Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33585 Davidia involucrata HOM05D005163 ORTHO05D006462 6.6e-156 553.9 261 100.0
CSS0019296 Camellia sinensis var. sinensis HOM05D005163 ORTHO05D006462 4.6e-117 424.9 248 82.3
Manes.02G100000 Manihot esculenta HOM05D005163 ORTHO05D006462 1.3e-114 416.8 248 80.2
Hma1.2p1_0913F.1_g236050 Hydrangea macrophylla HOM05D005163 ORTHO05D006462 2.8e-114 415.6 248 81.0
GSVIVG01018847001 Vitis vinifera HOM05D005163 ORTHO05D006462 3.6e-114 415.2 248 80.2
Thecc.01G025400 Theobroma cacao HOM05D005163 ORTHO05D006462 6.9e-113 411.0 248 79.8
Gohir.D12G062000 Gossypium hirsutum HOM05D005163 ORTHO05D006462 1.2e-112 410.2 248 79.0
TAR376G0780 Trochodendron aralioides HOM05D005163 ORTHO05D006462 2.0e-112 409.5 248 77.4
Ciclev10025040m.g Citrus clementina HOM05D005163 ORTHO05D006462 3.4e-112 408.7 248 79.4
Gohir.A12G062100 Gossypium hirsutum HOM05D005163 ORTHO05D006462 4.4e-112 408.3 248 78.6
Atru.chr3.745 Acer truncatum HOM05D005163 ORTHO05D006462 7.6e-112 407.5 248 78.6
Haze_03825 Corylus avellana HOM05D005163 ORTHO05D006462 7.6e-112 407.5 248 79.0
Potri.005G118300 Populus trichocarpa HOM05D005163 ORTHO05D006462 9.9e-112 407.1 248 78.6
Cfa006924 Carpinus fangiana HOM05D005163 ORTHO05D006462 1.7e-111 406.4 248 78.6
Gorai.008G065200 Gossypium raimondii HOM05D005163 ORTHO05D006462 1.7e-111 406.4 248 78.2
Cc07_g10240 Coffea canephora HOM05D005163 ORTHO05D006462 4.9e-111 404.8 248 77.8
Lj2g0010053 Lotus japonicus HOM05D005163 ORTHO05D006462 4.9e-111 404.8 248 79.4
arahy.Tifrunner.gnm1.ann1.U2HICA Arachis hypogaea HOM05D005163 ORTHO05D006462 6.4e-111 404.4 248 78.6
arahy.Tifrunner.gnm1.ann1.U51VHD Arachis hypogaea HOM05D005163 ORTHO05D006462 6.4e-111 404.4 248 78.6
Sed0007947 Sechium edule HOM05D005163 ORTHO05D006462 1.1e-110 403.7 248 78.2
Aqoxy5G01510 Aquilegia oxysepala HOM05D005163 ORTHO05D006462 1.4e-110 403.3 248 77.4
ClCG01G020030 Citrullus lanatus HOM05D005163 ORTHO05D006462 1.4e-110 403.3 250 77.2
Psat2g156920 Pisum sativum HOM05D005163 ORTHO05D006462 1.4e-110 403.3 248 79.4
Ca_24882_v3 Cicer arietinum L. HOM05D005163 ORTHO05D006462 1.9e-110 402.9 248 79.8
Lj4C212G4 Lonicera japonica HOM05D005163 ORTHO05D006462 1.9e-110 402.9 248 80.2
Eucgr.J02388 Eucalyptus grandis HOM05D005163 ORTHO05D006462 4.2e-110 401.7 247 77.7
Lalb_Chr05g0212611 Lupinus albus HOM05D005163 ORTHO05D006462 5.4e-110 401.4 248 78.6
Potri.007G017600 Populus trichocarpa HOM05D005163 ORTHO05D006462 7.1e-110 401.0 248 76.6
Glyma.01G170600 Glycine max HOM05D005163 ORTHO05D006462 1.2e-109 400.2 248 79.0
QL06p034609 Quercus lobata HOM05D005163 ORTHO05D006462 7.9e-109 397.5 248 76.6
RcHm_v2.0_Chr2g0100261 Rosa chinensis HOM05D005163 ORTHO05D006462 1.0e-108 397.1 248 76.6
