Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33459 Davidia involucrata HOM05D005182 ORTHO05D006631 1.5e-62 242.7 120 100.0
Cpa.g.c28071.2 Carica papaya HOM05D005182 ORTHO05D006631 1.5e-09 66.6 33 87.9
Actinidia06755 Actinidia chinensis HOM05D005182 ORTHO05D006631 2.5e-09 65.9 33 87.9
DCAR_011246 Daucus carota HOM05D005182 ORTHO05D006631 2.5e-09 65.9 33 87.9
COL.COLO4_29086 Corchorus olitorius HOM05D005182 ORTHO05D006631 3.3e-09 65.5 43 65.1
Lj2g0004707 Lotus japonicus HOM05D005182 ORTHO05D006631 4.2e-09 65.1 43 65.1
arahy.Tifrunner.gnm1.ann1.1JMX4I Arachis hypogaea HOM05D005182 ORTHO05D006631 5.5e-09 64.7 33 81.8
Duzib187G0244 Durio zibethinus HOM05D005182 ORTHO05D006631 5.5e-09 64.7 40 72.5
Gohir.A07G222400 Gossypium hirsutum HOM05D005182 ORTHO05D006631 5.5e-09 64.7 33 84.8
Gohir.D07G229100 Gossypium hirsutum HOM05D005182 ORTHO05D006631 5.5e-09 64.7 33 84.8
Gorai.001G264200 Gossypium raimondii HOM05D005182 ORTHO05D006631 5.5e-09 64.7 33 84.8
Phvul.004G010800 Phaseolus vulgaris HOM05D005182 ORTHO05D006631 7.2e-09 64.3 33 81.8
Thecc.04G015200 Theobroma cacao HOM05D005182 ORTHO05D006631 7.2e-09 64.3 33 81.8
Dinv35097 Davidia involucrata HOM05D005182 ORTHO05D006631 9.5e-09 63.9 33 87.9
Glyma.05G004900 Glycine max HOM05D005182 ORTHO05D006631 9.5e-09 63.9 33 81.8
Atru.chr6.2358 Acer truncatum HOM05D005182 ORTHO05D006631 1.2e-08 63.5 33 81.8
Aa31LG10G4000 Aethionema arabicum HOM05D005182 ORTHO05D006631 1.2e-08 63.5 33 81.8
arahy.Tifrunner.gnm1.ann1.C5A6Z1 Arachis hypogaea HOM05D005182 ORTHO05D006631 1.2e-08 63.5 33 78.8
Aqoxy3G02839 Aquilegia oxysepala HOM05D005182 ORTHO05D006631 1.6e-08 63.2 33 81.8
BcaC01g01215 Brassica carinata HOM05D005182 ORTHO05D006631 1.6e-08 63.2 42 69.0
A08p03300 Brassica napus HOM05D005182 ORTHO05D006631 1.6e-08 63.2 42 69.0
C03p89510 Brassica napus HOM05D005182 ORTHO05D006631 1.6e-08 63.2 42 69.0
BolC3t21265H Brassica oleracea HOM05D005182 ORTHO05D006631 1.6e-08 63.2 42 69.0
BraA08t32363Z Brassica rapa HOM05D005182 ORTHO05D006631 1.6e-08 63.2 42 69.0
Haze_14718 Corylus avellana HOM05D005182 ORTHO05D006631 1.6e-08 63.2 33 81.8
QL02p075210 Quercus lobata HOM05D005182 ORTHO05D006631 1.6e-08 63.2 33 78.8
QL09p000526 Quercus lobata HOM05D005182 ORTHO05D006631 1.6e-08 63.2 33 78.8
Sp1g37040 Schrenkiella parvula HOM05D005182 ORTHO05D006631 1.6e-08 63.2 42 69.0
SGA_v2.0_scaffold481G52321 Striga asiatica HOM05D005182 ORTHO05D006631 1.6e-08 63.2 33 81.8
TAR629G2348 Trochodendron aralioides HOM05D005182 ORTHO05D006631 1.6e-08 63.2 33 84.8
VMungo0464G0237 Vigna mungo HOM05D005182 ORTHO05D006631 1.6e-08 63.2 33 78.8
CiPaw.02G035100 Carya illinoinensis HOM05D005182 ORTHO05D006631 2.1e-08 62.8 33 81.8
CiPaw.02G035200 Carya illinoinensis HOM05D005182 ORTHO05D006631 2.1e-08 62.8 33 81.8
CiPaw.03G042000 Carya illinoinensis HOM05D005182 ORTHO05D006631 2.1e-08 62.8 33 81.8
