Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 6.1e-152 540.8 276 100.0
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 1.6e-107 393.3 272 77.2
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 2.1e-104 382.9 276 76.1
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 8.0e-104 380.9 276 75.4
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 6.8e-103 377.9 248 79.4
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 7.5e-102 374.4 277 74.7
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 1.3e-101 373.6 270 74.4
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 1.7e-101 373.2 271 74.2
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 4.9e-101 371.7 272 74.3
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 4.9e-101 371.7 280 74.6
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 6.4e-101 371.3 267 78.3
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 1.4e-100 370.2 268 73.9
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 1.4e-100 370.2 239 82.0
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 7.0e-100 367.9 275 71.6
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 1.6e-99 366.7 289 70.9
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 4.6e-99 365.2 272 74.3
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 1.3e-98 363.6 266 77.4
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 1.9e-97 359.8 278 70.1
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 1.9e-97 359.8 278 70.1
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 5.6e-97 358.2 277 73.6
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 1.6e-96 356.7 271 70.8
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 1.6e-96 356.7 286 71.0
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 2.8e-96 355.9 274 71.2
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 2.8e-96 355.9 270 70.7
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 3.6e-96 355.5 286 71.0
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 6.2e-96 354.8 267 72.7
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 6.2e-96 354.8 279 69.9
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 1.8e-95 353.2 232 81.5
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 1.8e-95 353.2 270 72.6
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 2.3e-95 352.8 233 79.4
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 8.9e-95 350.9 270 71.9
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 1.2e-94 350.5 267 73.0
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 2.0e-94 349.7 254 75.6
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 3.4e-94 349.0 261 75.5
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 5.8e-94 348.2 229 77.3
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.7e-93 346.7 268 72.4
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 1.7e-93 346.7 261 72.0
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 1.7e-93 346.7 214 83.6
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 2.2e-93 346.3 305 66.6
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 3.7e-93 345.5 272 69.5
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 8.3e-93 344.4 282 67.7
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 3.2e-92 342.4 269 71.4
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 1.2e-91 340.5 214 82.7
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.2e-91 340.5 269 71.0
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.7e-91 339.3 270 69.6
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 3.5e-91 339.0 254 73.2
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 4.6e-91 338.6 275 68.4
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 4.6e-91 338.6 277 66.4
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 7.8e-91 337.8 270 70.0
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 3.0e-90 335.9 187 89.8
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 3.0e-90 335.9 231 75.3
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 3.0e-90 335.9 232 75.9
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 6.6e-90 334.7 277 67.1
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 6.6e-90 334.7 278 68.3
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 8.6e-90 334.3 239 75.7
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 1.5e-89 333.6 282 68.1
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 2.5e-89 332.8 244 72.1
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 3.3e-89 332.4 271 69.0
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 3.3e-89 332.4 207 83.6
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 4.3e-89 332.0 203 85.2
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 5.6e-89 331.6 249 73.1
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 5.6e-89 331.6 188 88.8
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 7.3e-89 331.3 268 68.7
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 7.3e-89 331.3 209 79.9
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 1.2e-88 330.5 268 68.7
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 1.2e-88 330.5 268 68.7
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 6.2e-88 328.2 210 77.6
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 8.1e-88 327.8 250 70.8
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 1.1e-87 327.4 263 67.3
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 1.4e-87 327.0 192 88.5
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.8e-87 326.6 263 67.7
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 1.8e-87 326.6 246 71.5
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 3.1e-87 325.9 218 77.1
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 4.0e-87 325.5 245 71.0
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 4.0e-87 325.5 202 82.7
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 5.2e-87 325.1 251 69.7
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 6.8e-87 324.7 268 67.2
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 2.0e-86 323.2 232 73.3
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 2.6e-86 322.8 242 71.5
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 2.6e-86 322.8 233 73.0
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 3.4e-86 322.4 245 70.6
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 3.4e-86 322.4 200 84.5
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 4.4e-86 322.0 251 68.9
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 7.6e-86 321.2 292 66.4
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 7.6e-86 321.2 186 84.4
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 1.3e-85 320.5 290 64.8
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 1.3e-85 320.5 272 67.6
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 2.2e-85 319.7 241 72.2
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 2.9e-85 319.3 254 67.7
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 3.8e-85 318.9 263 66.2
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 6.4e-85 318.2 192 86.5
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 3.5e-83 312.4 270 64.1
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 6.0e-83 311.6 249 68.7
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 5.1e-82 308.5 279 62.7
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 4.3e-81 305.4 220 72.3
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 7.3e-81 304.7 296 62.2
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 8.1e-80 301.2 187 81.8
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 6.9e-79 298.1 278 61.9
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 6.9e-79 298.1 190 76.8
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 2.6e-78 296.2 185 78.9
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 2.7e-75 286.2 213 71.4
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 2.4e-71 273.1 195 67.7
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 1.7e-69 266.9 206 69.9
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 1.6e-67 260.4 188 66.0
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 3.7e-64 249.2 207 62.3
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 3.4e-62 242.7 275 54.2
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 1.7e-61 240.4 203 59.1
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 1.1e-60 237.7 207 67.6
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 6.2e-56 221.9 147 77.6
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 6.9e-55 218.4 208 61.1
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 2.2e-48 196.8 196 50.5
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 1.1e-47 194.5 210 52.9
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 4.1e-47 192.6 110 84.5
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 1.5e-46 190.7 199 50.8
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 9.4e-44 181.4 134 68.7
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 2.1e-43 180.3 110 76.4
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 2.1e-35 153.7 188 44.1
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.0e-33 147.1 151 61.6
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 9.7e-25 118.2 82 70.7
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 1.2e-14 84.7 109 51.4
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 2.7e-14 83.6 49 81.6
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 2.9e-13 80.1 93 53.8
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 1.5e-09 67.8 44 72.7
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 2.0e-09 67.4 44 68.2
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 5.4e-07 59.3 65 53.8


User provided reference genes

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