Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33599 Davidia involucrata HOM05D001544 ORTHO05D005712 2.0e-69 265.8 147 100.0
Dinv40055 Davidia involucrata HOM05D001544 ORTHO05D005712 1.4e-46 189.9 128 76.6
Hma1.2p1_0266F.1_g106940 Hydrangea macrophylla HOM05D001544 ORTHO05D005712 1.1e-38 163.7 94 78.7
Lj4A214G24 Lonicera japonica HOM05D001544 ORTHO05D005712 1.2e-37 160.2 128 71.1
Nitab4.5_0010830g0030 Nicotiana tabacum HOM05D001544 ORTHO05D005712 2.0e-37 159.5 93 77.4
Rhsim10G0214300 Rhododendron simsii HOM05D001544 ORTHO05D005712 3.5e-37 158.7 123 65.9
HanXRQChr14g0441601 Helianthus annuus HOM05D001544 ORTHO05D005712 4.5e-37 158.3 128 60.9
vmacro21904 Vaccinium macrocarpon HOM05D001544 ORTHO05D005712 2.2e-36 156.0 120 65.0
Nitab4.5_0000753g0030 Nicotiana tabacum HOM05D001544 ORTHO05D005712 2.9e-36 155.6 90 77.8
Cc07_g10380 Coffea canephora HOM05D001544 ORTHO05D005712 6.5e-36 154.5 93 75.3
Lsat_1_v5_gn_2_78361 Lactuca sativa HOM05D001544 ORTHO05D005712 6.5e-36 154.5 126 58.7
HanXRQChr13g0414781 Helianthus annuus HOM05D001544 ORTHO05D005712 8.5e-36 154.1 94 74.5
CSS0007563 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D005712 1.9e-35 152.9 123 69.1
CSS0013177 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D005712 2.5e-35 152.5 123 67.5
Nn5g29207 Nelumbo nucifera HOM05D001544 ORTHO05D002732 1.2e-34 150.2 93 74.2
MSTRG.23282 Avicennia marina HOM05D001544 ORTHO05D005712 1.0e-33 147.1 92 70.7
ECA238G2610 Erigeron canadensis HOM05D002906 ORTHO05D003211 5.2e-33 144.8 93 73.1
GSVIVG01024183001 Vitis vinifera HOM05D001544 ORTHO05D005712 1.2e-32 143.7 93 69.9
TAR625G1395 Trochodendron aralioides HOM05D001544 ORTHO05D005712 2.6e-32 142.5 120 60.0
Thecc.02G076200 Theobroma cacao HOM05D001544 ORTHO05D005712 1.3e-31 140.2 126 55.6
Atru.chr5.3135 Acer truncatum HOM05D001544 ORTHO05D005712 1.7e-31 139.8 93 67.7
MELO3C023351.2 Cucumis melo HOM05D001544 ORTHO05D005712 1.7e-31 139.8 122 53.3
vmacro22095 Vaccinium macrocarpon HOM05D001544 ORTHO05D005712 1.7e-31 139.8 127 54.3
PGSC0003DMG401022539 Solanum tuberosum HOM05D001544 ORTHO05D005712 2.2e-31 139.4 94 67.0
Gohir.A03G198800 Gossypium hirsutum HOM05D001544 ORTHO05D005712 2.8e-31 139.0 94 69.1
Gohir.D02G220200 Gossypium hirsutum HOM05D001544 ORTHO05D005712 2.8e-31 139.0 94 69.1
Gorai.005G248100 Gossypium raimondii HOM05D001544 ORTHO05D005712 2.8e-31 139.0 94 69.1
TWI75G0115 Tripterygium wilfordii HOM05D001544 ORTHO05D005712 2.8e-31 139.0 127 55.9
