Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33615 Davidia involucrata HOM05D005734 ORTHO05D006990 2.4e-108 395.6 212 100.0
Rhsim08G0034500 Rhododendron simsii HOM05D005734 ORTHO05D006990 1.3e-80 303.5 206 80.6
Lj2C466G2 Lonicera japonica HOM05D005734 ORTHO05D006990 1.8e-79 299.7 201 82.6
TAR376G0390 Trochodendron aralioides HOM05D005734 ORTHO05D006990 3.4e-78 295.4 210 73.8
Actinidia31004 Actinidia chinensis HOM05D005734 ORTHO05D006990 1.4e-76 290.0 191 81.7
Nitab4.5_0005721g0110 Nicotiana tabacum HOM05D005734 ORTHO05D006990 1.4e-76 290.0 203 78.3
Thecc.01G021200 Theobroma cacao HOM05D005734 ORTHO05D006990 7.1e-76 287.7 213 74.6
TWI09G0878 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 1.6e-75 286.6 205 76.6
Eucgr.K02152 Eucalyptus grandis HOM05D005734 ORTHO05D006990 2.1e-75 286.2 209 75.1
Nitab4.5_0004254g0030 Nicotiana tabacum HOM05D005734 ORTHO05D006990 2.7e-75 285.8 203 77.3
Solyc02g084220.3 Solanum lycopersicum HOM05D005734 ORTHO05D006990 6.0e-75 284.6 202 77.2
GSVIVG01018804001 Vitis vinifera HOM05D005734 ORTHO05D006990 1.0e-74 283.9 207 74.9
TWI73G0895 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 1.8e-74 283.1 208 75.0
TAR628G0339 Trochodendron aralioides HOM05D005734 ORTHO05D006990 2.3e-74 282.7 211 71.1
QL06p033653 Quercus lobata HOM05D005734 ORTHO05D006990 3.9e-74 282.0 197 76.1
SalBow3G4629 Salvia bowleyana HOM05D005734 ORTHO05D006990 3.9e-74 282.0 209 73.2
Sopen02g028960 Solanum pennellii HOM05D005734 ORTHO05D006990 3.9e-74 282.0 202 76.7
Lalb_Chr16g0391171 Lupinus albus HOM05D005734 ORTHO05D006990 6.7e-74 281.2 202 73.8
Peaxi162Scf00083g00086 Petunia axillaris HOM05D005734 ORTHO05D006990 6.7e-74 281.2 192 78.1
Phvul.002G110400 Phaseolus vulgaris HOM05D005734 ORTHO05D006990 6.7e-74 281.2 207 71.5
Ciclev10026469m.g Citrus clementina HOM05D005734 ORTHO05D006990 8.7e-74 280.8 215 72.1
Cc07_g10570 Coffea canephora HOM05D005734 ORTHO05D006990 8.7e-74 280.8 188 80.3
COL.COLO4_21933 Corchorus olitorius HOM05D005734 ORTHO05D006990 1.1e-73 280.4 208 74.0
Glyma.11G075600 Glycine max HOM05D005734 ORTHO05D006990 7.4e-73 277.7 208 71.6
MD15G1247200 Malus domestica HOM05D005734 ORTHO05D006990 7.4e-73 277.7 214 70.6
Manes.02G102700 Manihot esculenta HOM05D005734 ORTHO05D006990 9.6e-73 277.3 214 72.9
VMungo1215G0268 Vigna mungo HOM05D005734 ORTHO05D006990 1.3e-72 276.9 207 70.5
MD02G1134200 Malus domestica HOM05D005734 ORTHO05D006990 2.1e-72 276.2 214 70.6
Ca_24908_v3 Cicer arietinum L. HOM05D005734 ORTHO05D006990 6.2e-72 274.6 207 70.5
Glyma.01G167600 Glycine max HOM05D005734 ORTHO05D006990 1.4e-71 273.5 207 70.5
MSTRG.2698 Avicennia marina HOM05D005734 ORTHO05D006990 2.4e-71 272.7 190 76.8
TPR.G2344 Trifolium pratense HOM05D005734 ORTHO05D006990 2.4e-71 272.7 207 69.6
Nn6g32291 Nelumbo nucifera HOM05D005734 ORTHO05D006990 5.3e-71 271.6 186 76.9
PSO210G7806 Papaver somniferum HOM05D005734 ORTHO05D006990 5.3e-71 271.6 184 80.4
