Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33336 Davidia involucrata HOM05D006526 ORTHO05D008496 2.2e-196 688.7 342 100.0
Actinidia05903 Actinidia chinensis HOM05D006526 ORTHO05D008496 6.4e-143 511.1 342 73.1
Hma1.2p1_1278F.1_g272280 Hydrangea macrophylla HOM05D006526 ORTHO05D008496 2.4e-137 492.7 351 74.6
Actinidia36203 Actinidia chinensis HOM05D006526 ORTHO05D008496 9.9e-136 487.3 327 72.8
Rhsim10G0006300 Rhododendron simsii HOM05D006526 ORTHO05D008496 1.3e-135 486.9 336 72.9
Potri.001G330100 Populus trichocarpa HOM05D006526 ORTHO05D008496 2.5e-131 472.6 342 69.6
vmacro05958 Vaccinium macrocarpon HOM05D006526 ORTHO05D008496 9.6e-131 470.7 338 69.8
Migut.K01466 Erythranthe guttata HOM05D006526 ORTHO05D008496 2.8e-130 469.2 328 70.1
Solyc02g094150.4 Solanum lycopersicum HOM05D006526 ORTHO05D008496 5.2e-129 464.9 337 71.2
Sopen02g038780 Solanum pennellii HOM05D006526 ORTHO05D008496 5.2e-129 464.9 337 70.9
Manes.15G161000 Manihot esculenta HOM05D006526 ORTHO05D008496 9.3e-126 454.1 342 67.5
MSTRG.3258 Avicennia marina HOM05D006526 ORTHO05D008496 3.5e-125 452.2 328 70.7
Nitab4.5_0002050g0140 Nicotiana tabacum HOM05D006526 ORTHO05D008496 6.0e-125 451.4 324 71.3
Duzib147G1379 Durio zibethinus HOM05D006526 ORTHO05D008496 3.0e-124 449.1 339 67.0
Thecc.04G036000 Theobroma cacao HOM05D006526 ORTHO05D008496 3.9e-124 448.7 314 71.0
Cc07_g00840 Coffea canephora HOM05D006526 ORTHO05D008496 5.1e-124 448.4 343 67.3
COL.COLO4_13261 Corchorus olitorius HOM05D006526 ORTHO05D008496 6.6e-124 448.0 344 66.9
CAN.G473.100 Capsicum annuum HOM05D006526 ORTHO05D008496 1.1e-123 447.2 340 68.5
GSVIVG01033093001 Vitis vinifera HOM05D006526 ORTHO05D008496 5.6e-123 444.9 307 72.6
CiPaw.03G055600 Carya illinoinensis HOM05D006526 ORTHO05D008496 4.8e-122 441.8 346 65.6
Sabra16G0211400 Salix brachista HOM05D006526 ORTHO05D008496 6.2e-122 441.4 323 67.5
Peaxi162Scf00420g00560 Petunia axillaris HOM05D006526 ORTHO05D008496 3.1e-121 439.1 325 70.5
Nn4g22325 Nelumbo nucifera HOM05D006526 ORTHO05D008496 4.0e-121 438.7 341 66.6
Ciclev10015967m.g Citrus clementina HOM05D006526 ORTHO05D008496 9.0e-121 437.6 342 64.9
Gohir.D09G036900 Gossypium hirsutum HOM05D006526 ORTHO05D008496 9.9e-120 434.1 330 67.0
Oeu005097.1 Olea europaea HOM05D006526 ORTHO05D008496 4.9e-119 431.8 292 72.3
Gorai.006G042000 Gossypium raimondii HOM05D006526 ORTHO05D008496 1.1e-118 430.6 330 66.7
SGA_v2.0_scaffold47G17596 Striga asiatica HOM05D006526 ORTHO05D008496 4.2e-118 428.7 358 62.3
PGR042G1209 Punica granatum HOM05D006526 ORTHO05D008496 5.4e-118 428.3 307 67.8
TWI56G1218 Tripterygium wilfordii HOM05D006526 ORTHO05D008496 5.4e-118 428.3 318 66.7
unitig_88.g27695 Utricularia gibba HOM05D006526 ORTHO05D008496 6.0e-117 424.9 326 65.3