Aqoxy5G01497 Aquilegia oxysepala HOM05D001544 ORTHO05D005712 3.7e-31 138.7 93 67.7
PGSC0003DMG402003620 Solanum tuberosum HOM05D001544 ORTHO05D005712 3.7e-31 138.7 84 75.0
Sopen03g006440 Solanum pennellii HOM05D001544 ORTHO05D005712 6.3e-31 137.9 92 66.3
Ciclev10029261m.g Citrus clementina HOM05D001544 ORTHO05D005712 8.2e-31 137.5 97 66.0
Migut.L00036 Erythranthe guttata HOM05D001544 ORTHO05D005712 1.1e-30 137.1 120 55.0
Lalb_Chr01g0002161 Lupinus albus HOM05D001544 ORTHO05D005712 1.1e-30 137.1 93 64.5
ClCG11G003920 Citrullus lanatus HOM05D001544 ORTHO05D005712 1.4e-30 136.7 95 63.2
CsaV3_2G015260 Cucumis sativus L. HOM05D001544 ORTHO05D005712 1.8e-30 136.3 121 53.7
Dinv23461 Davidia involucrata HOM05D001544 ORTHO05D005712 1.8e-30 136.3 93 66.7
Duzib132G0442 Durio zibethinus HOM05D001544 ORTHO05D005712 1.8e-30 136.3 91 69.2
SalBow8G0407 Salvia bowleyana HOM05D001544 ORTHO05D005712 1.8e-30 136.3 133 47.4
Sopen02g029220 Solanum pennellii HOM05D001544 ORTHO05D005712 1.8e-30 136.3 115 59.1
Oeu021945.1 Olea europaea HOM05D001544 ORTHO05D005712 2.4e-30 136.0 100 61.0
QL11p046076 Quercus lobata HOM05D001544 ORTHO05D005712 3.1e-30 135.6 93 66.7
Solyc03g033650.3 Solanum lycopersicum HOM05D001544 ORTHO05D005712 3.1e-30 135.6 92 65.2
Phvul.011G039500 Phaseolus vulgaris HOM05D001544 ORTHO05D005712 4.1e-30 135.2 93 63.4
Solyc02g084550.3 Solanum lycopersicum HOM05D001544 ORTHO05D005712 4.1e-30 135.2 114 58.8
TWI79G0125 Tripterygium wilfordii HOM05D001544 ORTHO05D005712 5.3e-30 134.8 93 64.5
Glyma.11G111600 Glycine max HOM05D001544 ORTHO05D005712 7.0e-30 134.4 93 65.6
HPP92_022282 Vanilla planifolia HOM05D001544 ORTHO05D005712 7.0e-30 134.4 93 63.4
Psat7g226160 Pisum sativum HOM05D001544 ORTHO05D005712 1.6e-29 133.3 92 63.0
Lj3g0003276 Lotus japonicus HOM05D001544 ORTHO05D005712 2.0e-29 132.9 93 63.4
TPR.G34176 Trifolium pratense HOM05D001544 ORTHO05D005712 2.7e-29 132.5 92 63.0
Lalb_Chr19g0138931 Lupinus albus HOM05D001544 ORTHO05D005712 3.5e-29 132.1 128 51.6
SGA_v2.0_scaffold2G01246 Striga asiatica HOM05D001544 ORTHO05D005712 3.5e-29 132.1 93 61.3
Cpa.g.sc6.211 Carica papaya HOM05D001544 ORTHO05D005712 4.5e-29 131.7 116 54.3
Prupe.8G085800 Prunus persica HOM05D001544 ORTHO05D005712 4.5e-29 131.7 118 59.3
Medtr4g032740 Medicago truncatula HOM05D001544 ORTHO05D005712 7.7e-29 131.0 91 62.6
Sed0017058 Sechium edule HOM05D001544 ORTHO05D005712 7.7e-29 131.0 128 51.6
SGA_v2.0_scaffold51G18782 Striga asiatica HOM05D001544 ORTHO05D005712 1.0e-28 130.6 94 59.6
