Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33354 Davidia involucrata HOM05D000135 ORTHO05D000816 1.4e-66 256.5 163 100.0
Oeu011957.1 Olea europaea HOM05D000135 ORTHO05D000816 3.4e-17 92.4 110 51.8
Lj7C609T6 Lonicera japonica HOM05D000135 ORTHO05D000816 6.4e-16 88.2 106 60.4
CiPaw.03G053600 Carya illinoinensis HOM05D000135 ORTHO05D000816 1.1e-15 87.4 108 49.1
Hma1.2p1_1219F.1_g267940 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 1.1e-15 87.4 120 43.3
CSS0033756 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000816 1.9e-15 86.7 105 48.6
FAN14G0778 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.9e-15 86.7 107 46.7
FvH4_6g53150 Fragaria vesca HOM05D000135 ORTHO05D000816 3.2e-15 85.9 107 46.7
Potri.001G332900 Populus trichocarpa HOM05D000135 ORTHO05D000816 4.1e-15 85.5 108 46.3
Atru.chr6.2532 Acer truncatum HOM05D000135 ORTHO05D000816 1.6e-14 83.6 108 46.3
Hma1.2p1_1219F.1_g267950 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 2.0e-14 83.2 108 45.4
Medtr6g023460 Medicago truncatula HOM05D000135 ORTHO05D000816 2.0e-14 83.2 108 44.4
Hma1.2p1_1219F.1_g267970 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 3.5e-14 82.4 52 75.0
Hma1.2p1_2105F.1_g314145 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 3.5e-14 82.4 52 75.0
RcHm_v2.0_Chr2g0175201 Rosa chinensis HOM05D000135 ORTHO05D000816 3.5e-14 82.4 107 45.8
PGR083G0560 Punica granatum HOM05D000135 ORTHO05D000816 6.0e-14 81.6 103 44.7
MD17G1014200 Malus domestica HOM05D000135 ORTHO05D000816 7.8e-14 81.3 119 42.9
Actinidia05909 Actinidia chinensis HOM05D000135 ORTHO05D000816 1.0e-13 80.9 108 42.6
FAN02G0421 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.3e-13 80.5 107 44.9
Lsat_1_v5_gn_4_185301 Lactuca sativa HOM05D000135 ORTHO05D000816 2.3e-13 79.7 108 42.6
Manes.15G159100 Manihot esculenta HOM05D000135 ORTHO05D000816 3.0e-13 79.3 106 44.3
MD09G1013600 Malus domestica HOM05D000135 ORTHO05D000816 3.9e-13 79.0 119 42.0
Phvul.004G055200 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 3.9e-13 79.0 108 46.3
ECA232G4862 Erigeron canadensis HOM05D000135 ORTHO05D000816 6.6e-13 78.2 111 62.2
Rhsim08G0044100 Rhododendron simsii HOM05D000135 ORTHO05D000816 8.6e-13 77.8 109 43.1
Oeu035216.1 Olea europaea HOM05D000135 ORTHO05D000816 1.1e-12 77.4 52 67.3
SalBow1G7946 Salvia bowleyana HOM05D000135 ORTHO05D000816 1.9e-12 76.6 107 66.4
Cc07_g00660 Coffea canephora HOM05D000135 ORTHO05D000816 2.5e-12 76.3 50 74.0
Phvul.001G095600 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 2.5e-12 76.3 107 43.9
Prupe.3G303600 Prunus persica HOM05D000135 ORTHO05D000816 2.5e-12 76.3 110 45.5
MSTRG.3087 Avicennia marina HOM05D000135 ORTHO05D000816 3.3e-12 75.9 108 42.6
Manes.17G104400 Manihot esculenta HOM05D000135 ORTHO05D000816 3.3e-12 75.9 106 70.8
Sabra16G0213700 Salix brachista HOM05D000135 ORTHO05D000816 3.3e-12 75.9 107 42.1
Duzib147G0709 Durio zibethinus HOM05D000135 ORTHO05D000816 4.3e-12 75.5 53 67.9
Gohir.A05G339500 Gossypium hirsutum HOM05D000135 ORTHO05D000816 4.3e-12 75.5 51 68.6