CsaV3_6G046790 Cucumis sativus L. HOM05D005163 ORTHO05D006462 1.3e-108 396.7 248 77.0
MELO3C007876.2 Cucumis melo HOM05D005163 ORTHO05D006462 1.7e-108 396.4 248 77.0
TPR.G2381 Trifolium pratense HOM05D005163 ORTHO05D006462 1.7e-108 396.4 248 77.8
Duzib187G1632 Durio zibethinus HOM05D005163 ORTHO05D006462 2.3e-108 396.0 248 76.2
Medtr5g021150 Medicago truncatula HOM05D005163 ORTHO05D006462 2.3e-108 396.0 248 77.8
TWI73G0422 Tripterygium wilfordii HOM05D005163 ORTHO05D006462 2.3e-108 396.0 248 75.8
HanXRQChr14g0441521 Helianthus annuus HOM05D005163 ORTHO05D006462 3.0e-108 395.6 248 76.2
Phvul.002G166800 Phaseolus vulgaris HOM05D005163 ORTHO05D006462 3.9e-108 395.2 248 77.8
Sabra07G0015000 Salix brachista HOM05D005163 ORTHO05D006462 3.9e-108 395.2 249 75.9
Nitab4.5_0000723g0040 Nicotiana tabacum HOM05D005163 ORTHO05D006462 6.6e-108 394.4 248 76.2
MD02G1137100 Malus domestica HOM05D005163 ORTHO05D006462 1.5e-107 393.3 248 75.4
SalBow8G4654 Salvia bowleyana HOM05D005163 ORTHO05D006462 1.5e-107 393.3 248 75.8
VMungo1215G3295 Vigna mungo HOM05D005163 ORTHO05D006462 1.5e-107 393.3 248 77.0
Ah.02g124830 Amaranthus hybridus HOM05D005163 ORTHO05D006462 1.9e-107 392.9 248 76.6
CiPaw.07G054500 Carya illinoinensis HOM05D005163 ORTHO05D006462 9.6e-107 390.6 248 75.4
Gohir.A11G178900 Gossypium hirsutum HOM05D005163 ORTHO05D006462 1.3e-106 390.2 248 75.4
PGR102G2820 Punica granatum HOM05D005163 ORTHO05D006462 1.3e-106 390.2 249 75.1
Sed0022975 Sechium edule HOM05D005163 ORTHO05D006462 1.3e-106 390.2 248 75.4
Nitab4.5_0007070g0020 Nicotiana tabacum HOM05D005163 ORTHO05D006462 2.8e-106 389.0 248 75.8
MSTRG.23270 Avicennia marina HOM05D005163 ORTHO05D006462 1.1e-105 387.1 248 73.8
Migut.H02494 Erythranthe guttata HOM05D005163 ORTHO05D006462 1.1e-105 387.1 248 74.6
Peaxi162Scf00084g01221 Petunia axillaris HOM05D005163 ORTHO05D006462 1.1e-105 387.1 248 75.0
Oeu024029.1 Olea europaea HOM05D005163 ORTHO05D006462 1.4e-105 386.7 249 75.9
Gorai.007G198300 Gossypium raimondii HOM05D005163 ORTHO05D006462 1.8e-105 386.3 248 75.0
HanXRQChr07g0191281 Helianthus annuus HOM05D005163 ORTHO05D006462 1.8e-105 386.3 250 75.2
Lalb_Chr16g0377681 Lupinus albus HOM05D005163 ORTHO05D006462 3.1e-105 385.6 248 76.2
Sc03g0003300 Simmondsia chinensis HOM05D005163 ORTHO05D006462 4.0e-105 385.2 248 74.6
Lsat_1_v5_gn_2_78240 Lactuca sativa HOM05D005163 ORTHO05D006462 5.3e-105 384.8 248 73.0
ECA238G0541 Erigeron canadensis HOM05D005163 ORTHO05D006462 1.2e-104 383.6 248 73.8
FvH4_1g12400 Fragaria vesca HOM05D005163 ORTHO05D006462 1.2e-104 383.6 248 73.8
MD15G1250800 Malus domestica HOM05D005163 ORTHO05D006462 1.2e-104 383.6 248 74.2
Glyma.11G072700 Glycine max HOM05D005163 ORTHO05D006462 2.0e-104 382.9 248 75.4
Hund16465 Selenicereus undatus HOM05D005163 ORTHO05D006462 4.5e-104 381.7 253 72.3
