Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 3.2e-118 428.7 266 100.0
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 1.8e-44 183.7 234 54.7
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 1.8e-44 183.7 234 49.1
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 3.8e-34 149.4 228 44.7
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.3e-31 140.2 235 42.1
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 6.7e-31 138.7 228 56.6
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 1.9e-30 137.1 230 42.6
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 9.7e-30 134.8 232 42.2
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 1.7e-29 134.0 228 39.9
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 2.8e-29 133.3 230 41.7
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.5e-27 127.5 234 54.3
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 2.0e-27 127.1 234 39.7
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 2.0e-27 127.1 237 50.2
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 2.0e-27 127.1 231 44.6
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 2.6e-27 126.7 236 54.2
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 3.4e-27 126.3 270 34.8
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 3.4e-27 126.3 234 53.8
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 5.9e-27 125.6 228 45.2
Dinv35004 Davidia involucrata HOM05D007214 ORTHO05D008907 7.7e-27 125.2 209 59.3
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 1.3e-26 124.4 231 40.3
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 8.5e-26 121.7 237 43.0
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 1.2e-24 117.9 241 36.5
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 1.6e-24 117.5 232 38.8
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 1.6e-24 117.5 245 37.1
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 2.7e-24 116.7 228 50.9
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 1.8e-23 114.0 232 38.4
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 6.7e-23 112.1 228 50.0
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 6.7e-23 112.1 234 36.3
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 8.8e-23 111.7 270 45.2
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 1.5e-22 110.9 240 42.5
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 2.0e-22 110.5 238 36.6
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 2.0e-22 110.5 231 38.5
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 2.6e-22 110.2 228 35.1
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 2.6e-22 110.2 233 46.8
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 4.4e-22 109.4 237 36.7
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 1.7e-21 107.5 228 36.0
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 4.8e-21 105.9 236 36.9
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 6.3e-21 105.5 233 48.9
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 6.3e-21 105.5 238 50.8
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 8.2e-21 105.1 224 39.7
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 1.4e-20 104.4 236 36.4
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 9.1e-20 101.7 213 34.7
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 2.0e-19 100.5 233 48.5
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 7.7e-19 98.6 232 50.4
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 1.0e-18 98.2 228 48.7
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 1.0e-18 98.2 204 39.2
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 8.5e-18 95.1 229 48.5
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 2.5e-17 93.6 228 36.0
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 5.5e-17 92.4 232 41.4
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 2.1e-16 90.5 233 47.2
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 2.7e-16 90.1 226 50.0
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 4.7e-16 89.4 203 47.3
TPR.G39121 Trifolium pratense HOM05D007214 ORTHO05D008907 6.1e-16 89.0 250 32.4
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 2.3e-15 87.0 199 34.7
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 2.3e-15 87.0 100 49.0
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 5.2e-15 85.9 59 76.3
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 8.8e-15 85.1 226 32.3
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 8.8e-15 85.1 228 28.9
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 2.6e-14 83.6 231 42.9
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 7.4e-14 82.0 60 68.3
Sabra07G0063000 Salix brachista HOM05D007214 ORTHO05D008907 9.7e-14 81.6 60 70.0
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 1.7e-13 80.9 60 71.7
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 2.2e-13 80.5 233 38.2
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 2.8e-13 80.1 61 67.2
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 1.1e-12 78.2 196 49.0
Sed0019253 Sechium edule HOM05D007214 ORTHO05D008907 1.8e-12 77.4 229 43.7
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 2.4e-12 77.0 60 70.0
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 3.1e-12 76.6 99 50.5
TAR629G0039 Trochodendron aralioides HOM05D000068 ORTHO05D008907 4.1e-12 76.3 61 62.3
FAN05G0748 Fragaria x ananassa HOM05D007214 ORTHO05D008907 9.1e-12 75.1 106 45.3
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 9.1e-12 75.1 130 38.5
SGA_v2.0_scaffold205G41734 Striga asiatica HOM05D007214 ORTHO05D008907 5.9e-11 72.4 219 47.9
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 7.7e-11 72.0 232 34.1
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 7.7e-11 72.0 232 35.3
Aa31LG2G4670 Aethionema arabicum HOM05D007214 ORTHO05D008907 1.3e-10 71.2 228 31.1
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 1.3e-10 71.2 238 35.7
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 1.7e-10 70.9 236 36.0
Lsat_1_v5_gn_4_180400 Lactuca sativa HOM05D007214 ORTHO05D008907 1.7e-10 70.9 213 44.1
Sabra17G0063300 Salix brachista HOM05D007214 ORTHO05D008907 2.2e-10 70.5 69 58.0
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 3.8e-10 69.7 230 34.3
Thecc.04G070100 Theobroma cacao HOM05D007214 ORTHO05D008907 6.5e-10 68.9 197 44.2
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 8.5e-10 68.6 233 35.2
GSVIVG01032574001 Vitis vinifera HOM05D007214 ORTHO05D008907 1.9e-09 67.4 46 73.9
TPR.G39060 Trifolium pratense HOM05D007214 ORTHO05D008907 7.2e-09 65.5 71 49.3
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 9.4e-09 65.1 230 39.6
PGSC0003DMG400001300 Solanum tuberosum HOM05D007214 ORTHO05D008907 2.1e-08 63.9 53 64.2
HPP92_010494 Vanilla planifolia HOM05D007214 ORTHO05D008907 2.1e-08 63.9 239 29.7
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 3.6e-08 63.2 235 34.5
Oeu060589.1 Olea europaea HOM05D007214 ORTHO05D008907 3.6e-08 63.2 40 80.0
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 4.7e-08 62.8 226 44.7
unitig_746.g26578 Utricularia gibba HOM05D007214 ORTHO05D008907 8.0e-08 62.0 51 66.7
MSTRG.23970 Avicennia marina HOM05D007214 ORTHO05D008907 1.8e-07 60.8 46 67.4
ECA232G1410 Erigeron canadensis HOM05D007214 ORTHO05D008907 2.3e-07 60.5 232 41.8
Rhsim07G0133800 Rhododendron simsii HOM05D004072 ORTHO05D005933 5.2e-07 59.3 85 42.4
COL.COLO4_36999 Corchorus olitorius HOM05D007214 ORTHO05D008907 1.2e-06 58.2 209 45.0
CsaV3_3G041890 Cucumis sativus L. HOM05D062301 ORTHO05D008907 1.5e-06 57.8 225 40.4
HanXRQChr09g0265731 Helianthus annuus HOM05D007214 ORTHO05D008907 2.6e-06 57.0 234 38.0
Solyc11g070183.1 Solanum lycopersicum HOM05D007214 ORTHO05D008907 9.7e-06 55.1 103 35.9


User provided reference genes

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