Oeu058772.1 Olea europaea HOM05D000135 ORTHO05D000816 7.3e-12 74.7 113 44.2
Lsat_1_v5_gn_9_1180 Lactuca sativa HOM05D000135 ORTHO05D000816 9.5e-12 74.3 108 39.8
VMungo0464G1988 Vigna mungo HOM05D000135 ORTHO05D000816 9.5e-12 74.3 108 40.7
Gohir.D04G078000 Gossypium hirsutum HOM05D000135 ORTHO05D000816 1.6e-11 73.6 51 68.6
Gorai.012G087800 Gossypium raimondii HOM05D000135 ORTHO05D000816 1.6e-11 73.6 51 68.6
Peaxi162Scf00700g00017 Petunia axillaris HOM05D000135 ORTHO05D000816 2.1e-11 73.2 107 38.3
Eucgr.J02318 Eucalyptus grandis HOM05D000135 ORTHO05D000816 2.8e-11 72.8 108 40.7
Sabra16G0213800 Salix brachista HOM05D000135 ORTHO05D000816 2.8e-11 72.8 107 41.1
Oeu035215.1 Olea europaea HOM05D000135 ORTHO05D000816 3.6e-11 72.4 107 40.2
SalBow7G1515 Salvia bowleyana HOM05D000135 ORTHO05D000816 4.7e-11 72.0 50 66.0
Psat3g176000 Pisum sativum HOM05D000135 ORTHO05D000816 8.0e-11 71.2 109 40.4
CANSAT64G0052 Cannabis sativa HOM05D000135 ORTHO05D000816 1.1e-10 70.9 108 41.7
Cpa.g.sc171.33 Carica papaya HOM05D000135 ORTHO05D000816 1.1e-10 70.9 115 40.9
COL.COLO4_17166 Corchorus olitorius HOM05D000135 ORTHO05D000816 1.1e-10 70.9 47 70.2
Glyma.19G088200 Glycine max HOM05D000135 ORTHO05D000816 1.1e-10 70.9 51 70.6
Rhsim10G0007900 Rhododendron simsii HOM05D000135 ORTHO05D000816 1.1e-10 70.9 114 38.6
SalBow1G2517 Salvia bowleyana HOM05D016915 ORTHO05D000816 1.1e-10 70.9 50 66.0
SalBow7G4752 Salvia bowleyana HOM05D016915 ORTHO05D000816 1.1e-10 70.9 50 66.0
Cfa021347 Carpinus fangiana HOM05D000135 ORTHO05D000816 1.4e-10 70.5 49 71.4
Ciclev10018267m.g Citrus clementina HOM05D000135 ORTHO05D000816 1.4e-10 70.5 45 75.6
HanXRQChr15g0486921 Helianthus annuus HOM05D000135 ORTHO05D000816 1.4e-10 70.5 108 46.3
Psat1g085520 Pisum sativum HOM05D000135 ORTHO05D000816 1.4e-10 70.5 108 40.7
Thecc.04G033300 Theobroma cacao HOM05D000135 ORTHO05D000816 1.8e-10 70.1 52 63.5
Haze_14848 Corylus avellana HOM05D000135 ORTHO05D000816 2.3e-10 69.7 51 66.7
Lju41C51T3 Lonicera japonica HOM05D000135 ORTHO05D000816 2.3e-10 69.7 48 70.8
Eucgr.B00127 Eucalyptus grandis HOM05D000135 ORTHO05D000816 3.1e-10 69.3 108 38.0
VMungo1383G0529 Vigna mungo HOM05D000135 ORTHO05D000816 3.1e-10 69.3 53 62.3
CAN.G473.85 Capsicum annuum HOM05D000135 ORTHO05D000816 4.0e-10 68.9 107 38.3
SalBow1G3513 Salvia bowleyana HOM05D016915 ORTHO05D000816 4.0e-10 68.9 50 62.0
DCAR_015089 Daucus carota HOM05D000135 ORTHO05D000816 5.2e-10 68.6 47 70.2
Lalb_Chr22g0360481 Lupinus albus HOM05D000135 ORTHO05D000816 5.2e-10 68.6 107 40.2
Rhsim10G0007700 Rhododendron simsii HOM05D000135 ORTHO05D000816 6.8e-10 68.2 51 60.8
SalBow7G4318 Salvia bowleyana HOM05D016915 ORTHO05D000816 6.8e-10 68.2 49 63.3
TPR.G39344 Trifolium pratense HOM05D000135 ORTHO05D000816 6.8e-10 68.2 53 62.3
TAR629G1517 Trochodendron aralioides HOM05D000135 ORTHO05D000816 6.8e-10 68.2 107 46.7
Migut.K01452 Erythranthe guttata HOM05D016915 ORTHO05D000816 8.9e-10 67.8 50 62.0
