Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33274 Davidia involucrata HOM05D004735 ORTHO05D005243 5.4e-101 370.9 178 100.0
Dinv25616 Davidia involucrata HOM05D004735 ORTHO05D005243 1.1e-74 283.5 168 83.3
Hma1.2p1_0421F.1_g149860 Hydrangea macrophylla HOM05D004735 ORTHO05D005243 2.1e-65 252.7 168 73.8
Actinidia37716 Actinidia chinensis HOM05D004735 ORTHO05D005243 1.6e-60 236.5 169 69.8
CSS0022550 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 1.9e-53 213.0 176 65.3
CiPaw.03G001400 Carya illinoinensis HOM05D004735 ORTHO05D005243 8.7e-51 204.1 167 58.7
Cfa007143 Carpinus fangiana HOM05D004735 ORTHO05D005243 1.5e-50 203.4 167 58.7
RcHm_v2.0_Chr2g0176561 Rosa chinensis HOM05D004735 ORTHO05D005243 4.3e-50 201.8 167 58.1
Haze_14980 Corylus avellana HOM05D004735 ORTHO05D005243 9.6e-50 200.7 167 58.1
QL02p069299 Quercus lobata HOM05D004735 ORTHO05D005243 9.6e-50 200.7 169 60.9
Lj7A617T74 Lonicera japonica HOM05D004735 ORTHO05D005243 2.4e-48 196.1 179 58.7
Prupe.3G314000 Prunus persica HOM05D004735 ORTHO05D005243 4.0e-48 195.3 167 56.3
Cc07_g01360 Coffea canephora HOM05D004735 ORTHO05D005243 3.4e-47 192.2 173 57.2
Duzib187G1028 Durio zibethinus HOM05D004735 ORTHO05D005243 8.4e-46 187.6 173 57.2
FAN02G4354 Fragaria x ananassa HOM05D004735 ORTHO05D005243 8.4e-46 187.6 167 54.5
FAN09G0836 Fragaria x ananassa HOM05D004735 ORTHO05D005243 1.9e-45 186.4 167 53.9
FAN14G4878 Fragaria x ananassa HOM05D004735 ORTHO05D005243 1.9e-45 186.4 167 53.9
FAN05G2416 Fragaria x ananassa HOM05D004735 ORTHO05D005243 2.4e-45 186.0 167 53.3
MD17G1006400 Malus domestica HOM05D004735 ORTHO05D005243 2.4e-45 186.0 167 54.5
Cpa.g.sc70.59 Carica papaya HOM05D004735 ORTHO05D005243 1.6e-44 183.3 168 53.6
FvH4_6g54340 Fragaria vesca HOM05D004735 ORTHO05D005243 2.1e-44 183.0 167 53.3
TWI32G0607 Tripterygium wilfordii HOM05D004735 ORTHO05D005243 2.1e-44 183.0 176 53.4
Duzib264G0086 Durio zibethinus HOM05D004735 ORTHO05D005243 3.5e-44 182.2 170 54.7
Rhsim08G0038800 Rhododendron simsii HOM05D004735 ORTHO05D005243 4.6e-44 181.8 169 57.4
vmacro18383 Vaccinium macrocarpon HOM05D004735 ORTHO05D005243 6.0e-44 181.4 169 58.0
Thecc.04G048500 Theobroma cacao HOM05D004735 ORTHO05D005243 3.9e-43 178.7 170 54.7
CiPaw.04G001000 Carya illinoinensis HOM05D004735 ORTHO05D005243 2.5e-42 176.0 169 52.7
Duzib147G0188 Durio zibethinus HOM05D004735 ORTHO05D005243 4.3e-42 175.3 170 54.1
Ciclev10014280m.g Citrus clementina HOM05D004735 ORTHO05D005243 1.3e-41 173.7 167 50.3