PGSC0003DMG400003539 Solanum tuberosum HOM05D005163 ORTHO05D006462 4.5e-104 381.7 248 75.0
CAN.G358.18 Capsicum annuum HOM05D005163 ORTHO05D006462 5.8e-104 381.3 248 73.0
Solyc02g084690.3 Solanum lycopersicum HOM05D005163 ORTHO05D006462 7.6e-104 380.9 248 74.6
Sopen02g029360 Solanum pennellii HOM05D005163 ORTHO05D006462 9.9e-104 380.6 248 74.6
Rhsim08G0123900 Rhododendron simsii HOM05D005163 ORTHO05D006462 2.2e-103 379.4 273 70.0
PSO541G1023 Papaver somniferum HOM05D005163 ORTHO05D006462 2.9e-103 379.0 249 73.9
AUR62007635 Chenopodium quinoa HOM05D005163 ORTHO05D006462 3.8e-103 378.6 263 71.1
Thhalv10010167m.g Eutrema salsugineum HOM05D005163 ORTHO05D006462 4.9e-103 378.3 248 72.2
PSO675G4614 Papaver somniferum HOM05D005163 ORTHO05D006462 1.9e-102 376.3 249 73.5
Aa31LG4G19160 Aethionema arabicum HOM05D005163 ORTHO05D006462 3.2e-102 375.6 248 73.0
Sp5g11160 Schrenkiella parvula HOM05D005163 ORTHO05D006462 4.2e-102 375.2 248 71.4
Carub.0005s1745 Capsella rubella HOM05D005163 ORTHO05D006462 2.1e-101 372.9 248 72.2
CARHR160630 Cardamine hirsuta HOM05D005163 ORTHO05D006462 2.1e-101 372.9 248 71.4
Dinv40040 Davidia involucrata HOM05D005163 ORTHO05D006462 2.1e-101 372.9 254 74.0
THA.LOC104826639 Tarenaya hassleriana HOM05D005163 ORTHO05D006462 2.1e-101 372.9 248 72.2
COL.COLO4_21984 Corchorus olitorius HOM05D005163 ORTHO05D006462 2.7e-101 372.5 298 63.4
A03p48100 Brassica napus HOM05D005163 ORTHO05D006462 2.3e-100 369.4 248 69.8
BcaC06g33060 Brassica carinata HOM05D005163 ORTHO05D006462 1.1e-99 367.1 249 69.9
C07p46120 Brassica napus HOM05D005163 ORTHO05D006462 4.3e-99 365.2 248 69.0
BolC7t45128H Brassica oleracea HOM05D005163 ORTHO05D006462 4.3e-99 365.2 248 69.0
AL5G31470 Arabidopsis lyrata HOM05D005163 ORTHO05D006462 5.6e-99 364.8 249 71.1
ATR0661G156 Amborella trichopoda HOM05D005163 ORTHO05D006462 8.1e-98 360.9 248 71.0
AT3G51050 Arabidopsis thaliana HOM05D005163 ORTHO05D006462 1.1e-97 360.5 249 70.3
Oeu005146.2 Olea europaea HOM05D005163 ORTHO05D006462 1.4e-97 360.1 302 61.9
SGA_v2.0_scaffold280G46851 Striga asiatica HOM05D005163 ORTHO05D006462 5.3e-97 358.2 248 70.2
Actinidia19230 Actinidia chinensis HOM05D005163 ORTHO05D006462 1.5e-96 356.7 248 72.6
CANSAT01G3091 Cannabis sativa HOM05D005163 ORTHO05D006462 5.8e-96 354.8 248 71.8
Prupe.7G163500 Prunus persica HOM05D005163 ORTHO05D006462 5.5e-94 348.2 216 78.2
AUR62004121 Chenopodium quinoa HOM05D005163 ORTHO05D006462 4.6e-93 345.1 246 70.3
Gohir.D11G186500 Gossypium hirsutum HOM05D005163 ORTHO05D006462 1.5e-91 340.1 248 69.0
HPP92_021000 Vanilla planifolia HOM05D005163 ORTHO05D006462 7.4e-91 337.8 245 68.2
FAN28G1722 Fragaria x ananassa HOM05D005163 ORTHO05D006462 6.3e-90 334.7 248 66.9