Cpa.g.sc171.15 Carica papaya HOM05D006526 ORTHO05D008496 5.1e-116 421.8 303 67.3
Eucgr.J02351 Eucalyptus grandis HOM05D006526 ORTHO05D008496 1.5e-115 420.2 315 66.7
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 2.5e-115 419.5 320 67.5
RcHm_v2.0_Chr2g0175561 Rosa chinensis HOM05D006526 ORTHO05D008496 2.5e-115 419.5 339 64.0
SalBow7G1947 Salvia bowleyana HOM05D006526 ORTHO05D008496 4.3e-115 418.7 352 65.6
CANSAT64G1234 Cannabis sativa HOM05D006526 ORTHO05D008496 5.6e-115 418.3 312 67.9
THA.LOC104821121 Tarenaya hassleriana HOM05D006526 ORTHO05D008496 8.1e-114 414.5 301 68.4
Aa31LG5G11040 Aethionema arabicum HOM05D006526 ORTHO05D008496 2.4e-113 412.9 334 63.8
Cfa007227 Carpinus fangiana HOM05D006526 ORTHO05D008496 5.3e-113 411.8 343 62.4
BcaC09g49919 Brassica carinata HOM05D006526 ORTHO05D008496 6.9e-113 411.4 329 63.8
A01p25030 Brassica napus HOM05D006526 ORTHO05D008496 9.0e-113 411.0 321 65.1
FvH4_6g53521 Fragaria vesca HOM05D006526 ORTHO05D008496 9.0e-113 411.0 333 63.1
BraA01t02414Z Brassica rapa HOM05D006526 ORTHO05D008496 2.0e-112 409.8 321 64.8
BolC1t03065H Brassica oleracea HOM05D006526 ORTHO05D008496 3.4e-112 409.1 321 64.8
Nitab4.5_0010204g0040 Nicotiana tabacum HOM05D006526 ORTHO05D008496 4.5e-112 408.7 306 68.6
C01p31260 Brassica napus HOM05D006526 ORTHO05D008496 9.9e-112 407.5 321 64.5
Lalb_Chr14g0363401 Lupinus albus HOM05D006526 ORTHO05D008496 9.9e-112 407.5 290 70.0
Atru.chr6.2570 Acer truncatum HOM05D006526 ORTHO05D008496 2.2e-111 406.4 318 67.3
Prupe.3G306300 Prunus persica HOM05D006526 ORTHO05D008496 2.9e-111 406.0 335 63.3
BcaB05g22967 Brassica carinata HOM05D006526 ORTHO05D008496 3.8e-111 405.6 318 64.5
Thhalv10000573m.g Eutrema salsugineum HOM05D006526 ORTHO05D008496 8.4e-111 404.4 340 62.9
Glyma.19G091200 Glycine max HOM05D006526 ORTHO05D008496 8.4e-111 404.4 319 65.8
Phvul.001G093500 Phaseolus vulgaris HOM05D006526 ORTHO05D008496 1.1e-110 404.1 319 65.5
MELO3C014888.2 Cucumis melo HOM05D006526 ORTHO05D008496 1.4e-110 403.7 328 64.3
Lsat_1_v5_gn_2_93080 Lactuca sativa HOM05D006526 ORTHO05D008496 1.4e-110 403.7 328 63.1
CsaV3_3G027000 Cucumis sativus L. HOM05D006526 ORTHO05D008496 1.9e-110 403.3 327 63.0
arahy.Tifrunner.gnm1.ann1.C96CVE Arachis hypogaea HOM05D006526 ORTHO05D008496 2.4e-110 402.9 334 63.8
arahy.Tifrunner.gnm1.ann1.4N5YWB Arachis hypogaea HOM05D006526 ORTHO05D008496 4.2e-110 402.1 311 66.2
ECA238G1207 Erigeron canadensis HOM05D006526 ORTHO05D008496 5.5e-110 401.7 331 61.6
AT3G01920 Arabidopsis thaliana HOM05D006526 ORTHO05D008496 7.1e-110 401.4 294 66.3
Aqoxy3G01551 Aquilegia oxysepala HOM05D006526 ORTHO05D008496 2.7e-109 399.4 291 67.0
HanXRQChr14g0450751 Helianthus annuus HOM05D006526 ORTHO05D008496 1.8e-108 396.7 335 60.3