COL.COLO4_13380 Corchorus olitorius HOM05D004735 ORTHO05D005243 1.6e-41 173.3 171 53.2
Peaxi162Scf00420g00844 Petunia axillaris HOM05D004735 ORTHO05D005243 2.1e-41 172.9 168 52.4
CAN.G473.160 Capsicum annuum HOM05D004735 ORTHO05D005243 3.7e-41 172.2 168 51.2
Manes.11G076100 Manihot esculenta HOM05D004735 ORTHO05D005243 2.4e-40 169.5 163 53.4
Nitab4.5_0000519g0300 Nicotiana tabacum HOM05D004735 ORTHO05D005243 6.9e-40 167.9 168 50.6
Eucgr.G01927 Eucalyptus grandis HOM05D004735 ORTHO05D005243 1.2e-39 167.2 168 49.4
Nitab4.5_0002172g0170 Nicotiana tabacum HOM05D004735 ORTHO05D005243 2.6e-39 166.0 167 50.3
TAR629G0422 Trochodendron aralioides HOM05D004735 ORTHO05D005243 2.6e-39 166.0 171 50.3
Sopen02g039210 Solanum pennellii HOM05D004735 ORTHO05D005243 4.5e-39 165.2 168 50.6
MD09G1002200 Malus domestica HOM05D004735 ORTHO05D005243 1.0e-38 164.1 167 50.3
PGSC0003DMG400020237 Solanum tuberosum HOM05D004735 ORTHO05D005243 1.0e-38 164.1 168 50.0
Nn4g22117 Nelumbo nucifera HOM05D004735 ORTHO05D005243 1.3e-38 163.7 169 49.7
Potri.002G237800 Populus trichocarpa HOM05D004735 ORTHO05D005243 2.9e-38 162.5 184 48.4
Atru.chr6.2700 Acer truncatum HOM05D004735 ORTHO05D005243 3.8e-38 162.2 173 49.7
Solyc02g094540.4 Solanum lycopersicum HOM05D004735 ORTHO05D005243 6.5e-38 161.4 168 50.0
Sabra02G0181300 Salix brachista HOM05D004735 ORTHO05D005243 3.2e-37 159.1 185 48.1
Manes.04G093600 Manihot esculenta HOM05D004735 ORTHO05D005243 7.1e-37 157.9 167 47.9
Gohir.A11G063900 Gossypium hirsutum HOM05D004735 ORTHO05D005243 2.1e-36 156.4 186 47.3
TWI60G1686 Tripterygium wilfordii HOM05D004735 ORTHO05D005243 2.1e-36 156.4 168 49.4
Potri.014G144100 Populus trichocarpa HOM05D004735 ORTHO05D005243 1.0e-35 154.1 184 46.7
Gorai.007G073000 Gossypium raimondii HOM05D004735 ORTHO05D005243 1.3e-35 153.7 186 46.2
Sabra14G0108800 Salix brachista HOM05D004735 ORTHO05D005243 1.3e-35 153.7 184 46.7
Psat3g093080 Pisum sativum HOM05D004735 ORTHO05D005243 2.3e-35 152.9 167 44.3
Gohir.D11G068200 Gossypium hirsutum HOM05D004735 ORTHO05D005243 3.0e-35 152.5 186 46.2
CANSAT64G0702 Cannabis sativa HOM05D004735 ORTHO05D005243 5.7e-34 148.3 172 45.9
AUR62038220 Chenopodium quinoa HOM05D004735 ORTHO05D005243 1.6e-33 146.7 171 47.4
VMungo0464G0888 Vigna mungo HOM05D004735 ORTHO05D005243 2.8e-33 146.0 195 38.5
EL10Ac3g06356 Beta vulgaris HOM05D004735 ORTHO05D005243 3.7e-33 145.6 170 48.2
Psat0s787g0080 Pisum sativum HOM05D004735 ORTHO05D005243 6.3e-33 144.8 170 41.8
AUR62030086 Chenopodium quinoa HOM05D004735 ORTHO05D005243 1.1e-32 144.1 172 47.1
