Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33305 Davidia involucrata HOM05D006885 ORTHO05D008606 8.3e-38 159.8 79 100.0
Dinv25633 Davidia involucrata HOM05D006885 ORTHO05D008606 1.3e-30 136.0 81 85.2
Actinidia19564 Actinidia chinensis HOM05D006885 ORTHO05D008606 6.4e-30 133.7 77 84.4
Manes.04G090052 Manihot esculenta HOM05D006885 ORTHO05D008606 8.4e-30 133.3 76 86.8
Manes.11G080000 Manihot esculenta HOM05D006885 ORTHO05D008606 1.9e-29 132.1 80 83.8
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 1.6e-28 129.0 76 84.2
Sabra16G0207500 Salix brachista HOM05D006885 ORTHO05D008606 2.1e-28 128.6 82 79.3
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 2.7e-28 128.3 77 79.2
TAR629G2182 Trochodendron aralioides HOM05D006885 ORTHO05D008606 2.7e-28 128.3 83 79.5
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 4.6e-28 127.5 76 82.9
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla HOM05D006885 ORTHO05D008606 6.0e-28 127.1 67 89.6
RcHm_v2.0_Chr4g0429451 Rosa chinensis HOM05D006885 ORTHO05D008606 6.0e-28 127.1 67 91.0
Potri.001G325000 Populus trichocarpa HOM05D006885 ORTHO05D008606 1.0e-27 126.3 82 78.0
CiPaw.06G106900 Carya illinoinensis HOM05D006885 ORTHO05D008606 1.3e-27 125.9 75 82.7
Aqoxy5G03235 Aquilegia oxysepala HOM05D006885 ORTHO05D008606 2.3e-27 125.2 80 80.0
CiPaw.05G104600 Carya illinoinensis HOM05D006885 ORTHO05D008606 3.0e-27 124.8 75 81.3
Ciclev10033198m.g Citrus clementina HOM05D006885 ORTHO05D008606 3.9e-27 124.4 61 95.1
ECA232G0525 Erigeron canadensis HOM05D006885 ORTHO05D008606 3.9e-27 124.4 77 76.6
Cfa008736 Carpinus fangiana HOM05D000120 ORTHO05D000068 5.1e-27 124.0 76 81.6
FvH4_4g23120 Fragaria vesca HOM05D006885 ORTHO05D008606 1.5e-26 122.5 60 95.0
FAN07G1762 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.5e-26 122.5 60 95.0
FAN12G2334 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.5e-26 122.5 60 95.0
FAN17G2783 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.5e-26 122.5 60 95.0
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 1.5e-26 122.5 70 88.6
Prupe.1G220300 Prunus persica HOM05D006885 ORTHO05D008606 1.9e-26 122.1 77 77.9
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 2.5e-26 121.7 73 83.6
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.3e-26 121.3 70 87.1
ClCG06G001860 Citrullus lanatus HOM05D006885 ORTHO05D008606 4.3e-26 120.9 61 91.8
Eucgr.B03538 Eucalyptus grandis HOM05D006885 ORTHO05D008606 4.3e-26 120.9 76 80.3
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 4.3e-26 120.9 61 93.4
Nn2g15930 Nelumbo nucifera HOM05D006885 ORTHO05D008606 4.3e-26 120.9 64 89.1
CsaV3_6G007910 Cucumis sativus L. HOM05D006885 ORTHO05D008606 9.6e-26 119.8 71 83.1
MD13G1125100 Malus domestica HOM05D006885 ORTHO05D008606 9.6e-26 119.8 76 80.3
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 9.6e-26 119.8 61 91.8
TPR.G15605 Trifolium pratense HOM05D006885 ORTHO05D008606 1.2e-25 119.4 63 88.9
Atru.chr11.2397 Acer truncatum HOM05D006885 ORTHO05D008606 1.6e-25 119.0 72 84.7
Ca_06520_v3 Cicer arietinum L. HOM05D006885 ORTHO05D008606 2.1e-25 118.6 62 90.3
MD16G1125900 Malus domestica HOM05D006885 ORTHO05D008606 2.1e-25 118.6 76 77.6