CSS0031169 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 6.9e-71 271.2 190 78.4
Gorai.003G010600 Gossypium raimondii HOM05D005734 ORTHO05D006990 1.2e-70 270.4 206 71.8
PGSC0003DMG400003554 Solanum tuberosum HOM05D005734 ORTHO05D006990 1.2e-70 270.4 228 68.9
Medtr5g021750 Medicago truncatula HOM05D005734 ORTHO05D006990 1.5e-70 270.0 203 70.0
Gohir.D03G010200 Gossypium hirsutum HOM05D005734 ORTHO05D006990 3.4e-70 268.9 185 76.8
FAN19G0086 Fragaria x ananassa HOM05D005734 ORTHO05D006990 4.5e-70 268.5 213 68.1
RcHm_v2.0_Chr2g0099641 Rosa chinensis HOM05D005734 ORTHO05D006990 4.5e-70 268.5 213 68.5
Migut.H01144 Erythranthe guttata HOM05D005734 ORTHO05D006990 1.0e-69 267.3 195 73.8
Lj2g0025294 Lotus japonicus HOM05D005734 ORTHO05D006990 1.0e-69 267.3 209 71.8
Sabra07G0011400 Salix brachista HOM05D005734 ORTHO05D006990 1.0e-69 267.3 213 70.0
FvH4_1g12000 Fragaria vesca HOM05D005734 ORTHO05D006990 2.2e-69 266.2 213 67.6
Gohir.A02G169800 Gossypium hirsutum HOM05D005734 ORTHO05D006990 2.9e-69 265.8 187 75.4
EL10Ac3g07303 Beta vulgaris HOM05D005734 ORTHO05D006990 3.8e-69 265.4 191 72.8
CiPaw.08G133400 Carya illinoinensis HOM05D005734 ORTHO05D006990 3.8e-69 265.4 183 77.6
Duzib147G0754 Durio zibethinus HOM05D005734 ORTHO05D006990 3.8e-69 265.4 215 71.2
Potri.005G116300 Populus trichocarpa HOM05D005734 ORTHO05D006990 4.9e-69 265.0 199 72.4
ClCG07G008420 Citrullus lanatus HOM05D005734 ORTHO05D006990 1.9e-68 263.1 214 66.8
CsaV3_4G005730 Cucumis sativus L. HOM05D005734 ORTHO05D006990 4.2e-68 261.9 214 66.4
DCAR_017347 Daucus carota HOM05D005734 ORTHO05D006990 7.1e-68 261.2 188 75.0
Sed0005630 Sechium edule HOM05D005734 ORTHO05D006990 7.1e-68 261.2 214 67.3
Psat2g155360 Pisum sativum HOM05D005734 ORTHO05D006990 2.1e-67 259.6 207 65.7
Sabra05G0095300 Salix brachista HOM05D005734 ORTHO05D006990 1.3e-66 256.9 186 74.2
Ah.03g141620 Amaranthus hybridus HOM05D005734 ORTHO05D006990 6.7e-66 254.6 183 74.9
THA.LOC104819182 Tarenaya hassleriana HOM05D005734 ORTHO05D006990 1.9e-65 253.1 186 71.5
Cpa.g.sc6.229 Carica papaya HOM05D005734 ORTHO05D006990 3.3e-65 252.3 208 67.8
Thhalv10004735m.g Eutrema salsugineum HOM05D005734 ORTHO05D006990 3.3e-65 252.3 183 72.7
AT5G66290 Arabidopsis thaliana HOM05D005734 ORTHO05D006990 7.4e-65 251.1 198 67.2
Carub.0008s2820 Capsella rubella HOM05D005734 ORTHO05D006990 7.4e-65 251.1 187 70.6
Hund14038 Selenicereus undatus HOM05D005734 ORTHO05D006990 7.4e-65 251.1 225 64.0
AL8G45230 Arabidopsis lyrata HOM05D005734 ORTHO05D006990 9.6e-65 250.8 187 70.6
arahy.Tifrunner.gnm1.ann1.GC558H Arachis hypogaea HOM05D005734 ORTHO05D006990 9.6e-65 250.8 209 65.6
Sp2g30330 Schrenkiella parvula HOM05D005734 ORTHO05D006990 1.6e-64 250.0 185 71.9
Aa31LG1G14770 Aethionema arabicum HOM05D005734 ORTHO05D006990 2.8e-64 249.2 187 70.6
Aqoxy4G02678 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 8.2e-64 247.7 235 61.3
Aqoxy4G02673 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 1.8e-63 246.5 234 61.1
