Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33310 Davidia involucrata HOM05D005105 ORTHO05D006244 4.3e-74 281.2 138 100.0
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 2.0e-47 192.6 131 72.5
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 3.4e-42 175.3 135 67.4
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 5.9e-39 164.5 138 62.3
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 5.9e-39 164.5 137 64.2
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 1.1e-37 160.2 136 60.3
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 6.1e-36 154.5 180 47.8
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 6.8e-35 151.0 151 51.7
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 3.4e-34 148.7 132 56.1
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 1.3e-33 146.7 143 54.5
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 1.7e-33 146.4 140 57.9
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 4.9e-33 144.8 141 51.1
PSO017G6125 Papaver somniferum HOM05D005105 ORTHO05D006244 2.4e-32 142.5 140 54.3
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 5.4e-32 141.4 130 51.5
FAN14G3030 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.2e-31 140.2 132 53.0
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 1.6e-31 139.8 135 54.1
PSO478G4366 Papaver somniferum HOM05D005105 ORTHO05D006244 2.7e-31 139.0 140 52.9
PSO063G6475 Papaver somniferum HOM05D005105 ORTHO05D006244 5.9e-31 137.9 140 52.1
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 7.7e-31 137.5 135 54.1
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 7.7e-31 137.5 136 52.9
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 1.0e-30 137.1 135 57.8
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.7e-30 136.3 131 54.2
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 2.3e-30 136.0 131 54.2
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 3.8e-30 135.2 135 52.6
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 6.6e-30 134.4 130 57.7
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 8.6e-30 134.0 134 51.5
FAN05G0264 Fragaria x ananassa HOM05D005105 ORTHO05D006244 8.6e-30 134.0 130 52.3
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 1.9e-29 132.9 129 55.8
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 4.2e-29 131.7 135 51.1
CSS0040735 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 5.5e-29 131.3 107 67.3
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 7.2e-29 131.0 135 52.6
SGA_v2.0_scaffold253G45172 Striga asiatica HOM05D005105 ORTHO05D006244 1.6e-28 129.8 129 53.5
Potri.001G325500 Populus trichocarpa HOM05D005105 ORTHO05D006244 3.6e-28 128.6 132 53.8
Duzib264G1310 Durio zibethinus HOM05D005105 ORTHO05D006244 4.7e-28 128.3 138 52.9
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 8.0e-28 127.5 131 51.1
GSVIVG01008594001 Vitis vinifera HOM05D005105 ORTHO05D006244 1.0e-27 127.1 145 49.0
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 3.0e-27 125.6 202 41.6
Thecc.04G041900 Theobroma cacao HOM05D005105 ORTHO05D006244 4.0e-27 125.2 142 51.4
Atru.chr6.2612 Acer truncatum HOM05D005105 ORTHO05D006244 6.8e-27 124.4 134 53.7
Ca_07318_v3 Cicer arietinum L. HOM05D005105 ORTHO05D006244 6.8e-27 124.4 142 47.9