Lalb_Chr21g0316971 Lupinus albus HOM05D004735 ORTHO05D005243 1.8e-32 143.3 177 40.1
Gohir.D10G081300 Gossypium hirsutum HOM05D004735 ORTHO05D005243 4.1e-32 142.1 170 47.6
Gorai.011G088500 Gossypium raimondii HOM05D004735 ORTHO05D005243 4.1e-32 142.1 170 47.6
Lalb_Chr02g0156851 Lupinus albus HOM05D004735 ORTHO05D005243 9.0e-32 141.0 174 41.4
Ca_08203_v3 Cicer arietinum L. HOM05D004735 ORTHO05D005243 3.4e-31 139.0 171 40.9
Oeu035383.1 Olea europaea HOM05D004735 ORTHO05D005243 4.5e-31 138.7 168 48.2
Hund12196 Selenicereus undatus HOM05D004735 ORTHO05D005243 4.5e-31 138.7 170 46.5
Ah.13g074210 Amaranthus hybridus HOM05D004735 ORTHO05D005243 1.0e-30 137.5 161 46.6
MSTRG.24121 Avicennia marina HOM05D004735 ORTHO05D005243 1.0e-30 137.5 166 43.4
Medtr7g084170 Medicago truncatula HOM05D004735 ORTHO05D005243 2.2e-30 136.3 172 39.5
Gohir.A10G069900 Gossypium hirsutum HOM05D004735 ORTHO05D005243 3.8e-30 135.6 170 46.5
Ca_16589_v3 Cicer arietinum L. HOM05D004735 ORTHO05D005243 1.4e-29 133.7 171 40.4
ClCG01G007860 Citrullus lanatus HOM05D004735 ORTHO05D005243 1.4e-29 133.7 174 44.3
SalBow4G2972 Salvia bowleyana HOM05D004735 ORTHO05D005243 2.5e-29 132.9 172 48.3
Lj2g0010549 Lotus japonicus HOM05D004735 ORTHO05D005243 5.5e-29 131.7 189 37.0
arahy.Tifrunner.gnm1.ann1.HAHJ6R Arachis hypogaea HOM05D004735 ORTHO05D005243 4.6e-28 128.6 172 38.4
arahy.Tifrunner.gnm1.ann1.X964XN Arachis hypogaea HOM05D004735 ORTHO05D005243 7.9e-28 127.9 172 38.4
CsaV3_5G024940 Cucumis sativus L. HOM05D004735 ORTHO05D005243 7.9e-28 127.9 176 44.3
MELO3C005100.2 Cucumis melo HOM05D004735 ORTHO05D005243 1.0e-27 127.5 176 43.2
Sed0022562 Sechium edule HOM05D004735 ORTHO05D005243 1.3e-27 127.1 169 42.0
Sc03g0005270 Simmondsia chinensis HOM05D004735 ORTHO05D005243 1.8e-27 126.7 176 44.3
Lj1g0021966 Lotus japonicus HOM05D004735 ORTHO05D005243 3.0e-27 125.9 175 38.3
Lalb_Chr22g0359831 Lupinus albus HOM05D004735 ORTHO05D005243 3.9e-27 125.6 168 37.5
Oeu035273.1 Olea europaea HOM05D004735 ORTHO05D005243 5.1e-27 125.2 191 38.7
Glyma.16G147800 Glycine max HOM05D004735 ORTHO05D005243 6.7e-27 124.8 150 40.7
Medtr6g033235 Medicago truncatula HOM05D004735 ORTHO05D005243 8.8e-27 124.4 165 37.6
DCAR_014465 Daucus carota HOM05D004735 ORTHO05D005243 1.9e-26 123.2 177 43.5
Glyma.02G066700 Glycine max HOM05D004735 ORTHO05D005243 1.7e-25 120.2 172 38.4
TPR.G30897 Trifolium pratense HOM05D004735 ORTHO05D005243 1.4e-24 117.1 186 34.9
Phvul.004G069600 Phaseolus vulgaris HOM05D004735 ORTHO05D005243 5.3e-24 115.2 209 32.1
