Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 1.8e-184 649.0 306 100.0
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 2.2e-174 615.5 306 96.4
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 9.4e-170 600.1 306 92.8
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 3.0e-168 595.1 308 92.5
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 9.7e-167 590.1 305 92.5
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 9.7e-167 590.1 306 91.8
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 2.8e-166 588.6 306 91.8
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 6.9e-165 583.9 306 90.2
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 3.4e-164 581.6 305 90.5
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 7.7e-164 580.5 306 89.9
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 1.3e-163 579.7 305 89.2
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 1.3e-163 579.7 306 89.5
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 1.3e-163 579.7 304 89.5
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 2.2e-163 578.9 306 89.5
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 3.8e-163 578.2 312 87.2
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 1.1e-162 576.6 306 89.5
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 1.1e-162 576.6 306 88.2
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 2.5e-162 575.5 306 90.2
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 4.2e-162 574.7 307 89.3
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 5.5e-162 574.3 307 90.6
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 9.4e-162 573.5 306 89.9
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 1.2e-161 573.2 306 89.2
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 1.2e-161 573.2 305 90.2
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 1.6e-161 572.8 306 89.5
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 1.6e-161 572.8 306 89.5
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 2.7e-161 572.0 306 88.6
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 3.6e-161 571.6 321 84.1
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 4.7e-161 571.2 305 88.9
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 4.7e-161 571.2 305 88.9
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 6.1e-161 570.9 306 87.3
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 6.1e-161 570.9 306 88.6
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 2.3e-160 568.9 307 87.0
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 2.3e-160 568.9 306 89.5
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 3.0e-160 568.5 306 89.2
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 3.0e-160 568.5 306 85.9
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 5.1e-160 567.8 306 86.6
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 8.8e-160 567.0 299 88.3
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 1.1e-159 566.6 306 87.6
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 1.5e-159 566.2 306 86.3
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 1.5e-159 566.2 306 87.9
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 2.6e-159 565.5 306 89.2
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 2.6e-159 565.5 306 85.9
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 4.4e-159 564.7 306 85.6
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 5.7e-159 564.3 306 87.3
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 7.4e-159 563.9 306 87.9
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 9.7e-159 563.5 306 87.6
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 9.7e-159 563.5 304 86.5
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 9.7e-159 563.5 304 86.5
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 9.7e-159 563.5 306 85.3
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 1.3e-158 563.1 299 87.6
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.3e-158 563.1 306 86.6
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 1.7e-158 562.8 306 87.9
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 2.2e-158 562.4 317 85.8
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 2.8e-158 562.0 307 85.3
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 6.3e-158 560.8 306 87.9
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 8.2e-158 560.5 306 85.0
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 8.2e-158 560.5 306 87.3
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 1.4e-157 559.7 306 85.6
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 9.1e-157 557.0 306 86.9
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 1.5e-156 556.2 306 84.6
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 1.5e-156 556.2 306 85.3
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 4.5e-156 554.7 335 79.4
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 4.5e-156 554.7 306 85.6
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 5.9e-156 554.3 296 89.9
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 5.9e-156 554.3 306 86.9
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 1.3e-155 553.1 292 87.7
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 2.2e-155 552.4 306 84.3
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 2.2e-155 552.4 306 85.6
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 2.9e-155 552.0 305 83.9
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 1.4e-154 549.7 306 85.6
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 3.2e-154 548.5 291 87.6
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 5.5e-154 547.7 313 83.7
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 1.2e-153 546.6 306 84.6
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 1.6e-153 546.2 306 82.4
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 2.1e-153 545.8 306 83.0
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 6.1e-153 544.3 307 82.7
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 8.0e-153 543.9 306 82.0
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 1.4e-152 543.1 306 82.7
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 5.2e-152 541.2 317 81.7
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 6.7e-152 540.8 337 78.0
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 1.5e-151 539.7 306 83.7
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 1.5e-151 539.7 307 83.1
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 4.8e-150 534.6 306 81.7
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 4.8e-150 534.6 307 83.1
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 8.2e-150 533.9 308 82.8
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 1.1e-149 533.5 306 82.0
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.4e-149 532.3 306 84.3
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 9.1e-149 530.4 309 82.5
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 1.3e-147 526.6 306 81.0
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 2.1e-145 519.2 306 82.0
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 1.0e-144 516.9 275 87.3
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.4e-144 516.5 300 82.7
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 2.3e-144 515.8 290 82.1
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 2.3e-144 515.8 290 82.1
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 1.3e-142 510.0 306 77.5
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 3.7e-142 508.4 292 81.5
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 2.4e-141 505.8 291 80.8
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 4.1e-141 505.0 323 77.7
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 4.1e-141 505.0 305 80.0
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.0e-139 500.4 290 82.8
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 5.0e-139 498.0 291 80.1
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 1.1e-138 496.9 291 79.7
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 5.5e-138 494.6 291 79.4
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 1.2e-137 493.4 291 79.0
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 1.6e-137 493.0 313 75.7
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.6e-137 493.0 270 86.7
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 2.7e-137 492.3 289 82.4
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 3.0e-136 488.8 283 83.4
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 1.2e-132 476.9 313 73.8
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 2.7e-132 475.7 314 77.4
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 5.9e-132 474.6 310 71.9
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 1.5e-130 469.9 310 72.6
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 2.8e-129 465.7 306 76.8
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 6.8e-128 461.1 310 70.6
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 4.9e-126 454.9 243 88.9
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 5.4e-125 451.4 309 69.9
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 2.0e-119 433.0 242 82.2
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 3.3e-114 415.6 301 68.8
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 3.4e-111 405.6 314 63.7
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 9.2e-109 397.5 307 62.5
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 6.6e-107 391.3 209 88.5
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 1.2e-92 344.0 188 85.6
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 1.6e-81 307.0 158 88.6
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 2.1e-73 280.0 146 87.7
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 3.0e-67 259.6 179 68.7
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 6.1e-60 235.3 146 77.4
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 1.8e-59 233.8 172 65.1
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.8e-56 223.8 116 90.5
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 4.5e-55 219.2 333 39.0
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 6.7e-51 205.3 306 44.1
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 1.6e-44 184.1 141 66.0
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 6.8e-27 125.6 63 84.1
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 2.0e-23 114.0 203 39.9
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 1.6e-20 104.4 84 63.1


User provided reference genes

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