Dinv23186 Davidia involucrata HOM05D005105 ORTHO05D006244 6.8e-27 124.4 140 47.9
Lalb_Chr00c40g0412501 Lupinus albus HOM05D005105 ORTHO05D006244 6.8e-27 124.4 133 50.4
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 6.8e-27 124.4 136 47.1
Sabra16G0208000 Salix brachista HOM05D005105 ORTHO05D006244 6.8e-27 124.4 132 52.3
HanXRQChr17g0551611 Helianthus annuus HOM05D005105 ORTHO05D006244 8.9e-27 124.0 129 51.2
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea HOM05D005105 ORTHO05D006244 1.2e-26 123.6 146 42.5
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea HOM05D005105 ORTHO05D006244 1.2e-26 123.6 146 42.5
Glyma.02G065000 Glycine max HOM05D005105 ORTHO05D006244 1.2e-26 123.6 138 47.1
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 1.2e-26 123.6 131 51.1
Gohir.D07G238700 Gossypium hirsutum HOM05D005105 ORTHO05D006244 2.0e-26 122.9 142 50.7
Peaxi162Scf00331g00014 Petunia axillaris HOM05D005105 ORTHO05D006244 2.0e-26 122.9 129 54.3
Psat3g181600 Pisum sativum HOM05D005105 ORTHO05D006244 2.6e-26 122.5 133 47.4
THA.LOC104825638 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 4.4e-26 121.7 133 50.4
FAN05G2765 Fragaria x ananassa HOM05D005105 ORTHO05D006244 5.7e-26 121.3 152 44.7
Gorai.001G274700 Gossypium raimondii HOM05D005105 ORTHO05D006244 5.7e-26 121.3 142 50.0
Lj1g0026609 Lotus japonicus HOM05D005105 ORTHO05D006244 5.7e-26 121.3 131 47.3
DCAR_015209 Daucus carota HOM05D005105 ORTHO05D006244 9.8e-26 120.6 141 46.1
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 1.3e-25 120.2 140 50.0
Gohir.A07G231500 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.7e-25 119.8 142 49.3
Lj2g0026571 Lotus japonicus HOM05D005105 ORTHO05D006244 1.7e-25 119.8 136 49.3
Glyma.16G052500 Glycine max HOM05D005105 ORTHO05D006244 2.2e-25 119.4 131 48.9
CiPaw.03G004800 Carya illinoinensis HOM05D005105 ORTHO05D006244 2.9e-25 119.0 115 54.8
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala HOM05D005105 ORTHO05D006244 3.7e-25 118.6 137 46.0
EL10Ac6g15451 Beta vulgaris HOM05D005105 ORTHO05D006244 3.7e-25 118.6 153 41.2
Gohir.A09G038300 Gossypium hirsutum HOM05D005105 ORTHO05D006244 4.9e-25 118.2 146 47.3
Ciclev10014761m.g Citrus clementina HOM05D005105 ORTHO05D006244 6.3e-25 117.9 152 48.7
ECA246G4542 Erigeron canadensis HOM05D005105 ORTHO05D006244 6.3e-25 117.9 129 48.8
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 6.3e-25 117.9 114 54.4
AUR62003394 Chenopodium quinoa HOM05D005105 ORTHO05D006244 8.3e-25 117.5 166 39.2
SalBow4G0131 Salvia bowleyana HOM05D005105 ORTHO05D006244 8.3e-25 117.5 136 49.3
RcHm_v2.0_Chr2g0176111 Rosa chinensis HOM05D005105 ORTHO05D006244 1.4e-24 116.7 151 42.4
Actinidia18329 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.8e-24 116.3 144 45.8
Gorai.006G044700 Gossypium raimondii HOM05D005105 ORTHO05D006244 1.8e-24 116.3 146 45.2
AL5G15980 Arabidopsis lyrata HOM05D005105 ORTHO05D006244 2.4e-24 115.9 134 47.8
AT3G26950 Arabidopsis thaliana HOM05D005105 ORTHO05D006244 2.4e-24 115.9 134 47.8
Carub.0005s0514 Capsella rubella HOM05D005105 ORTHO05D006244 2.4e-24 115.9 135 49.6
Phvul.004G070700 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 2.4e-24 115.9 135 45.9
Sp2g16080 Schrenkiella parvula HOM05D005105 ORTHO05D006244 4.1e-24 115.2 138 47.8
THA.LOC104805319 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 4.1e-24 115.2 133 47.4