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 2.1e-25 118.6 67 83.6
Sed0025765 Sechium edule HOM05D006885 ORTHO05D008606 2.1e-25 118.6 61 86.9
Lsat_1_v5_gn_4_1780 Lactuca sativa HOM05D006885 ORTHO05D008606 2.8e-25 118.2 67 82.1
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 3.6e-25 117.9 79 75.9
PGR119G0226 Punica granatum HOM05D006885 ORTHO05D008606 3.6e-25 117.9 62 88.7
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 4.7e-25 117.5 68 80.9
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 6.2e-25 117.1 64 85.9
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 8.1e-25 116.7 60 93.3
CANSAT01G1896 Cannabis sativa HOM05D006885 ORTHO05D008606 1.4e-24 115.9 68 83.8
DCAR_024641 Daucus carota HOM05D006885 ORTHO05D008606 4.0e-24 114.4 61 86.9
Psat0s1880g0200 Pisum sativum HOM05D006885 ORTHO05D008606 4.0e-24 114.4 64 84.4
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 4.0e-24 114.4 78 73.1
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 5.2e-24 114.0 61 85.2
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 5.2e-24 114.0 61 85.2
Medtr3g074700 Medicago truncatula HOM05D006885 ORTHO05D008606 5.2e-24 114.0 63 84.1
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 6.9e-24 113.6 63 85.7
LjContig00312_ERROPOS870357g0004846 Lotus japonicus HOM05D006885 ORTHO05D008606 6.9e-24 113.6 62 87.1
Glyma.08G361800 Glycine max HOM05D006885 ORTHO05D008606 9.0e-24 113.2 60 91.7
Cc11_g17420 Coffea canephora HOM05D006885 ORTHO05D008606 1.2e-23 112.8 65 83.1
Lj6A834T26 Lonicera japonica HOM05D006885 ORTHO05D008606 1.5e-23 112.5 63 82.5
Phvul.008G000900 Phaseolus vulgaris HOM05D006885 ORTHO05D008606 1.5e-23 112.5 63 85.7
PSO017G7113 Papaver somniferum HOM05D006885 ORTHO05D008606 2.0e-23 112.1 75 73.3
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 2.0e-23 112.1 61 86.9
unitig_26.g10421 Utricularia gibba HOM05D006885 ORTHO05D008606 2.6e-23 111.7 70 78.6
Haze_11752 Corylus avellana HOM05D006885 ORTHO05D008606 4.4e-23 110.9 109 58.7
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 9.9e-23 109.8 76 73.7
CARHR027030 Cardamine hirsuta HOM05D006885 ORTHO05D008606 9.9e-23 109.8 68 77.9
GSVIVG01000942001 Vitis vinifera HOM05D006885 ORTHO05D008606 1.7e-22 109.0 56 92.9
Thhalv10009236m.g Eutrema salsugineum HOM05D006885 ORTHO05D008606 2.2e-22 108.6 77 67.5
Glyma.18G300000 Glycine max HOM05D006885 ORTHO05D008606 3.8e-22 107.8 63 85.7
SalBow2G1383 Salvia bowleyana HOM05D006885 ORTHO05D008606 3.8e-22 107.8 79 69.6
THA.LOC104825479 Tarenaya hassleriana HOM05D006885 ORTHO05D008606 4.9e-22 107.5 58 86.2
Carub.0001s2598 Capsella rubella HOM05D006885 ORTHO05D008606 6.4e-22 107.1 69 76.8
Sp1g23670 Schrenkiella parvula HOM05D006885 ORTHO05D008606 1.9e-21 105.5 77 66.2
AT1G27435 Arabidopsis thaliana HOM05D006885 ORTHO05D008606 4.2e-21 104.4 68 75.0
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 4.2e-21 104.4 65 76.9
AL1G40850 Arabidopsis lyrata HOM05D006885 ORTHO05D008606 7.1e-21 103.6 56 85.7
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 7.1e-21 103.6 53 90.6
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 7.1e-21 103.6 53 90.6
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 7.1e-21 103.6 53 90.6
