Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 6.5e-67 257.3 134 100.0
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 1.2e-57 226.5 134 88.8
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 1.7e-54 216.1 134 82.8
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 2.2e-54 215.7 134 83.6
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 1.4e-53 213.0 134 80.6
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 1.4e-53 213.0 134 82.1
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 3.1e-53 211.8 134 81.3
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 7.0e-53 210.7 134 79.9
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 7.0e-53 210.7 134 81.3
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 9.1e-53 210.3 134 81.3
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 9.1e-53 210.3 134 82.1
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 9.1e-53 210.3 128 83.6
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 1.6e-52 209.5 134 80.6
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 2.7e-52 208.8 133 81.2
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 2.7e-52 208.8 134 82.1
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 4.5e-52 208.0 134 82.8
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 7.7e-52 207.2 134 79.9
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 1.3e-51 206.5 134 81.3
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 1.3e-51 206.5 134 82.1
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 1.7e-51 206.1 134 81.3
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 2.2e-51 205.7 134 81.3
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 3.8e-51 204.9 134 79.9
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 3.8e-51 204.9 134 81.3
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 5.0e-51 204.5 134 78.4
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 6.5e-51 204.1 134 82.1
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 6.5e-51 204.1 134 82.1
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 6.5e-51 204.1 134 79.1
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 1.1e-50 203.4 134 79.9
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 1.1e-50 203.4 132 79.5
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 1.9e-50 202.6 134 75.4
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 1.9e-50 202.6 134 80.6
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 1.9e-50 202.6 134 79.9
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 3.2e-50 201.8 134 78.4
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 3.2e-50 201.8 134 79.1
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 7.2e-50 200.7 134 81.3
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 7.2e-50 200.7 134 77.6
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 7.2e-50 200.7 134 79.9
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 1.2e-49 199.9 134 78.4
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 1.2e-49 199.9 134 79.9
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 2.1e-49 199.1 134 76.1
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 2.1e-49 199.1 134 77.6
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 2.7e-49 198.7 134 76.1
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 3.6e-49 198.4 134 79.1
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 1.0e-48 196.8 134 77.6
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 1.0e-48 196.8 134 77.6
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.4e-48 196.4 134 76.9
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 1.8e-48 196.1 134 80.6
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 3.0e-48 195.3 135 77.8
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 3.0e-48 195.3 134 76.1
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 4.0e-48 194.9 134 76.9
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 5.2e-48 194.5 134 79.1
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.5e-47 193.0 138 79.0
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.5e-47 193.0 138 79.0
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 2.0e-47 192.6 138 79.0
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.0e-47 192.6 138 79.0
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.0e-47 192.6 138 79.0
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.0e-47 192.6 138 79.0
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 2.6e-47 192.2 134 73.1
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.4e-47 191.4 138 78.3
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 4.4e-47 191.4 134 76.9
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 4.4e-47 191.4 134 76.9
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 5.7e-47 191.0 135 76.3
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 7.5e-47 190.7 138 79.0
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 7.5e-47 190.7 138 79.0
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 7.5e-47 190.7 134 71.6
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 1.7e-46 189.5 134 76.1
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 1.7e-46 189.5 134 78.4
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 2.2e-46 189.1 134 74.6
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.2e-46 189.1 138 77.5
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 2.2e-46 189.1 134 72.4
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 2.2e-46 189.1 117 82.1
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 2.8e-46 188.7 134 72.4
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 6.3e-46 187.6 128 75.0
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 8.3e-46 187.2 136 74.3
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 8.3e-46 187.2 134 74.6
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 1.1e-45 186.8 125 77.6
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.1e-45 186.8 138 76.8
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 1.1e-45 186.8 134 71.6
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 1.1e-45 186.8 134 71.6
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 1.4e-45 186.4 134 75.4
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 1.4e-45 186.4 134 70.9
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 2.4e-45 185.7 113 80.5
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 4.1e-45 184.9 108 87.0
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 7.0e-45 184.1 134 70.9
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 3.5e-44 181.8 121 76.9
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 5.9e-44 181.0 120 76.7
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 5.9e-44 181.0 120 78.3
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 7.7e-44 180.6 126 76.2
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 1.0e-43 180.3 134 70.9
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 1.3e-43 179.9 134 73.1
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 3.8e-43 178.3 122 75.4
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 3.8e-43 178.3 134 68.7
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 8.6e-43 177.2 121 75.2
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 8.6e-43 177.2 138 71.0
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 8.6e-43 177.2 107 84.1
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.5e-42 176.4 124 75.0
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 1.9e-42 176.0 136 69.9
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 2.5e-42 175.6 120 76.7
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 2.5e-42 175.6 120 76.7
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 2.5e-42 175.6 120 76.7
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 2.5e-42 175.6 120 76.7
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 2.5e-42 175.6 110 80.0
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 3.3e-42 175.3 134 70.1
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 3.3e-42 175.3 125 72.0
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 7.2e-42 174.1 121 74.4
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 2.8e-41 172.2 134 69.4
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 3.6e-41 171.8 134 70.9
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 6.1e-41 171.0 134 69.4
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 5.2e-40 167.9 120 71.7
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 6.8e-40 167.5 134 64.9
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 2.0e-39 166.0 133 66.9
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 3.4e-39 165.2 134 63.4
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 5.7e-39 164.5 132 67.4
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 8.3e-38 160.6 134 67.2
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 7.0e-37 157.5 114 72.8
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 2.7e-36 155.6 100 77.0
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 4.6e-36 154.8 123 69.1
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 1.0e-35 153.7 118 71.2
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.0e-35 153.7 116 69.8
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.3e-35 153.3 126 69.8
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.3e-35 152.5 115 69.6
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 1.9e-34 149.4 134 59.0
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 7.3e-34 147.5 134 61.2
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 1.2e-33 146.7 120 70.8
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 3.4e-31 138.7 91 76.9
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 1.4e-29 133.3 119 59.7
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.3e-27 126.7 93 69.9
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 1.2e-23 113.6 116 58.6
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.4e-23 112.1 57 93.0
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 1.2e-20 103.6 92 55.4
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 2.1e-20 102.8 105 50.5
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 2.3e-19 99.4 106 50.0
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 5.1e-19 98.2 110 49.1
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 3.3e-18 95.5 90 51.1
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.0e-15 86.3 91 54.9
Dinv25304 Davidia involucrata HOM05D000009 ORTHO05D000008 2.0e-15 86.3 54 90.7
Actinidia36173 Actinidia chinensis HOM05D005499 ORTHO05D006666 2.2e-14 82.8 82 65.9
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 5.4e-13 78.2 88 52.3
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 3.5e-12 75.5 106 43.4
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 4.3e-10 68.6 120 35.8
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 4.0e-08 62.0 68 55.9
PRCOL_00001894 Prasinoderma coloniale HOM05D005499 ORTHO05D006666 2.9e-06 55.8 85 35.3


User provided reference genes

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