Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33335 Davidia involucrata HOM05D001420 ORTHO05D009292 2.4e-69 265.4 133 100.0
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 3.2e-58 228.4 126 88.9
Dinv25658 Davidia involucrata HOM05D001420 ORTHO05D002488 8.8e-56 220.3 126 86.5
Rhsim08G0042700 Rhododendron simsii HOM05D001420 ORTHO05D009292 1.7e-54 216.1 126 83.3
CSS0004965 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 2.2e-54 215.7 126 84.1
Hma1.2p1_1278F.1_g272270 Hydrangea macrophylla HOM05D001420 ORTHO05D009292 8.2e-54 213.8 121 85.1
vmacro18348 Vaccinium macrocarpon HOM05D001420 ORTHO05D009292 4.1e-53 211.5 126 81.0
TAR622G0082 Trochodendron aralioides HOM05D001420 ORTHO05D009292 1.7e-51 206.1 120 83.3
GSVIVG01033089001 Vitis vinifera HOM05D001420 ORTHO05D009292 2.9e-51 205.3 118 83.9
Haze_14879 Corylus avellana HOM05D001420 ORTHO05D009292 8.5e-51 203.8 120 82.5
Cc07_g00860 Coffea canephora HOM05D001420 ORTHO05D009292 2.5e-50 202.2 114 86.0
Cfa007225 Carpinus fangiana HOM05D001420 ORTHO05D009292 3.2e-50 201.8 120 81.7
CSS0009369 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 4.2e-50 201.4 140 75.0
Haze_14955 Corylus avellana HOM05D001420 ORTHO05D009292 7.2e-50 200.7 120 81.7
Oeu035224.1 Olea europaea HOM05D001420 ORTHO05D009292 7.2e-50 200.7 120 82.5
Migut.F00060 Erythranthe guttata HOM05D001420 ORTHO05D009292 4.7e-49 198.0 119 79.0
PGR142G3591 Punica granatum HOM05D001420 ORTHO05D009292 1.4e-48 196.4 120 80.0
Nitab4.5_0005161g0070 Nicotiana tabacum HOM05D001420 ORTHO05D009292 2.3e-48 195.7 117 82.1
MSTRG.3074 Avicennia marina HOM05D001420 ORTHO05D009292 8.8e-48 193.7 120 79.2
SGA_v2.0_scaffold44G16915 Striga asiatica HOM05D001420 ORTHO05D009292 8.8e-48 193.7 119 78.2
RcHm_v2.0_Chr2g0175601 Rosa chinensis HOM05D001420 ORTHO05D009292 3.3e-47 191.8 117 78.6
MBI11_g44423_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 9.7e-47 190.3 126 73.8
Nn3g16459 Nelumbo nucifera HOM05D001420 ORTHO05D009292 9.7e-47 190.3 129 74.4
Prupe.3G306700 Prunus persica HOM05D001420 ORTHO05D009292 1.7e-46 189.5 117 79.5
Atru.chr6.2574 Acer truncatum HOM05D001420 ORTHO05D009292 2.8e-46 188.7 120 77.5
FvH4_6g53561 Fragaria vesca HOM05D001420 ORTHO05D009292 4.8e-46 188.0 117 76.9
FAN14G1551 Fragaria x ananassa HOM05D001420 ORTHO05D000136 4.8e-46 188.0 117 76.9
THA.LOC104825624 Tarenaya hassleriana HOM05D001420 ORTHO05D009292 4.8e-46 188.0 118 74.6
Aqoxy3G01555 Aquilegia oxysepala HOM05D001420 ORTHO05D009292 6.3e-46 187.6 120 75.0
Potri.001G329600 Populus trichocarpa HOM05D001420 ORTHO05D009292 6.3e-46 187.6 118 78.8
MD09G1010400 Malus domestica HOM05D001420 ORTHO05D009292 8.2e-46 187.2 114 78.9
Nitab4.5_0000559g0390 Nicotiana tabacum HOM05D001420 ORTHO05D009292 8.2e-46 187.2 124 75.8
FAN09G1657 Fragaria x ananassa HOM05D001420 ORTHO05D009292 1.4e-45 186.4 117 75.2
PSO478G4377 Papaver somniferum HOM05D001420 ORTHO05D009292 1.4e-45 186.4 118 74.6
QL02p071311 Quercus lobata HOM05D001420 ORTHO05D009292 1.4e-45 186.4 130 75.4
Lj1g0001542 Lotus japonicus HOM05D001420 ORTHO05D009292 3.1e-45 185.3 121 73.6