Os02g0100700 Oryza sativa ssp. japonica HOM05D005163 ORTHO05D006462 6.3e-90 334.7 245 67.8
Nn5g29168 Nelumbo nucifera HOM05D005163 ORTHO05D006462 1.1e-89 334.0 248 66.5
FAN23G1678 Fragaria x ananassa HOM05D005163 ORTHO05D006462 1.4e-89 333.6 248 66.5
FAN19G3097 Fragaria x ananassa HOM05D005163 ORTHO05D006462 1.8e-89 333.2 248 66.9
CDE04G3147 Ceratophyllum demersum HOM05D005163 ORTHO05D006462 2.6e-88 329.3 250 65.6
EL10As8g23870 Beta vulgaris HOM05D005163 ORTHO05D006462 1.9e-86 323.2 248 65.7
Actinidia26108 Actinidia chinensis HOM05D005163 ORTHO05D006462 2.5e-86 322.8 248 66.9
Sabra05G0097300 Salix brachista HOM05D005163 ORTHO05D006462 3.2e-86 322.4 230 70.4
Zm00001eb228990 Zea mays HOM05D005163 ORTHO05D006462 6.7e-84 314.7 245 64.1
Cpa.g.sc6.195 Carica papaya HOM05D005163 ORTHO05D006462 3.3e-83 312.4 231 67.1
Duzib147G0248 Durio zibethinus HOM05D005163 ORTHO05D006462 2.8e-82 309.3 248 64.1
vmacro17732 Vaccinium macrocarpon HOM05D005163 ORTHO05D006462 2.2e-79 299.7 215 72.1
DCAR_031672 Daucus carota HOM05D005163 ORTHO05D006462 3.6e-77 292.4 248 62.9
Pp3c2_37540 Physcomitrium patens HOM05D005163 ORTHO05D006462 2.8e-66 256.1 253 52.6
Mapoly0159s0016 Marchantia polymorpha HOM05D005163 ORTHO05D006462 4.8e-66 255.4 253 53.8
SMO340G0175 Selaginella moellendorffii HOM05D005163 ORTHO05D006462 5.3e-65 251.9 249 51.0
Pp3c2_36750 Physcomitrium patens HOM05D005163 ORTHO05D006462 2.6e-64 249.6 253 50.6
Pp3c2_36751 Physcomitrium patens HOM05D005163 ORTHO05D006462 2.6e-64 249.6 253 50.6
Pp3c11_13530 Physcomitrium patens HOM05D005163 ORTHO05D006462 5.2e-60 235.3 253 49.4
AagrBONN_evm.TU.Sc2ySwM_368.2341 Anthoceros agrestis HOM05D005163 ORTHO05D006462 1.5e-54 217.2 250 49.2
FAN26G0993 Fragaria x ananassa HOM05D005163 ORTHO05D006462 9.4e-54 214.5 133 75.9
unitig_699.g19557 Utricularia gibba HOM05D005163 ORTHO05D006462 2.1e-53 213.4 183 59.6
C08p26360 Brassica napus HOM05D005163 ORTHO05D006462 8.8e-44 181.4 249 44.2
CBR_g41477 Chara braunii HOM05D005163 ORTHO05D006462 1.3e-39 167.5 253 41.1
MCO09G435 Micromonas commoda HOM05D005163 ORTHO05D006462 8.6e-31 138.3 238 36.6
BcaC07g39583 Brassica carinata HOM05D005163 ORTHO05D006462 1.9e-30 137.1 138 51.4
Hund14017 Selenicereus undatus HOM05D005163 ORTHO05D006462 1.6e-24 117.5 78 70.5
Cre07.g336050 Chlamydomonas reinhardtii HOM05D005163 ORTHO05D006462 5.2e-20 102.4 288 29.5
BraA09t39874Z Brassica rapa HOM05D005163 ORTHO05D006462 5.8e-19 99.0 58 72.4
SHI08598 Sapria himalayana HOM05D005163 ORTHO05D006462 6.4e-18 95.5 84 59.5
PRCOL_00007058 Prasinoderma coloniale HOM05D005163 ORTHO05D006462 3.0e-15 86.7 245 31.8
MBI01_g27921_MAGBIO Magnolia biondii HOM05D005163 ORTHO05D006462 1.7e-10 70.9 150 32.0


User provided reference genes

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