ClCG05G013530 Citrullus lanatus HOM05D006526 ORTHO05D008496 2.3e-108 396.4 323 63.8
MD09G1010800 Malus domestica HOM05D006526 ORTHO05D008496 3.9e-108 395.6 327 63.0
Sp3g00170 Schrenkiella parvula HOM05D006526 ORTHO05D008496 8.7e-108 394.4 318 63.2
ATR0561G126 Amborella trichopoda HOM05D006526 ORTHO05D008496 1.1e-107 394.0 287 66.6
Carub.0003s0016 Capsella rubella HOM05D006526 ORTHO05D008496 3.3e-107 392.5 320 63.4
Lj1g0010270 Lotus japonicus HOM05D006526 ORTHO05D008496 7.4e-107 391.3 312 64.4
AL3G10210 Arabidopsis lyrata HOM05D006526 ORTHO05D008496 1.3e-106 390.6 301 65.8
PSO017G5829 Papaver somniferum HOM05D006526 ORTHO05D008496 1.1e-105 387.5 338 60.9
PSO478G2106 Papaver somniferum HOM05D006526 ORTHO05D008496 1.4e-105 387.1 338 60.7
Psat3g163920 Pisum sativum HOM05D006526 ORTHO05D008496 7.1e-102 374.8 292 64.7
AUR62003516 Chenopodium quinoa HOM05D006526 ORTHO05D008496 1.6e-101 373.6 336 57.4
AUR62017828 Chenopodium quinoa HOM05D006526 ORTHO05D008496 4.6e-101 372.1 318 59.1
CDE05G2481 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 7.9e-101 371.3 299 61.2
CSS0009464 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 9.7e-99 364.4 259 72.6
CARHR075020 Cardamine hirsuta HOM05D006526 ORTHO05D008496 3.1e-97 359.4 312 59.9
Ah.03g147500 Amaranthus hybridus HOM05D006526 ORTHO05D008496 1.2e-96 357.5 264 65.2
Hund04346 Selenicereus undatus HOM05D006526 ORTHO05D008496 4.5e-96 355.5 312 59.3
Haze_14876 Corylus avellana HOM05D006526 ORTHO05D008496 6.5e-95 351.7 342 58.5
Os08g0531300 Oryza sativa ssp. japonica HOM05D006526 ORTHO05D008496 7.2e-94 348.2 297 58.2
Zm00001eb175140 Zea mays HOM05D006526 ORTHO05D008496 2.5e-91 339.7 317 54.3
CDE06G2358 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 2.8e-90 336.3 299 59.2
Gohir.A09G035700 Gossypium hirsutum HOM05D006526 ORTHO05D008496 3.7e-90 335.9 330 56.1
MBI11_g23476_MAGBIO Magnolia biondii HOM05D006526 ORTHO05D008496 1.5e-88 330.5 327 56.9
AagrBONN_evm.TU.Sc2ySwM_228.1921 Anthoceros agrestis HOM05D006526 ORTHO05D008496 4.2e-86 322.4 300 55.3
Pp3c2_22020 Physcomitrium patens HOM05D006526 ORTHO05D008496 1.0e-84 317.8 309 51.8
PGSC0003DMG400020254 Solanum tuberosum HOM05D006526 ORTHO05D008496 6.3e-82 308.5 173 83.8
Sed0022734 Sechium edule HOM05D006526 ORTHO05D008496 3.1e-81 306.2 231 64.9
TPR.G14866 Trifolium pratense HOM05D006526 ORTHO05D008496 1.0e-79 301.2 321 52.6
DCAR_000965 Daucus carota HOM05D006526 ORTHO05D008496 1.3e-79 300.8 203 73.4
QL02p071425 Quercus lobata HOM05D006526 ORTHO05D008496 1.7e-79 300.4 177 80.8
TAR629G1757 Trochodendron aralioides HOM05D006526 ORTHO05D008496 9.4e-78 294.7 242 64.0
VMungo1383G1669 Vigna mungo HOM05D006526 ORTHO05D008496 4.7e-77 292.4 238 63.0