AUR62017830 Chenopodium quinoa HOM05D001420 ORTHO05D009292 4.1e-45 184.9 118 76.3
AUR62003518 Chenopodium quinoa HOM05D001420 ORTHO05D009292 9.1e-45 183.7 118 75.4
Thecc.04G036700 Theobroma cacao HOM05D001420 ORTHO05D009292 2.0e-44 182.6 123 72.4
TPR.G38286 Trifolium pratense HOM05D001420 ORTHO05D009292 3.5e-44 181.8 121 72.7
ATR0561G272 Amborella trichopoda HOM05D001420 ORTHO05D009292 4.5e-44 181.4 125 70.4
SalBow4G1795 Salvia bowleyana HOM05D001420 ORTHO05D009292 4.5e-44 181.4 118 73.7
Cpa.g.sc171.11 Carica papaya HOM05D001420 ORTHO05D009292 5.9e-44 181.0 118 74.6
Sc15g0002740 Simmondsia chinensis HOM05D001420 ORTHO05D009292 7.7e-44 180.6 118 75.4
Manes.15G161200 Manihot esculenta HOM05D001420 ORTHO05D009292 1.7e-43 179.5 123 74.8
Eucgr.I01645 Eucalyptus grandis HOM05D001420 ORTHO05D009292 2.2e-43 179.1 117 73.5
Lalb_Chr22g0360361 Lupinus albus HOM05D001420 ORTHO05D009292 2.2e-43 179.1 121 72.7
HPP92_009721 Vanilla planifolia HOM05D001420 ORTHO05D009292 2.9e-43 178.7 120 73.3
Thhalv10004992m.g Eutrema salsugineum HOM05D001420 ORTHO05D009292 3.8e-43 178.3 118 71.2
Glyma.16G056200 Glycine max HOM05D001420 ORTHO05D009292 3.8e-43 178.3 118 72.0
Glyma.19G091500 Glycine max HOM05D001420 ORTHO05D009292 3.8e-43 178.3 118 73.7
HanXRQChr17g0550091 Helianthus annuus HOM05D001420 ORTHO05D009292 3.8e-43 178.3 114 77.2
BcaB04g19424 Brassica carinata HOM05D001420 ORTHO05D009292 5.0e-43 177.9 121 70.2
Gohir.D09G037000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 5.0e-43 177.9 130 67.7
Medtr7g029105 Medicago truncatula HOM05D001420 ORTHO05D009292 5.0e-43 177.9 120 72.5
AL5G16160 Arabidopsis lyrata HOM05D001420 ORTHO05D009292 6.5e-43 177.6 118 71.2
Gorai.006G042300 Gossypium raimondii HOM05D001420 ORTHO05D009292 6.5e-43 177.6 130 67.7
Lsat_1_v5_gn_0_26060 Lactuca sativa HOM05D001420 ORTHO05D009292 6.5e-43 177.6 111 77.5
arahy.Tifrunner.gnm1.ann1.WDB61R Arachis hypogaea HOM05D001420 ORTHO05D009292 8.5e-43 177.2 121 71.1
Duzib147G1300 Durio zibethinus HOM05D001420 ORTHO05D009292 8.5e-43 177.2 123 69.1
FAN05G4256 Fragaria x ananassa HOM05D001420 ORTHO05D009292 8.5e-43 177.2 129 68.2
CANSAT64G1297 Cannabis sativa HOM05D001420 ORTHO05D009292 1.4e-42 176.4 114 74.6
CARHR148270 Cardamine hirsuta HOM05D001420 ORTHO05D009292 1.4e-42 176.4 121 70.2
TWI60G0015 Tripterygium wilfordii HOM05D001420 ORTHO05D009292 1.4e-42 176.4 121 72.7
Sp2g16180 Schrenkiella parvula HOM05D001420 ORTHO05D009292 3.2e-42 175.3 121 69.4
BcaC04g23914 Brassica carinata HOM05D001420 ORTHO05D009292 7.2e-42 174.1 118 69.5
Psat3g174720 Pisum sativum HOM05D001420 ORTHO05D002488 7.2e-42 174.1 117 71.8
Gohir.A09G036000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 9.4e-42 173.7 123 68.3
PSO017G5378 Papaver somniferum HOM05D001420 ORTHO05D009292 9.4e-42 173.7 123 69.1
Phvul.001G093200 Phaseolus vulgaris HOM05D001420 ORTHO05D009292 9.4e-42 173.7 119 69.7
AT3G27050 Arabidopsis thaliana HOM05D001420 ORTHO05D009292 1.2e-41 173.3 118 70.3
unitig_60.g25408 Utricularia gibba HOM05D001420 ORTHO05D009292 1.2e-41 173.3 119 73.1
A09p03260 Brassica napus HOM05D001420 ORTHO05D009292 2.1e-41 172.6 122 68.9