CiPaw.06G128900 Carya illinoinensis HOM05D001544 ORTHO05D005712 2.9e-28 129.0 126 50.0
Sed0002010 Sechium edule HOM05D001544 ORTHO05D005712 3.8e-28 128.6 93 60.2
Hund14027 Selenicereus undatus HOM05D001544 ORTHO05D005712 3.8e-28 128.6 95 64.2
Sc03g0003410 Simmondsia chinensis HOM05D001544 ORTHO05D005712 5.0e-28 128.3 93 62.4
unitig_0.g2167 Utricularia gibba HOM05D001544 ORTHO05D005712 6.5e-28 127.9 85 65.9
AT3G51100 Arabidopsis thaliana HOM05D001544 ORTHO05D005712 2.5e-27 125.9 93 62.4
arahy.Tifrunner.gnm1.ann1.3TM7ML Arachis hypogaea HOM05D001544 ORTHO05D005712 2.5e-27 125.9 93 60.2
arahy.Tifrunner.gnm1.ann1.3WL649 Arachis hypogaea HOM05D001544 ORTHO05D005712 2.5e-27 125.9 93 60.2
Peaxi162Scf00010g00610 Petunia axillaris HOM05D001544 ORTHO05D005712 3.2e-27 125.6 71 78.9
VMungo1127G0458 Vigna mungo HOM05D001544 ORTHO05D005712 3.2e-27 125.6 92 58.7
Eucgr.G01724 Eucalyptus grandis HOM05D001544 ORTHO05D005712 4.2e-27 125.2 93 59.1
Glyma.01G006900 Glycine max HOM05D001544 ORTHO05D005712 4.2e-27 125.2 93 59.1
PSO170G3698 Papaver somniferum HOM05D001544 ORTHO05D005712 4.2e-27 125.2 93 61.3
AL5G31520 Arabidopsis lyrata HOM05D001544 ORTHO05D005712 5.5e-27 124.8 93 61.3
MD10G1064100 Malus domestica HOM05D001544 ORTHO05D005712 5.5e-27 124.8 92 62.0
PSO210G7387 Papaver somniferum HOM05D001544 ORTHO05D005712 5.5e-27 124.8 93 61.3
Aqoxy6G02390 Aquilegia oxysepala HOM05D001544 ORTHO05D005712 1.2e-26 123.6 94 59.6
Carub.0005s1750 Capsella rubella HOM05D001544 ORTHO05D005712 1.2e-26 123.6 93 60.2
Thhalv10010713m.g Eutrema salsugineum HOM05D001544 ORTHO05D005712 1.2e-26 123.6 101 58.4
Sp5g11110 Schrenkiella parvula HOM05D001544 ORTHO05D005712 1.2e-26 123.6 92 62.0
CANSAT11G1780 Cannabis sativa HOM05D001544 ORTHO05D005712 1.6e-26 123.2 93 61.3
Cfa005097 Carpinus fangiana HOM05D001544 ORTHO05D005712 2.7e-26 122.5 126 50.0
CARHR160690 Cardamine hirsuta HOM05D001544 ORTHO05D005712 3.6e-26 122.1 93 60.2
Aa31LG4G19200 Aethionema arabicum HOM05D001544 ORTHO05D005712 4.7e-26 121.7 93 59.1
BcaC06g33056 Brassica carinata HOM05D001544 ORTHO05D005712 6.1e-26 121.3 93 60.2
A03p48120 Brassica napus HOM05D001544 ORTHO05D005712 6.1e-26 121.3 93 60.2
C07p46160 Brassica napus HOM05D001544 ORTHO05D005712 6.1e-26 121.3 93 60.2
BolC7t45132H Brassica oleracea HOM05D001544 ORTHO05D005712 6.1e-26 121.3 93 60.2
BraA03t13919Z Brassica rapa HOM05D001544 ORTHO05D005712 6.1e-26 121.3 93 60.2
QL06p034007 Quercus lobata HOM05D001544 ORTHO05D005712 6.1e-26 121.3 121 50.4