TWI12G0256 Tripterygium wilfordii HOM05D000135 ORTHO05D000816 1.2e-09 67.4 51 62.7
Ca_28119_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 1.5e-09 67.0 52 63.5
Migut.K01451 Erythranthe guttata HOM05D000135 ORTHO05D000816 1.5e-09 67.0 51 58.8
HanXRQChr15g0474941 Helianthus annuus HOM05D000135 ORTHO05D000816 1.5e-09 67.0 108 38.9
Lj1g0014603 Lotus japonicus HOM05D000135 ORTHO05D000816 1.5e-09 67.0 112 41.1
Lalb_Chr14g0363211 Lupinus albus HOM05D000135 ORTHO05D000816 1.5e-09 67.0 52 63.5
MBI01_g09380_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 1.5e-09 67.0 102 40.2
QL02p071822 Quercus lobata HOM05D000135 ORTHO05D000816 1.5e-09 67.0 50 68.0
Rhsim10G0008000 Rhododendron simsii HOM05D000135 ORTHO05D000816 1.5e-09 67.0 112 38.4
Duzib264G0451 Durio zibethinus HOM05D000135 ORTHO05D000816 2.0e-09 66.6 47 66.0
Duzib264G0910 Durio zibethinus HOM05D000135 ORTHO05D000816 2.0e-09 66.6 47 66.0
Migut.K01450 Erythranthe guttata HOM05D000135 ORTHO05D000816 2.0e-09 66.6 50 60.0
Gorai.001G269500 Gossypium raimondii HOM05D000135 ORTHO05D000816 2.6e-09 66.2 102 41.2
Glyma.16G059300 Glycine max HOM05D000135 ORTHO05D000816 3.4e-09 65.9 51 64.7
Potri.005G259900 Populus trichocarpa HOM05D000135 ORTHO05D000816 4.4e-09 65.5 106 36.8
vmacro05944 Vaccinium macrocarpon HOM05D000135 ORTHO05D000816 4.4e-09 65.5 50 62.0
Rhsim10G0007800 Rhododendron simsii HOM05D000135 ORTHO05D000816 5.8e-09 65.1 51 58.8
vmacro05943 Vaccinium macrocarpon HOM05D000135 ORTHO05D000816 5.8e-09 65.1 50 62.0
MBI03_g33916_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 7.5e-09 64.7 101 39.6
Nitab4.5_0002887g0060 Nicotiana tabacum HOM05D000135 ORTHO05D000816 7.5e-09 64.7 107 37.4
Potri.002G001400 Populus trichocarpa HOM05D000135 ORTHO05D000816 9.8e-09 64.3 111 35.1
SGA_v2.0_scaffold47G17572 Striga asiatica HOM05D000135 ORTHO05D000816 9.8e-09 64.3 50 58.0
MBI02_g10682_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 1.3e-08 63.9 107 35.5
Peaxi162Scf00259g00126 Petunia axillaris HOM05D000135 ORTHO05D000816 1.7e-08 63.5 107 36.4
Sabra05G0201600 Salix brachista HOM05D000135 ORTHO05D000816 1.7e-08 63.5 106 36.8
GSVIVG01013467001 Vitis vinifera HOM05D000135 ORTHO05D000816 2.2e-08 63.2 103 39.8
FvH4_5g26790 Fragaria vesca HOM05D000135 ORTHO05D000816 2.9e-08 62.8 104 39.4
FAN08G1719 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.9e-08 62.8 104 39.4
FAN18G1887 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.9e-08 62.8 104 39.4
Peaxi162Scf00420g00047 Petunia axillaris HOM05D000135 ORTHO05D000816 2.9e-08 62.8 103 35.0
Sc07g0004160 Simmondsia chinensis HOM05D000135 ORTHO05D000816 2.9e-08 62.8 52 59.6
Migut.F00079 Erythranthe guttata HOM05D016915 ORTHO05D000816 3.7e-08 62.4 45 64.4
Nitab4.5_0002498g0070 Nicotiana tabacum HOM05D000135 ORTHO05D000816 3.7e-08 62.4 107 37.4
Dinv14818 Davidia involucrata HOM05D000135 ORTHO05D000816 4.9e-08 62.0 109 35.8
HanXRQChr09g0256101 Helianthus annuus HOM05D000135 ORTHO05D000816 4.9e-08 62.0 48 58.3
MD06G1143500 Malus domestica HOM05D000135 ORTHO05D000816 4.9e-08 62.0 107 34.6