TPR.G15417 Trifolium pratense HOM05D004735 ORTHO05D005243 3.8e-22 109.0 213 31.5
Ah.07g203970 Amaranthus hybridus HOM05D004735 ORTHO05D005243 1.4e-21 107.1 169 42.6
Migut.F00010 Erythranthe guttata HOM05D004735 ORTHO05D005243 7.2e-21 104.8 170 44.7
PSO478G1205 Papaver somniferum HOM05D004735 ORTHO05D005243 8.8e-19 97.8 183 34.4
Lsat_1_v5_gn_3_104900 Lactuca sativa HOM05D004735 ORTHO05D005243 1.5e-18 97.1 158 42.4
PSO017G6705 Papaver somniferum HOM05D004735 ORTHO05D005243 4.4e-18 95.5 183 34.4
THA.LOC104802362 Tarenaya hassleriana HOM05D004735 ORTHO05D005243 4.8e-17 92.0 169 36.1
ECA246G4565 Erigeron canadensis HOM05D004735 ORTHO05D005243 6.9e-16 88.2 168 41.1
GSVIVG01032979001 Vitis vinifera HOM05D004735 ORTHO05D005243 3.8e-14 82.4 54 66.7
AL6G24610 Arabidopsis lyrata HOM05D004735 ORTHO05D005243 4.2e-13 79.0 165 34.5
Aa31LG11G15430 Aethionema arabicum HOM05D004735 ORTHO05D005243 3.6e-12 75.9 166 30.7
AT5G13950 Arabidopsis thaliana HOM05D004735 ORTHO05D005243 6.1e-12 75.1 163 33.7
Thhalv10012594m.g Eutrema salsugineum HOM05D004735 ORTHO05D005243 1.8e-11 73.6 163 31.3
Sp6g30050 Schrenkiella parvula HOM05D004735 ORTHO05D005243 1.8e-11 73.6 163 32.5
THA.LOC104821139 Tarenaya hassleriana HOM05D004735 ORTHO05D005243 1.8e-11 73.6 170 29.4
BcaC04g19065 Brassica carinata HOM05D004735 ORTHO05D005243 3.9e-11 72.4 184 31.5
BolC9t59152H Brassica oleracea HOM05D004735 ORTHO05D005243 3.9e-11 72.4 184 31.5
HanXRQChr15g0475721 Helianthus annuus HOM05D004735 ORTHO05D005243 3.9e-11 72.4 172 35.5
Carub.0006s1214 Capsella rubella HOM05D004735 ORTHO05D005243 1.5e-10 70.5 164 31.7
C09p63170 Brassica napus HOM05D004735 ORTHO05D005243 2.0e-10 70.1 184 31.0
PGR042G1405 Punica granatum HOM05D004735 ORTHO05D005243 1.7e-09 67.0 155 37.4
A10p24440 Brassica napus HOM05D004735 ORTHO05D005243 3.7e-09 65.9 182 31.3
BraA10t44508Z Brassica rapa HOM05D000139 ORTHO05D005243 3.7e-09 65.9 182 31.3
unitig_0.g1643 Utricularia gibba HOM05D004735 ORTHO05D005243 3.7e-09 65.9 142 29.6
Oeu062522.1 Olea europaea HOM05D004735 ORTHO05D005243 7.0e-08 61.6 126 34.9
C03p07280 Brassica napus HOM05D004735 ORTHO05D005243 5.9e-07 58.5 163 35.0
BcaB01g05325 Brassica carinata HOM05D004735 ORTHO05D005243 7.7e-07 58.2 163 34.4
BolC3t13230H Brassica oleracea HOM05D004735 ORTHO05D005243 7.7e-07 58.2 163 34.4
A03p06300 Brassica napus HOM05D004735 ORTHO05D005243 2.2e-06 56.6 154 31.2
BraA03t09961Z Brassica rapa HOM05D004735 ORTHO05D005243 2.2e-06 56.6 154 31.2


User provided reference genes

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