BraA09t35964Z Brassica rapa HOM05D001420 ORTHO05D009292 2.1e-41 172.6 122 68.9
Carub.0005s0529 Capsella rubella HOM05D001420 ORTHO05D009292 4.7e-41 171.4 118 68.6
VMungo1383G3091 Vigna mungo HOM05D001420 ORTHO05D009292 4.7e-41 171.4 125 68.0
BolC9t53267H Brassica oleracea HOM05D001420 ORTHO05D009292 8.0e-41 170.6 122 68.0
PGSC0003DMG400022915 Solanum tuberosum HOM05D001420 ORTHO05D009292 1.0e-40 170.2 114 69.3
C09p03460 Brassica napus HOM05D001420 ORTHO05D009292 1.8e-40 169.5 119 68.9
CDE05G2056 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 1.8e-40 169.5 118 67.8
ECA246G1005 Erigeron canadensis HOM05D001420 ORTHO05D002488 2.3e-40 169.1 120 70.8
SalBow4G0299 Salvia bowleyana HOM05D001420 ORTHO05D009292 1.5e-39 166.4 149 59.1
Aa31LG2G5540 Aethionema arabicum HOM05D001420 ORTHO05D009292 7.4e-39 164.1 121 65.3
Sed0020252 Sechium edule HOM05D001420 ORTHO05D009292 2.4e-37 159.1 126 65.9
SEGI_21368 Sequoiadendron giganteum HOM05D001420 ORTHO05D009292 7.0e-37 157.5 118 61.9
Pp3c1_27230 Physcomitrium patens HOM05D001420 ORTHO05D009292 1.2e-36 156.8 126 61.1
CsaV3_3G026980 Cucumis sativus L. HOM05D001420 ORTHO05D009292 1.6e-36 156.4 117 69.2
ClCG05G013550 Citrullus lanatus HOM05D001420 ORTHO05D009292 2.0e-36 156.0 115 69.6
Sabra16G0211000 Salix brachista HOM05D001420 ORTHO05D009292 2.6e-36 155.6 193 49.2
Pp3c14_4200 Physcomitrium patens HOM05D001420 ORTHO05D009292 3.5e-36 155.2 126 59.5
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 7.7e-36 154.1 93 80.6
MELO3C014890.2 Cucumis melo HOM05D001420 ORTHO05D009292 1.0e-35 153.7 127 63.0
Os11g0488600 Oryza sativa ssp. japonica HOM05D001420 ORTHO05D009292 5.0e-35 151.4 129 60.5
AagrBONN_evm.TU.Sc2ySwM_228.3079 Anthoceros agrestis HOM05D001420 ORTHO05D009292 4.2e-34 148.3 118 59.3
Ah.03g147520 Amaranthus hybridus HOM05D001420 ORTHO05D009292 2.7e-33 145.6 90 77.8
SMO119G0238 Selaginella moellendorffii HOM05D001420 ORTHO05D009292 3.6e-33 145.2 118 61.0
Zm00001eb112760 Zea mays HOM05D001420 ORTHO05D009292 1.2e-31 140.2 145 52.4
CDE05G0537 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 2.8e-30 135.6 117 56.4
Peaxi162Scf00700g00030 Petunia axillaris HOM05D001420 ORTHO05D009292 1.4e-29 133.3 80 78.8
RcHm_v2.0_Chr2g0175681 Rosa chinensis HOM05D001420 ORTHO05D009292 5.3e-29 131.3 80 78.8
Ciclev10017089m.g Citrus clementina HOM05D001420 ORTHO05D009292 5.0e-27 124.8 80 75.0
CBR_g762 Chara braunii HOM05D001420 ORTHO05D009292 1.5e-26 123.2 124 46.0
Lj7C610G7 Lonicera japonica HOM05D001420 ORTHO05D009292 2.2e-22 109.4 60 86.7
CiPaw.03G055800 Carya illinoinensis HOM05D001420 ORTHO05D002488 7.7e-20 100.9 64 79.7
MD16G1254400 Malus domestica HOM05D001420 ORTHO05D009292 5.0e-19 98.2 62 71.0
Nitab4.5_0000525g0030 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.2e-12 77.0 43 81.4
Hund12739 Selenicereus undatus HOM05D001420 ORTHO05D009292 2.0e-12 76.3 52 76.9
Cre01.g049050 Chlamydomonas reinhardtii HOM05D001420 ORTHO05D009292 6.1e-09 64.7 121 29.8
Actinidia30872 Actinidia chinensis HOM05D005765 ORTHO05D002313 3.4e-07 58.9 29 93.1


User provided reference genes

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