Manes.05G113200 Manihot esculenta HOM05D000135 ORTHO05D000816 4.9e-08 62.0 104 40.4
SGA_v2.0_scaffold47G17571 Striga asiatica HOM05D000135 ORTHO05D000816 4.9e-08 62.0 49 57.1
FvH4_5g08060 Fragaria vesca HOM05D000135 ORTHO05D000816 6.4e-08 61.6 107 35.5
FAN04G2593 Fragaria x ananassa HOM05D000135 ORTHO05D000816 6.4e-08 61.6 107 35.5
FAN13G0461 Fragaria x ananassa HOM05D000135 ORTHO05D000816 6.4e-08 61.6 107 35.5
FAN18G3513 Fragaria x ananassa HOM05D000135 ORTHO05D000816 6.4e-08 61.6 107 35.5
Gohir.A07G226850 Gossypium hirsutum HOM05D000135 ORTHO05D000816 6.4e-08 61.6 103 39.8
Solyc11g071740.2 Solanum lycopersicum HOM05D000135 ORTHO05D000816 6.4e-08 61.6 102 38.2
Sopen11g029410 Solanum pennellii HOM05D000135 ORTHO05D000816 6.4e-08 61.6 102 38.2
PGSC0003DMG400040538 Solanum tuberosum HOM05D000135 ORTHO05D000816 6.4e-08 61.6 102 38.2
PGSC0003DMG400045603 Solanum tuberosum HOM05D000135 ORTHO05D000816 6.4e-08 61.6 102 38.2
Eucgr.B00125 Eucalyptus grandis HOM05D000135 ORTHO05D000816 8.3e-08 61.2 108 37.0
Peaxi162Scf00259g00018 Petunia axillaris HOM05D000135 ORTHO05D000816 8.3e-08 61.2 101 38.6
RcHm_v2.0_Chr7g0217701 Rosa chinensis HOM05D000135 ORTHO05D000816 8.3e-08 61.2 104 38.5
PGSC0003DMG400013427 Solanum tuberosum HOM05D000135 ORTHO05D000816 8.3e-08 61.2 103 39.8
Atru.chr13.16 Acer truncatum HOM05D000135 ORTHO05D000816 1.1e-07 60.8 46 65.2
Lj2C97T5 Lonicera japonica HOM05D000135 ORTHO05D000816 1.1e-07 60.8 100 56.0
MBI01_g44779_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 1.1e-07 60.8 107 34.6
QL02p016339 Quercus lobata HOM05D000135 ORTHO05D000816 1.1e-07 60.8 50 58.0
Nn4g22363 Nelumbo nucifera HOM05D000135 ORTHO05D000816 1.4e-07 60.5 109 40.4
Nn4g22368 Nelumbo nucifera HOM05D000135 ORTHO05D000816 1.4e-07 60.5 109 40.4
Nitab4.5_0007815g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 1.9e-07 60.1 103 37.9
TAR622G0710 Trochodendron aralioides HOM05D000135 ORTHO05D000816 1.9e-07 60.1 108 38.0
Eucgr.B00124 Eucalyptus grandis HOM05D000135 ORTHO05D000816 2.4e-07 59.7 108 36.1
TPR.G38330 Trifolium pratense HOM05D000135 ORTHO05D000816 2.4e-07 59.7 53 60.4
CiPaw.04G035100 Carya illinoinensis HOM05D000135 ORTHO05D000816 4.1e-07 58.9 89 40.4
CANSAT25G2687 Cannabis sativa HOM05D000135 ORTHO05D000816 5.4e-07 58.5 111 36.0
COL.COLO4_12261 Corchorus olitorius HOM05D000135 ORTHO05D000816 5.4e-07 58.5 105 37.1
ECA246G1426 Erigeron canadensis HOM05D000135 ORTHO05D000816 5.4e-07 58.5 94 39.4
FAN08G0825 Fragaria x ananassa HOM05D000135 ORTHO05D000816 5.4e-07 58.5 107 34.6
RcHm_v2.0_Chr7g0190421 Rosa chinensis HOM05D000135 ORTHO05D000816 5.4e-07 58.5 107 34.6
PGSC0003DMG400002993 Solanum tuberosum HOM05D000135 ORTHO05D000816 5.4e-07 58.5 102 36.3
DCAR_009849 Daucus carota HOM05D000135 ORTHO05D000816 7.1e-07 58.2 100 38.0
Eucgr.B00123 Eucalyptus grandis HOM05D000135 ORTHO05D000816 7.1e-07 58.2 108 36.1
QL02p016392 Quercus lobata HOM05D000135 ORTHO05D000816 7.1e-07 58.2 50 56.0