EL10As8g23856 Beta vulgaris HOM05D001544 ORTHO05D005712 1.0e-25 120.6 120 50.8
Migut.H02483 Erythranthe guttata HOM05D001544 ORTHO05D005712 1.4e-25 120.2 78 67.9
SEGI_21342 Sequoiadendron giganteum HOM05D001544 ORTHO05D005712 1.4e-25 120.2 93 61.3
arahy.Tifrunner.gnm1.ann1.N6BS4T Arachis hypogaea HOM05D001544 ORTHO05D005712 1.8e-25 119.8 91 58.2
PGR042G1893 Punica granatum HOM05D001544 ORTHO05D005712 1.8e-25 119.8 91 57.1
FvH4_2g10310 Fragaria vesca HOM05D001544 ORTHO05D005712 2.3e-25 119.4 92 62.0
FAN15G2093 Fragaria x ananassa HOM05D001544 ORTHO05D005712 2.3e-25 119.4 92 59.8
FAN20G3124 Fragaria x ananassa HOM05D001544 ORTHO05D005712 2.3e-25 119.4 92 62.0
THA.LOC104821318 Tarenaya hassleriana HOM05D001544 ORTHO05D005712 2.3e-25 119.4 93 58.1
RcHm_v2.0_Chr6g0267511 Rosa chinensis HOM05D001544 ORTHO05D005712 3.0e-25 119.0 92 60.9
Potri.005G117400 Populus trichocarpa HOM05D001544 ORTHO05D005712 4.0e-25 118.6 93 61.3
Potri.007G016200 Populus trichocarpa HOM05D001544 ORTHO05D005712 5.2e-25 118.2 93 61.3
FAN24G0484 Fragaria x ananassa HOM05D001544 ORTHO05D005712 6.8e-25 117.9 92 60.9
Manes.01G142600 Manihot esculenta HOM05D001544 ORTHO05D005712 6.8e-25 117.9 124 63.7
Zm00001eb227920 Zea mays HOM05D001544 ORTHO05D005712 8.8e-25 117.5 94 54.3
PSO675G4981 Papaver somniferum HOM05D001544 ORTHO05D005712 1.5e-24 116.7 105 57.1
DCAR_025988 Daucus carota HOM05D001544 ORTHO05D005712 3.4e-24 115.5 94 56.4
Manes.02G100900 Manihot esculenta HOM05D001544 ORTHO05D005712 4.4e-24 115.2 127 51.2
PSO541G2534 Papaver somniferum HOM05D001544 ORTHO05D005712 4.4e-24 115.2 105 57.1
Haze_03811 Corylus avellana HOM05D001544 ORTHO05D005712 5.7e-24 114.8 123 51.2
Lj3g0002354 Lotus japonicus HOM05D001544 ORTHO05D005712 1.3e-23 113.6 92 57.6
Os06g0713900 Oryza sativa ssp. japonica HOM05D001544 ORTHO05D005712 2.2e-23 112.8 92 53.3
CiPaw.07G055800 Carya illinoinensis HOM05D001544 ORTHO05D005712 2.8e-23 112.5 98 56.1
RcHm_v2.0_Chr2g0099951 Rosa chinensis HOM05D001544 ORTHO05D005712 1.4e-22 110.2 96 57.3
MD15G1249400 Malus domestica HOM05D001544 ORTHO05D005712 1.8e-22 109.8 94 55.3
Prupe.7G164800 Prunus persica HOM05D001544 ORTHO05D005712 2.4e-22 109.4 95 53.7
Thecc.01G023700 Theobroma cacao HOM05D001544 ORTHO05D005712 1.6e-21 106.7 90 55.6
MD02G1135800 Malus domestica HOM05D001544 ORTHO05D005712 4.5e-21 105.1 101 50.5
MBI14_g19737_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 1.3e-20 103.6 71 67.6
Os09g0530700 Oryza sativa ssp. japonica HOM05D001544 ORTHO05D005712 1.3e-20 103.6 100 48.0