Hma1.2p1_1291F.1_g273570 Hydrangea macrophylla HOM05D005182 ORTHO05D006631 2.1e-08 62.8 32 87.5
AL1G57790 Arabidopsis lyrata HOM05D005182 ORTHO05D006631 2.8e-08 62.4 42 69.0
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 2.8e-08 62.4 33 81.8
Carub.0001s3930 Capsella rubella HOM05D005182 ORTHO05D006631 2.8e-08 62.4 42 69.0
Eucgr.J02232 Eucalyptus grandis HOM05D005182 ORTHO05D006631 2.8e-08 62.4 33 84.8
Manes.17G115200 Manihot esculenta HOM05D005182 ORTHO05D006631 2.8e-08 62.4 33 81.8
Oeu057055.1 Olea europaea HOM05D005182 ORTHO05D006631 2.8e-08 62.4 33 78.8
PGR024G0002 Punica granatum HOM05D005182 ORTHO05D006631 2.8e-08 62.4 44 59.1
PGR142G3360 Punica granatum HOM05D005182 ORTHO05D006631 2.8e-08 62.4 44 59.1
CANSAT64G2419 Cannabis sativa HOM05D005182 ORTHO05D006631 3.6e-08 62.0 33 81.8
Cfa007391 Carpinus fangiana HOM05D005182 ORTHO05D006631 3.6e-08 62.0 33 78.8
Solyc02g086560.3 Solanum lycopersicum HOM05D005182 ORTHO05D006631 3.6e-08 62.0 33 78.8
Sopen02g031300 Solanum pennellii HOM05D005182 ORTHO05D006631 3.6e-08 62.0 33 78.8
CARHR040200 Cardamine hirsuta HOM05D005182 ORTHO05D006631 4.7e-08 61.6 33 78.8
Ca_04172_v3 Cicer arietinum L. HOM05D005182 ORTHO05D006631 4.7e-08 61.6 33 78.8
Nitab4.5_0002682g0020 Nicotiana tabacum HOM05D005182 ORTHO05D006631 4.7e-08 61.6 33 78.8
ATR0661G518 Amborella trichopoda HOM05D005182 ORTHO05D006631 6.1e-08 61.2 33 75.8
Cfa007386 Carpinus fangiana HOM05D005182 ORTHO05D006631 6.1e-08 61.2 33 78.8
Medtr6g005390 Medicago truncatula HOM05D005182 ORTHO05D006631 6.1e-08 61.2 33 78.8
Nitab4.5_0005432g0010 Nicotiana tabacum HOM05D005182 ORTHO05D006631 6.1e-08 61.2 33 75.8
TPR.G14069 Trifolium pratense HOM05D005182 ORTHO05D006631 6.1e-08 61.2 33 78.8
vmacro04855 Vaccinium macrocarpon HOM05D005182 ORTHO05D006631 6.1e-08 61.2 30 90.0
Zm00001eb072570 Zea mays HOM05D005182 ORTHO05D006631 6.1e-08 61.2 49 59.2
CAN.G1799.12 Capsicum annuum HOM05D005182 ORTHO05D006631 8.0e-08 60.8 33 72.7
Peaxi162Scf00129g01422 Petunia axillaris HOM05D005182 ORTHO05D006631 8.0e-08 60.8 33 72.7
Peaxi162Scf00304g01217 Petunia axillaris HOM05D005182 ORTHO05D006631 8.0e-08 60.8 33 72.7
SalBow1G7073 Salvia bowleyana HOM05D005182 ORTHO05D006631 8.0e-08 60.8 33 78.8
CDE06G0683 Ceratophyllum demersum HOM05D005182 ORTHO05D006631 1.0e-07 60.5 33 81.8
Ciclev10016757m.g Citrus clementina HOM05D005182 ORTHO05D006631 1.0e-07 60.5 33 78.8
HanXRQChr17g0548351 Helianthus annuus HOM05D005182 ORTHO05D006631 1.0e-07 60.5 33 78.8
MBI16_g14596_MAGBIO Magnolia biondii HOM05D005182 ORTHO05D006631 1.0e-07 60.5 33 78.8
Sabra01G0148000 Salix brachista HOM05D005182 ORTHO05D006631 1.0e-07 60.5 33 78.8
TWI12G0687 Tripterygium wilfordii HOM05D005182 ORTHO05D006631 1.0e-07 60.5 33 75.8
Migut.H00088 Erythranthe guttata HOM05D005182 ORTHO05D006631 1.4e-07 60.1 33 75.8
AT1G50170 Arabidopsis thaliana HOM05D005182 ORTHO05D006631 1.8e-07 59.7 42 66.7
MD09G1028700 Malus domestica HOM05D005182 ORTHO05D006631 1.8e-07 59.7 33 72.7