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 7.1e-21 103.6 53 90.6
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 7.1e-21 103.6 53 90.6
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 7.1e-21 103.6 53 90.6
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 7.1e-21 103.6 53 90.6
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 1.6e-20 102.4 53 88.7
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 1.6e-20 102.4 53 88.7
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 1.6e-20 102.4 53 88.7
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 1.6e-20 102.4 53 88.7
Lalb_Chr10g0091171 Lupinus albus HOM05D006885 ORTHO05D008606 1.6e-20 102.4 55 89.1
HPP92_021686 Vanilla planifolia HOM05D006885 ORTHO05D008606 1.6e-20 102.4 64 71.9
CDE05G1244 Ceratophyllum demersum HOM05D006885 ORTHO05D008606 1.0e-19 99.8 63 77.8
HPP92_021628 Vanilla planifolia HOM05D006885 ORTHO05D008606 1.3e-19 99.4 64 70.3
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 5.1e-19 97.4 52 88.5
SHI04153 Sapria himalayana HOM05D006885 ORTHO05D008606 5.1e-19 97.4 69 72.5
ATR0582G111 Amborella trichopoda HOM05D006885 ORTHO05D008606 6.6e-19 97.1 62 80.6
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 6.6e-19 97.1 47 97.9
SGA_v2.0_scaffold9G04792 Striga asiatica HOM05D006885 ORTHO05D008606 1.9e-18 95.5 91 56.0
CSS0038255 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 2.5e-18 95.1 46 97.8
MBI12_g28748_MAGBIO Magnolia biondii HOM05D006885 ORTHO05D008606 2.5e-18 95.1 61 80.3
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 9.6e-18 93.2 52 86.5
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 9.6e-18 93.2 61 73.8
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 2.8e-17 91.7 46 91.3
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 4.8e-17 90.9 46 89.1
Zm00001eb133070 Zea mays HOM05D006885 ORTHO05D008606 4.8e-17 90.9 69 63.8
MELO3C035240.2 Cucumis melo HOM05D006885 ORTHO05D008606 6.2e-17 90.5 63 73.0
Zm00001eb408880 Zea mays HOM05D006885 ORTHO05D008606 1.8e-16 89.0 68 63.2
Sc11g0000250 Simmondsia chinensis HOM05D006885 ORTHO05D008606 2.4e-16 88.6 42 97.6
HanXRQChr03g0067371 Helianthus annuus HOM05D006885 ORTHO05D008606 2.6e-15 85.1 44 88.6
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 4.2e-13 77.8 149 39.6
Gorai.001G210600 Gossypium raimondii HOM05D006885 ORTHO05D008606 9.3e-13 76.6 43 83.7
Gohir.D07G189020 Gossypium hirsutum HOM05D006885 ORTHO05D008606 2.7e-12 75.1 43 81.4
Pp3c6_10000 Physcomitrium patens HOM05D006885 ORTHO05D008606 3.0e-11 71.6 63 61.9
Gohir.A06G101502 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.6e-09 65.9 43 69.8
Gohir.D02G113400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.7e-09 64.7 33 87.9
Gorai.005G128300 Gossypium raimondii HOM05D006885 ORTHO05D008606 3.7e-09 64.7 33 87.9
TPR.G7690 Trifolium pratense HOM05D006885 ORTHO05D008606 1.4e-08 62.8 28 96.4
Mapoly0027s0032 Marchantia polymorpha HOM05D006885 ORTHO05D008606 2.6e-07 58.5 58 60.3
AagrBONN_evm.TU.Sc2ySwM_362.2152 Anthoceros agrestis HOM05D006885 ORTHO05D008606 7.6e-07 57.0 57 56.1


User provided reference genes

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