Sc16g0003120 Simmondsia chinensis HOM05D006526 ORTHO05D008496 8.2e-74 281.6 256 59.0
SMO137G0097 Selaginella moellendorffii HOM05D006526 ORTHO05D008496 1.8e-73 280.4 291 49.5
FAN09G0514 Fragaria x ananassa HOM05D002875 ORTHO05D003215 1.3e-71 274.2 333 50.5
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 4.7e-69 265.8 245 57.6
Ca_12965_v3 Cicer arietinum L. HOM05D006526 ORTHO05D008496 9.7e-67 258.1 245 56.3
FAN05G0398 Fragaria x ananassa HOM05D002875 ORTHO05D003215 4.5e-64 249.2 265 52.8
BcaB05g22970 Brassica carinata HOM05D006526 ORTHO05D008496 1.6e-56 224.2 145 73.1
Glyma.16G056500 Glycine max HOM05D006526 ORTHO05D008496 4.2e-54 216.1 192 61.5
Cre01.g015950 Chlamydomonas reinhardtii HOM05D006526 ORTHO05D008496 2.5e-46 190.3 277 41.2
Medtr7g034590 Medicago truncatula HOM05D006526 ORTHO05D008496 8.9e-44 181.8 257 43.6
ECA236G2817 Erigeron canadensis HOM05D006526 ORTHO05D008496 4.1e-41 172.9 141 61.0
MCO14G032 Micromonas commoda HOM05D006526 ORTHO05D008496 3.0e-39 166.8 263 36.1
CSS0005086 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 6.2e-37 159.1 105 77.1
Glyma.16G056450 Glycine max HOM05D006526 ORTHO05D008496 1.9e-33 147.5 104 70.2
QL02p071428 Quercus lobata HOM05D006526 ORTHO05D008496 1.2e-29 134.8 118 63.6
FAN02G2201 Fragaria x ananassa HOM05D002323 ORTHO05D002470 3.6e-29 133.3 142 50.7
CDE05G0752 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 9.9e-27 125.2 111 55.9
CDE05G3548 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 4.6e-24 116.3 76 72.4
Medtr6g045607 Medicago truncatula HOM05D006526 ORTHO05D008496 6.0e-24 115.9 73 71.2
CSS0022358 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 6.4e-18 95.9 76 64.5
CSS0047032 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 1.9e-17 94.4 77 62.3
EL10Ac8g19274 Beta vulgaris HOM05D006526 ORTHO05D008496 1.6e-16 91.3 68 64.7
BraA06t24956Z Brassica rapa HOM05D006526 ORTHO05D024464 2.7e-16 90.5 113 48.7
Ca_12964_v3 Cicer arietinum L. HOM05D006526 ORTHO05D008496 1.7e-15 87.8 61 72.1
BcaB05g22969 Brassica carinata HOM05D006526 ORTHO05D008496 6.6e-15 85.9 55 76.4
Medtr6g045617 Medicago truncatula HOM05D006526 ORTHO05D008496 8.7e-15 85.5 69 60.9
C08p24000 Brassica napus HOM05D006526 ORTHO05D024464 3.3e-14 83.6 79 59.5
BcaC07g39377 Brassica carinata HOM05D006526 ORTHO05D024464 2.6e-11 73.9 55 69.1
BolC8t50022H Brassica oleracea HOM05D006526 ORTHO05D024464 1.7e-10 71.2 55 67.3
CDE04G1482 Ceratophyllum demersum HOM05D006526 ORTHO05D003215 1.2e-08 65.1 58 55.2
QL06p007766 Quercus lobata HOM05D006526 ORTHO05D008496 2.3e-07 60.8 41 65.9
A06p18730 Brassica napus HOM05D006526 ORTHO05D024464 3.9e-07 60.1 53 56.6


User provided reference genes

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