A07p17570 Brassica napus HOM05D005734 ORTHO05D006990 5.8e-62 241.5 187 69.5
Lsat_1_v5_gn_3_73980 Lactuca sativa HOM05D005734 ORTHO05D006990 5.8e-62 241.5 181 74.0
BcaC06g34694 Brassica carinata HOM05D005734 ORTHO05D006990 8.4e-61 237.7 191 67.5
C07p25530 Brassica napus HOM05D005734 ORTHO05D006990 8.4e-61 237.7 191 67.5
BolC7t43073H Brassica oleracea HOM05D005734 ORTHO05D006990 8.4e-61 237.7 191 67.5
BcaB02g10036 Brassica carinata HOM05D005734 ORTHO05D006990 1.9e-60 236.5 188 67.6
ATR0147G004 Amborella trichopoda HOM05D005734 ORTHO05D006990 2.5e-60 236.1 180 70.0
MBI05_g26512_MAGBIO Magnolia biondii HOM05D005734 ORTHO05D006990 3.2e-60 235.7 194 67.5
ECA246G4348 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.6e-59 233.4 191 69.1
unitig_699.g19712 Utricularia gibba HOM05D005734 ORTHO05D006990 1.6e-59 233.4 188 67.0
HanXRQChr15g0482851 Helianthus annuus HOM05D005734 ORTHO05D006990 2.7e-59 232.6 192 69.8
BcaNung04509 Brassica carinata HOM05D005734 ORTHO05D006990 7.9e-59 231.1 188 67.6
BcaNung05273 Brassica carinata HOM05D005734 ORTHO05D006990 1.0e-58 230.7 209 62.7
BcaC04g23120 Brassica carinata HOM05D005734 ORTHO05D006990 1.3e-58 230.3 187 67.9
BcaC04g23124 Brassica carinata HOM05D005734 ORTHO05D006990 1.3e-58 230.3 187 67.9
HanXRQChr16g0531031 Helianthus annuus HOM05D005734 ORTHO05D006990 1.8e-58 229.9 189 70.4
vmacro18422 Vaccinium macrocarpon HOM05D005734 ORTHO05D006990 1.8e-58 229.9 250 58.4
Prupe.7G166600 Prunus persica HOM05D005734 ORTHO05D006990 3.0e-58 229.2 212 61.3
HPP92_018404 Vanilla planifolia HOM05D005734 ORTHO05D006990 5.1e-58 228.4 189 67.7
C09p11890 Brassica napus HOM05D005734 ORTHO05D006990 1.5e-57 226.9 169 71.0
BolC9t54077H Brassica oleracea HOM05D005734 ORTHO05D006990 1.5e-57 226.9 169 71.0
CSS0012385 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 1.9e-57 226.5 153 79.7
Nn5g29268 Nelumbo nucifera HOM05D005734 ORTHO05D006990 2.5e-57 226.1 207 62.8
Os03g0727100 Oryza sativa ssp. japonica HOM05D005734 ORTHO05D006990 2.5e-57 226.1 199 66.8
CSS0021905 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 4.3e-57 225.3 153 79.7
Zm00001eb055930 Zea mays HOM05D005734 ORTHO05D006990 5.7e-57 224.9 212 63.7
FAN26G0019 Fragaria x ananassa HOM05D005734 ORTHO05D006990 2.2e-56 223.0 205 61.0
RcHm_v2.0_Chr1g0353231 Rosa chinensis HOM05D005734 ORTHO05D006990 1.8e-55 219.9 167 68.9
RcHm_v2.0_Chr5g0080231 Rosa chinensis HOM05D005734 ORTHO05D006990 4.1e-55 218.8 155 72.9
RcHm_v2.0_Chr0c39g0503221 Rosa chinensis HOM05D005734 ORTHO05D006990 6.9e-55 218.0 145 75.2
Gohir.A12G060300 Gossypium hirsutum HOM05D005734 ORTHO05D006990 1.5e-54 216.9 185 64.3
CARHR281420 Cardamine hirsuta HOM05D005734 ORTHO05D006990 3.4e-54 215.7 144 76.4
Cfa006957 Carpinus fangiana HOM05D005734 ORTHO05D006990 1.1e-52 210.7 211 58.3
Lsat_1_v5_gn_4_152781 Lactuca sativa HOM05D005734 ORTHO05D006990 7.2e-52 208.0 169 66.3
Sc16g0002040 Simmondsia chinensis HOM05D005734 ORTHO05D006990 3.6e-51 205.7 139 79.9