Aa31LG2G5630 Aethionema arabicum HOM05D005105 ORTHO05D006244 5.4e-24 114.8 135 50.4
Glyma.16G146100 Glycine max HOM05D005105 ORTHO05D006244 5.4e-24 114.8 142 43.7
CSS0042485 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 7.0e-24 114.4 99 60.6
Gohir.D09G039801 Gossypium hirsutum HOM05D005105 ORTHO05D006244 9.2e-24 114.0 146 45.2
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 9.2e-24 114.0 102 58.8
VMungo0464G0185 Vigna mungo HOM05D005105 ORTHO05D006244 2.0e-23 112.8 134 44.0
BcaC06g33873 Brassica carinata HOM05D005105 ORTHO05D006244 4.6e-23 111.7 135 45.9
C07p36060 Brassica napus HOM05D005105 ORTHO05D006244 4.6e-23 111.7 135 45.9
BolC7t44120H Brassica oleracea HOM05D005105 ORTHO05D006244 4.6e-23 111.7 135 45.9
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 1.3e-22 110.2 110 57.3
AUR62029433 Chenopodium quinoa HOM05D005105 ORTHO05D006244 2.3e-22 109.4 128 44.5
BcaC06g31032 Brassica carinata HOM05D005105 ORTHO05D006244 3.9e-22 108.6 133 45.9
ClCG01G008700 Citrullus lanatus HOM05D005105 ORTHO05D006244 3.9e-22 108.6 138 47.1
Thhalv10003939m.g Eutrema salsugineum HOM05D005105 ORTHO05D006244 5.0e-22 108.2 139 43.9
Ah.03g148260 Amaranthus hybridus HOM05D005105 ORTHO05D006244 8.6e-22 107.5 125 43.2
A06p41600 Brassica napus HOM05D005105 ORTHO05D006244 1.1e-21 107.1 134 44.0
BraA06t27085Z Brassica rapa HOM05D005105 ORTHO05D006244 1.1e-21 107.1 134 44.0
Sed0022814 Sechium edule HOM05D005105 ORTHO05D006244 1.9e-21 106.3 141 46.1
Atru.chr6.2614 Acer truncatum HOM05D005105 ORTHO05D006244 4.3e-21 105.1 133 46.6
Sc09g0007730 Simmondsia chinensis HOM05D005105 ORTHO05D006244 1.2e-20 103.6 150 42.7
MELO3C025087.2 Cucumis melo HOM05D005105 ORTHO05D006244 1.6e-20 103.2 133 50.4
CsaV3_5G024330 Cucumis sativus L. HOM05D005105 ORTHO05D006244 1.6e-20 103.2 133 48.1
COL.COLO4_13307 Corchorus olitorius HOM05D005105 ORTHO05D006244 2.6e-18 95.9 120 47.5
Lsat_1_v5_gn_5_10960 Lactuca sativa HOM05D005105 ORTHO05D006244 2.2e-17 92.8 129 43.4
SHI04027 Sapria himalayana HOM05D005105 ORTHO05D006244 7.0e-16 87.8 160 37.5
ATR0582G106 Amborella trichopoda HOM05D005105 ORTHO05D006244 1.2e-15 87.0 73 58.9
DCAR_007509 Daucus carota HOM05D005105 ORTHO05D006244 4.6e-15 85.1 132 40.9
HanXRQChr05g0155591 Helianthus annuus HOM05D005105 ORTHO05D006244 4.6e-15 85.1 129 41.9
Lj5A92G45 Lonicera japonica HOM05D005105 ORTHO05D006244 6.0e-15 84.7 47 70.2
CDE06G1277 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 1.0e-14 84.0 102 45.1
HPP92_009897 Vanilla planifolia HOM05D005105 ORTHO05D006244 1.3e-14 83.6 65 55.4
HPP92_009881 Vanilla planifolia HOM05D005105 ORTHO05D006244 1.7e-14 83.2 65 55.4
vmacro19146 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 6.6e-14 81.3 193 33.2
Os11g0507400 Oryza sativa ssp. japonica HOM05D005105 ORTHO05D006244 1.9e-13 79.7 63 63.5
Glyma.19G097001 Glycine max HOM05D005105 ORTHO05D006244 7.3e-13 77.8 56 62.5
ECA246G1012 Erigeron canadensis HOM05D005105 ORTHO05D006244 1.1e-11 73.9 119 40.3
Pp3c21_14570 Physcomitrium patens HOM05D005105 ORTHO05D006244 4.9e-09 65.1 116 36.2
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis HOM05D005105 ORTHO05D006244 6.0e-07 58.2 63 42.9


User provided reference genes

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