CDE12G0819 Ceratophyllum demersum HOM05D001544 ORTHO05D002732 2.9e-20 102.4 80 61.2
Zm00001eb103400 Zea mays HOM05D001544 ORTHO05D005712 4.2e-19 98.6 99 46.5
Mapoly0074s0044 Marchantia polymorpha HOM05D001544 ORTHO05D005712 2.3e-17 92.8 91 47.3
THA.LOC104826761 Tarenaya hassleriana HOM05D001544 ORTHO05D005712 2.3e-17 92.8 94 44.7
FAN23G2664 Fragaria x ananassa HOM05D001544 ORTHO05D005712 3.0e-17 92.4 101 49.5
Rhsim08G0035500 Rhododendron simsii HOM05D001544 ORTHO05D005712 3.0e-17 92.4 65 61.5
FAN23G1654 Fragaria x ananassa HOM05D002906 ORTHO05D003211 4.0e-17 92.0 97 48.5
FAN26G2191 Fragaria x ananassa HOM05D001544 ORTHO05D005712 4.0e-17 92.0 97 48.5
FAN28G0278 Fragaria x ananassa HOM05D001544 ORTHO05D005712 4.0e-17 92.0 97 48.5
FvH4_1g12190 Fragaria vesca HOM05D001544 ORTHO05D005712 1.2e-16 90.5 97 47.4
Gorai.007G197500 Gossypium raimondii HOM05D001544 ORTHO05D005712 5.7e-16 88.2 91 44.0
Gohir.D11G185900 Gossypium hirsutum HOM05D001544 ORTHO05D005712 7.5e-16 87.8 92 43.5
MBI14_g19731_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 2.8e-15 85.9 89 52.8
AagrBONN_evm.TU.Sc2ySwM_362.490 Anthoceros agrestis HOM05D001544 ORTHO05D005712 4.9e-15 85.1 96 40.6
TAR381G0232 Trochodendron aralioides HOM05D001544 ORTHO05D005712 6.3e-15 84.7 60 65.0
SMO361G0705 Selaginella moellendorffii HOM05D001544 ORTHO05D005712 8.3e-15 84.3 90 46.7
Gohir.A11G178100 Gossypium hirsutum HOM05D001544 ORTHO05D005712 1.1e-14 84.0 87 43.7
SMO004G0024 Selaginella moellendorffii HOM05D001544 ORTHO05D005712 3.1e-14 82.4 92 43.5
Ca_19707_v3 Cicer arietinum L. HOM05D001544 ORTHO05D005712 2.0e-13 79.7 59 59.3
Pp3c3_3130 Physcomitrium patens HOM05D001544 ORTHO05D005712 1.7e-12 76.6 89 36.0
Sabra07G0013400 Salix brachista HOM05D001544 ORTHO05D005712 1.1e-11 73.9 181 30.9
Pp3c14_16330 Physcomitrium patens HOM05D001544 ORTHO05D005712 2.5e-11 72.8 95 40.0
Oeu037732.1 Olea europaea HOM05D001544 ORTHO05D005712 5.6e-11 71.6 50 64.0
Sabra05G0096400 Salix brachista HOM05D001544 ORTHO05D005712 1.6e-10 70.1 132 37.1
Pp3c26_11470 Physcomitrium patens HOM05D001544 ORTHO05D005712 2.1e-10 69.7 94 38.3
Cfa006938 Carpinus fangiana HOM05D001544 ORTHO05D005712 1.4e-09 67.0 53 56.6
CARHR160680 Cardamine hirsuta HOM05D001544 ORTHO05D005712 4.4e-08 62.0 93 37.6
Dinv42006 Davidia involucrata HOM05D001544 ORTHO05D002732 8.3e-07 57.8 94 38.3
CBR_g12214 Chara braunii HOM05D068249 ORTHO05D005712 1.9e-06 56.6 74 35.1


User provided reference genes

Program Settings