A09p10030 Brassica napus HOM05D005734 ORTHO05D006990 3.0e-50 202.6 213 54.0
Atru.chr3.782 Acer truncatum HOM05D005734 ORTHO05D006990 2.8e-48 196.1 188 59.0
QL06p033647 Quercus lobata HOM05D005734 ORTHO05D006990 2.4e-47 193.0 128 75.8
SGA_v2.0_scaffold137G35098 Striga asiatica HOM05D005734 ORTHO05D006990 3.4e-46 189.1 116 82.8
FAN23G1819 Fragaria x ananassa HOM05D005734 ORTHO05D006990 4.5e-46 188.7 199 57.8
arahy.Tifrunner.gnm1.ann1.DFQ3ES Arachis hypogaea HOM05D005734 ORTHO05D006990 3.8e-45 185.7 139 69.1
AUR62018084 Chenopodium quinoa HOM05D005734 ORTHO05D006990 5.5e-44 181.8 124 73.4
Potri.007G014000 Populus trichocarpa HOM05D005734 ORTHO05D006990 3.0e-42 176.0 136 71.3
MELO3C016376.2 Cucumis melo HOM05D005734 ORTHO05D006990 1.3e-40 170.6 137 69.3
ATR0876G001 Amborella trichopoda HOM05D005734 ORTHO05D006990 1.7e-40 170.2 111 73.0
PSO170G3799 Papaver somniferum HOM05D005734 ORTHO05D006990 3.1e-39 166.0 122 76.2
CDE11G0627 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 7.5e-33 144.8 102 70.6
Mapoly0166s0009 Marchantia polymorpha HOM05D005734 ORTHO05D006990 7.7e-30 134.8 178 42.7
Pp3c14_25740 Physcomitrium patens HOM05D005734 ORTHO05D006990 2.9e-29 132.9 177 44.6
Gorai.008G063500 Gossypium raimondii HOM05D005734 ORTHO05D006990 5.0e-29 132.1 113 63.7
Sc18g0002570 Simmondsia chinensis HOM05D005734 ORTHO05D006990 1.9e-28 130.2 83 81.9
CDE05G1720 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 4.2e-28 129.0 148 55.4
FAN28G1963 Fragaria x ananassa HOM05D005734 ORTHO05D006990 5.5e-28 128.6 99 70.7
Sc16g0006390 Simmondsia chinensis HOM05D005734 ORTHO05D006990 9.4e-28 127.9 83 80.7
Lj2A474G36 Lonicera japonica HOM05D005734 ORTHO05D006990 2.7e-27 126.3 151 53.6
Lsat_1_v5_gn_4_38760 Lactuca sativa HOM05D005734 ORTHO05D006990 1.4e-26 124.0 121 57.0
Sc09g0006730 Simmondsia chinensis HOM05D005734 ORTHO05D006990 2.3e-26 123.2 83 78.3
Pp3c1_42750 Physcomitrium patens HOM05D005734 ORTHO05D006990 7.5e-25 118.2 193 39.4
BraA09t36646Z Brassica rapa HOM05D005734 ORTHO05D006990 1.7e-24 117.1 93 66.7
Haze_03794 Corylus avellana HOM05D005734 ORTHO05D006990 1.8e-23 113.6 69 85.5
Medtr5g021780 Medicago truncatula HOM05D005734 ORTHO05D006990 7.7e-22 108.2 84 65.5
Lj2C474G2 Lonicera japonica HOM05D005734 ORTHO05D006990 8.5e-21 104.8 66 81.8
RcHm_v2.0_Chr2g0126361 Rosa chinensis HOM05D005734 ORTHO05D006990 5.2e-18 95.5 62 71.0
Gohir.D12G060400 Gossypium hirsutum HOM05D005734 ORTHO05D006990 6.8e-18 95.1 78 64.1
SMO228G0004 Selaginella moellendorffii HOM05D005734 ORTHO05D006990 1.3e-16 90.9 105 43.8
AagrBONN_evm.TU.Sc2ySwM_117.481 Anthoceros agrestis HOM05D005734 ORTHO05D006990 8.3e-16 88.2 138 39.1
Eucgr.L03507 Eucalyptus grandis HOM05D005734 ORTHO05D006990 7.3e-12 75.1 82 54.9
CSS0018444 Camellia sinensis var. sinensis HOM05D049081 ORTHO05D112653 6.4e-08 62.0 40 82.5
CSS0030303 Camellia sinensis var. sinensis HOM05D049081 ORTHO05D109731 1.4e-07 60.8 40 82.5


User provided reference genes

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