4.0e-140 501.9 353 71.4
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 6.8e-140 501.1 383 67.9
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 9.8e-139 497.3 342 72.5
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 6.4e-138 494.6 349 67.3
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 8.3e-138 494.2 349 68.5
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 5.4e-137 491.5 341 68.9
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 7.1e-137 491.1 354 65.0
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 7.8e-136 487.6 356 69.7
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 1.0e-135 487.3 398 64.3
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 1.7e-135 486.5 324 73.1
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 3.0e-135 485.7 341 68.3
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 3.0e-135 485.7 381 61.2
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 8.6e-135 484.2 341 68.9
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 8.6e-135 484.2 341 68.6
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 7.3e-134 481.1 408 61.5
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 7.3e-134 481.1 365 65.8
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 2.1e-133 479.6 350 68.3
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 4.7e-133 478.4 342 69.6
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 6.2e-133 478.0 348 69.5
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 8.1e-133 477.6 341 68.0
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 8.9e-132 474.2 361 65.1
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 1.2e-131 473.8 349 65.9
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 1.5e-131 473.4 366 66.7
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 1.5e-131 473.4 347 69.7
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 4.4e-131 471.9 324 71.3
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 9.9e-131 470.7 402 60.9
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 4.9e-130 468.4 346 66.8
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 8.4e-130 467.6 342 67.0
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.6e-128 463.4 380 64.5
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 1.0e-127 460.7 341 67.2
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 1.5e-126 456.8 348 67.5
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 2.4e-124 449.5 293 74.7
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 1.3e-122 443.7 352 64.2
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 2.2e-122 443.0 483 51.1
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 4.6e-120 435.3 274 77.0
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 6.6e-119 431.4 380 61.3
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 4.8e-117 425.2 334 63.5
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.4e-116 422.9 348 63.8
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 9.9e-115 417.5 334 63.5
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 1.5e-110 403.7 300 65.3
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 5.6e-110 401.7 300 65.3
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 2.1e-109 399.8 358 60.6
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 7.6e-107 391.3 350 53.7
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 1.9e-105 386.7 341 55.7
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 2.3e-103 379.8 339 56.0
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 6.5e-98 361.7 239 74.5
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 4.8e-93 345.5 342 54.7
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 1.9e-89 333.6 242 70.2
QL02p080121 Quercus lobata HOM05D002474 ORTHO05D006727 2.1e-88 330.1 194 80.4
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 1.3e-87 327.4 211 70.6
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 1.1e-86 324.3 384 44.0
Cc07_g02930 Coffea canephora HOM05D002474 ORTHO05D006727 5.9e-83 312.0 187 79.7
CBR_g50657 Chara braunii HOM05D002474 ORTHO05D006727 4.4e-78 295.8 297 50.8
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 7.7e-75 285.0 303 55.4
Manes.S095220 Manihot esculenta HOM05D002474 ORTHO05D006727 3.1e-68 263.1 176 73.3
Cc07_g02920 Coffea canephora HOM05D002474 ORTHO05D006727 1.4e-60 237.7 155 73.5
QL02p080117 Quercus lobata HOM05D002474 ORTHO05D006727 9.8e-54 214.9 137 75.9
Lsat_1_v5_gn_6_77521 Lactuca sativa HOM05D002474 ORTHO05D006727 1.7e-50 204.1 257 46.3
Rhsim10G0031600 Rhododendron simsii HOM05D002474 ORTHO05D006727 2.3e-50 203.8 159 66.7
HanXRQChr09g0265421 Helianthus annuus HOM05D002474 ORTHO05D006727 3.3e-41 173.3 121 67.8
SEGI_13584 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 5.2e-39 166.0 159 54.1
Lsat_1_v5_gn_2_107941 Lactuca sativa HOM05D002474 ORTHO05D005260 4.3e-33 146.4 236 39.8
Hund13251 Selenicereus undatus HOM05D002474 ORTHO05D006727 2.2e-29 134.0 98 69.4
C09p60950 Brassica napus HOM05D002474 ORTHO05D006727 2.9e-29 133.7 111 58.6
BolC9t56457H Brassica oleracea HOM05D002474 ORTHO05D006727 1.6e-24 117.9 103 56.3
BolC4t26228H Brassica oleracea HOM05D002474 ORTHO05D006727 2.2e-21 107.5 87 62.1
C09p36190 Brassica napus HOM05D002474 ORTHO05D006727 3.7e-21 106.7 96 55.2
MBI04_g20673_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 1.2e-19 101.7 130 44.6
Actinidia35021 Actinidia chinensis HOM05D002474 ORTHO05D006727 1.1e-17 95.1 182 39.0
BcaC04g18910 Brassica carinata HOM05D002474 ORTHO05D006727 1.2e-16 91.7 138 42.0
MCO07G529 Micromonas commoda HOM05D002474 ORTHO05D006727 2.8e-16 90.5 345 27.0
FAN10G3970 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.4e-15 88.2 52 80.8
MBI04_g20672_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 6.8e-15 85.9 102 47.1
Peaxi162Scf00036g01918 Petunia axillaris HOM05D002474 ORTHO05D006727 7.6e-14 82.4 63 55.6
FAN10G3068 Fragaria x ananassa HOM05D002474 ORTHO05D006727 3.8e-13 80.1 47 80.9
SEGI_37465 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 8.4e-13 79.0 51 66.7
Peaxi162Scf00781g00210 Petunia axillaris HOM05D002474 ORTHO05D006727 3.2e-12 77.0 56 57.1
CBR_g59258 Chara braunii HOM05D002474 ORTHO05D006727 7.8e-11 72.4 42 71.4
Cre09.g389400 Chlamydomonas reinhardtii HOM05D002474 ORTHO05D006727 7.8e-11 72.4 307 23.8
vmacro05749 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 5.1e-10 69.7 40 82.5
Glyma.13G065601 Glycine max HOM05D002474 ORTHO05D006727 1.1e-09 68.6 49 69.4
vmacro03926 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 4.3e-09 66.6 40 80.0
Rhsim10G0031800 Rhododendron simsii HOM05D002474 ORTHO05D006727 9.0e-07 58.9 33 72.7
SpUN0485_0010 Schrenkiella parvula HOM05D002474 ORTHO05D006727 1.2e-06 58.5 27 88.9
TAR629G0960 Trochodendron aralioides HOM05D006011 ORTHO05D007421 7.6e-06 55.8 34 76.5
FAN01G1046 Fragaria x ananassa HOM05D002474 ORTHO05D006727 9.9e-06 55.5 57 54.4


User provided reference genes

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