Nn3g16771 Nelumbo nucifera HOM05D005182 ORTHO05D006631 1.8e-07 59.7 33 75.8
Psat1g190920 Pisum sativum HOM05D005182 ORTHO05D006631 1.8e-07 59.7 33 75.8
RcHm_v2.0_Chr1g0351301 Rosa chinensis HOM05D005182 ORTHO05D006631 1.8e-07 59.7 39 66.7
PGSC0003DMG400000477 Solanum tuberosum HOM05D005182 ORTHO05D006631 1.8e-07 59.7 33 75.8
THA.LOC104801894 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 1.8e-07 59.7 33 75.8
THA.LOC104807109 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 1.8e-07 59.7 33 75.8
Cpa.g.c30633.2 Carica papaya HOM05D005182 ORTHO05D006631 2.3e-07 59.3 33 75.8
ECA246G2600 Erigeron canadensis HOM05D005182 ORTHO05D006631 2.3e-07 59.3 33 75.8
Thhalv10011756m.g Eutrema salsugineum HOM05D005182 ORTHO05D006631 2.3e-07 59.3 33 75.8
Potri.001G178800 Populus trichocarpa HOM05D005182 ORTHO05D006631 3.0e-07 58.9 33 72.7
Prupe.3G289500 Prunus persica HOM05D005182 ORTHO05D006631 3.0e-07 58.9 33 69.7
GSVIVG01032428001 Vitis vinifera HOM05D005182 ORTHO05D006631 3.0e-07 58.9 31 80.6
MELO3C021568.2 Cucumis melo HOM05D005182 ORTHO05D006631 5.2e-07 58.2 33 78.8
FvH4_3g28470 Fragaria vesca HOM05D005182 ORTHO05D006631 5.2e-07 58.2 31 77.4
FAN11G2673 Fragaria x ananassa HOM05D005182 ORTHO05D006631 5.2e-07 58.2 31 77.4
FAN21G0797 Fragaria x ananassa HOM05D005182 ORTHO05D006631 5.2e-07 58.2 31 77.4
RcHm_v2.0_Chr2g0173081 Rosa chinensis HOM05D005182 ORTHO05D006631 5.2e-07 58.2 31 77.4
RcHm_v2.0_Chr7g0219921 Rosa chinensis HOM05D005182 ORTHO05D006631 5.2e-07 58.2 31 77.4
Sed0010591 Sechium edule HOM05D005182 ORTHO05D006631 5.2e-07 58.2 33 78.8
Sed0025592 Sechium edule HOM05D005182 ORTHO05D006631 5.2e-07 58.2 33 78.8
EL10Ac2g02464 Beta vulgaris HOM05D005182 ORTHO05D006631 6.8e-07 57.8 33 72.7
AUR62024784 Chenopodium quinoa HOM05D005182 ORTHO05D006631 6.8e-07 57.8 53 47.2
AUR62032437 Chenopodium quinoa HOM05D005182 ORTHO05D006631 6.8e-07 57.8 53 47.2
Cc07_g01870 Coffea canephora HOM05D005182 ORTHO05D006631 6.8e-07 57.8 33 69.7
Os02g0296800 Oryza sativa ssp. japonica HOM05D005182 ORTHO05D006631 6.8e-07 57.8 49 55.1
ClCG00G002150 Citrullus lanatus HOM05D005182 ORTHO05D006631 8.9e-07 57.4 30 83.3
ClCG09G019170 Citrullus lanatus HOM05D005182 ORTHO05D006631 8.9e-07 57.4 30 83.3
Ah.12g060430 Amaranthus hybridus HOM05D005182 ORTHO05D006631 2.0e-06 56.2 33 69.7
unitig_746.g26550 Utricularia gibba HOM05D005182 ORTHO05D006631 2.6e-06 55.8 33 72.7
MD17G1030300 Malus domestica HOM05D005182 ORTHO05D006631 3.4e-06 55.5 33 69.7
CsaV3_5G027220 Cucumis sativus L. HOM05D005182 ORTHO05D006631 4.4e-06 55.1 33 75.8
FvH4_6g51400 Fragaria vesca HOM05D005182 ORTHO05D006631 4.4e-06 55.1 31 71.0
FAN14G1378 Fragaria x ananassa HOM05D005182 ORTHO05D006631 4.4e-06 55.1 31 71.0
Hund04415 Selenicereus undatus HOM05D005182 ORTHO05D006631 4.4e-06 55.1 33 69.7


User provided reference genes

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