QL02p016429 Quercus lobata HOM05D000135 ORTHO05D000816 7.1e-07 58.2 50 54.0
unitig_748.g7057 Utricularia gibba HOM05D000135 ORTHO05D000816 7.1e-07 58.2 112 36.6
Nitab4.5_0002498g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 9.2e-07 57.8 47 55.3
Prupe.5G000600 Prunus persica HOM05D000135 ORTHO05D000816 9.2e-07 57.8 50 60.0
Cpa.g.sc36.91 Carica papaya HOM05D000135 ORTHO05D000816 1.2e-06 57.4 46 63.0
Nitab4.5_0002183g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000816 1.2e-06 57.4 102 38.2
QL02p016421 Quercus lobata HOM05D000135 ORTHO05D000816 1.2e-06 57.4 50 56.0
PGSC0003DMG400002994 Solanum tuberosum HOM05D000135 ORTHO05D000816 1.2e-06 57.4 110 34.5
CAN.G1463.22 Capsicum annuum HOM05D000135 ORTHO05D000816 1.6e-06 57.0 103 35.9
TAR628G0482 Trochodendron aralioides HOM05D000135 ORTHO05D000816 1.6e-06 57.0 111 34.2
GSVIVG01008516001 Vitis vinifera HOM05D000135 ORTHO05D000816 1.6e-06 57.0 110 40.9
ClCG06G017800 Citrullus lanatus HOM05D000135 ORTHO05D000816 2.1e-06 56.6 108 38.0
FAN04G2622 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.1e-06 56.6 46 58.7
FAN13G2467 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.1e-06 56.6 46 58.7
Prupe.5G152700 Prunus persica HOM05D000135 ORTHO05D000816 2.1e-06 56.6 107 33.6
Eucgr.B00128 Eucalyptus grandis HOM05D000135 ORTHO05D000816 2.7e-06 56.2 102 37.3
Nitab4.5_0000875g0030 Nicotiana tabacum HOM05D000135 ORTHO05D000816 2.7e-06 56.2 102 37.3
Solyc03g005040.1 Solanum lycopersicum HOM05D000135 ORTHO05D000816 2.7e-06 56.2 104 39.4
Solyc11g071760.3 Solanum lycopersicum HOM05D000135 ORTHO05D000816 2.7e-06 56.2 102 35.3
Sopen03g001050 Solanum pennellii HOM05D000135 ORTHO05D000816 2.7e-06 56.2 104 39.4
Sopen11g029420 Solanum pennellii HOM05D000135 ORTHO05D000816 2.7e-06 56.2 102 35.3
Sopen11g029430 Solanum pennellii HOM05D000135 ORTHO05D000816 2.7e-06 56.2 102 35.3
Atru.chr9.1078 Acer truncatum HOM05D000135 ORTHO05D000816 3.5e-06 55.8 102 37.3
CiPaw.07G129800 Carya illinoinensis HOM05D000135 ORTHO05D000816 3.5e-06 55.8 46 52.2
Actinidia38214 Actinidia chinensis HOM05D000135 ORTHO05D000816 4.6e-06 55.5 105 37.1
Lsat_1_v5_gn_8_148500 Lactuca sativa HOM05D000135 ORTHO05D000816 4.6e-06 55.5 112 36.6
Haze_22895 Corylus avellana HOM05D000135 ORTHO05D000816 6.0e-06 55.1 52 51.9
Eucgr.F03632 Eucalyptus grandis HOM05D000135 ORTHO05D000816 6.0e-06 55.1 49 55.1
MD15G1270300 Malus domestica HOM05D000135 ORTHO05D000816 6.0e-06 55.1 106 36.8
Manes.12G099300 Manihot esculenta HOM05D000135 ORTHO05D000816 6.0e-06 55.1 105 34.3
TAR622G0218 Trochodendron aralioides HOM05D000135 ORTHO05D000816 6.0e-06 55.1 108 36.1
Aqoxy5G00935 Aquilegia oxysepala HOM05D000135 ORTHO05D000816 7.8e-06 54.7 102 35.3
Duzib093G1260 Durio zibethinus HOM05D000135 ORTHO05D000816 7.8e-06 54.7 102 35.3
Solyc02g094000.1 Solanum lycopersicum HOM05D000135 ORTHO05D000816 7.8e-06 54.7 47 55.3
PGSC0003DMG400020261 Solanum tuberosum HOM05D000135 ORTHO05D000816 7.8e-06 54.7 47 55.3


User provided reference genes

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