Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33247 Davidia involucrata HOM05D006746 ORTHO05D007812 6.3e-202 707.2 354 100.0
Actinidia18395 Actinidia chinensis HOM05D006746 ORTHO05D007812 1.1e-137 493.8 345 71.6
Hma1.2p1_0108F.1_g052140 Hydrangea macrophylla HOM05D006746 ORTHO05D007812 3.2e-137 492.3 346 73.7
CSS0002331 Camellia sinensis var. sinensis HOM05D006746 ORTHO05D007812 5.1e-135 485.0 344 70.9
CiPaw.02G124900 Carya illinoinensis HOM05D006746 ORTHO05D007812 9.9e-131 470.7 344 66.9
QL10p064455 Quercus lobata HOM05D006746 ORTHO05D007812 5.4e-129 464.9 345 66.7
TAR636G2588 Trochodendron aralioides HOM05D006746 ORTHO05D007812 5.1e-127 458.4 347 64.6
QL10p064381 Quercus lobata HOM05D006746 ORTHO05D007812 2.5e-126 456.1 342 66.1
GSVIVG01038252001 Vitis vinifera HOM05D006746 ORTHO05D007812 2.0e-123 446.4 344 66.3
PGSC0003DMG400025215 Solanum tuberosum HOM05D006746 ORTHO05D007812 3.3e-118 429.1 345 61.7
Nn1g09428 Nelumbo nucifera HOM05D006746 ORTHO05D007812 1.6e-117 426.8 349 60.2
Cfa008516 Carpinus fangiana HOM05D006746 ORTHO05D007812 4.0e-116 422.2 282 72.3
CAN.G607.8 Capsicum annuum HOM05D006746 ORTHO05D007812 3.8e-114 415.6 345 60.9
Solyc08g015630.3 Solanum lycopersicum HOM05D006746 ORTHO05D007812 3.8e-114 415.6 345 61.2
Sopen08g005630 Solanum pennellii HOM05D006746 ORTHO05D007812 6.4e-114 414.8 345 60.9
Prupe.7G270000 Prunus persica HOM05D006746 ORTHO05D007812 3.2e-113 412.5 355 59.7
RcHm_v2.0_Chr2g0084491 Rosa chinensis HOM05D006746 ORTHO05D007812 2.3e-111 406.4 343 60.3
Haze_11128 Corylus avellana HOM05D006746 ORTHO05D007812 5.6e-110 401.7 351 61.8
FAN28G2345 Fragaria x ananassa HOM05D006746 ORTHO05D007812 6.2e-109 398.3 345 59.4
Peaxi162Scf01205g00172 Petunia axillaris HOM05D006746 ORTHO05D007812 1.8e-108 396.7 345 59.1
MSTRG.364 Avicennia marina HOM05D006746 ORTHO05D007812 1.0e-106 391.0 350 57.4
Migut.F01782 Erythranthe guttata HOM05D006746 ORTHO05D007812 1.3e-106 390.6 350 60.0
PSO675G5098 Papaver somniferum HOM05D006746 ORTHO05D007812 1.7e-106 390.2 344 55.8
DCAR_024795 Daucus carota HOM05D006746 ORTHO05D007812 2.2e-106 389.8 342 58.5
Aqoxy2G01227 Aquilegia oxysepala HOM05D006746 ORTHO05D007812 1.1e-105 387.5 344 59.0
TWI15G0215 Tripterygium wilfordii HOM05D006746 ORTHO05D007812 2.5e-105 386.3 343 58.6
PSO732G0193 Papaver somniferum HOM05D006746 ORTHO05D007812 3.5e-104 382.5 344 55.2
Sc13g0007590 Simmondsia chinensis HOM05D006746 ORTHO05D007812 4.3e-102 375.6 345 56.5
Lsat_1_v5_gn_4_139881 Lactuca sativa HOM05D006746 ORTHO05D007812 2.2e-101 373.2 342 56.1
SalBow3G0778 Salvia bowleyana HOM05D006746 ORTHO05D007812 2.2e-101 373.2 346 56.4
Sabra17G0008400 Salix brachista HOM05D006746 ORTHO05D007812 2.8e-101 372.9 342 56.1
Duzib128G1730 Durio zibethinus HOM05D006746 ORTHO05D007812 4.8e-101 372.1 346 56.4
CANSAT54G1618 Cannabis sativa HOM05D006746 ORTHO05D007812 8.2e-101 371.3 346 55.8
Gorai.011G224600 Gossypium raimondii HOM05D006746 ORTHO05D007812 3.1e-100 369.4 346 56.6
Ciclev10019447m.g Citrus clementina HOM05D006746 ORTHO05D007812 1.5e-99 367.1 355 57.7
MD15G1143000 Malus domestica HOM05D006746 ORTHO05D007812 2.0e-99 366.7 305 60.0
Potri.017G007500 Populus trichocarpa HOM05D006746 ORTHO05D007812 2.0e-99 366.7 343 56.6
Gohir.D10G200400 Gossypium hirsutum HOM05D006746 ORTHO05D007812 2.6e-99 366.3 346 56.4
Sed0026330 Sechium edule HOM05D006746 ORTHO05D007812 2.9e-98 362.8 343 56.0
Thecc.05G001600 Theobroma cacao HOM05D006746 ORTHO05D007812 3.8e-98 362.5 345 56.2
Lju470C3G4 Lonicera japonica HOM05D006746 ORTHO05D007812 5.0e-98 362.1 394 52.5
Gohir.A10G192500 Gossypium hirsutum HOM05D006746 ORTHO05D007812 1.9e-97 360.1 346 55.2
HanXRQChr15g0495931 Helianthus annuus HOM05D006746 ORTHO05D007812 2.7e-96 356.3 344 55.5
CsaV3_7G007200 Cucumis sativus L. HOM05D006746 ORTHO05D007812 6.1e-96 355.1 342 55.3
MELO3C018577.2 Cucumis melo HOM05D006746 ORTHO05D007812 1.1e-94 350.9 342 54.7
Glyma.11G218500 Glycine max HOM05D006746 ORTHO05D007812 9.7e-94 347.8 347 52.7
Lalb_Chr15g0084751 Lupinus albus HOM05D006746 ORTHO05D007812 1.7e-93 347.1 345 53.9
AUR62023707 Chenopodium quinoa HOM05D006746 ORTHO05D007812 8.2e-93 344.7 346 52.0
Glyma.18G038800 Glycine max HOM05D006746 ORTHO05D007812 3.1e-92 342.8 347 52.2
Lj4g0012651 Lotus japonicus HOM05D006746 ORTHO05D007812 6.9e-92 341.7 347 52.2
Hund22598 Selenicereus undatus HOM05D006746 ORTHO05D007812 6.9e-92 341.7 348 51.7
SGA_v2.0_scaffold71G24025 Striga asiatica HOM05D006746 ORTHO05D007812 2.6e-91 339.7 386 49.0
Ah.13g073160 Amaranthus hybridus HOM05D006746 ORTHO05D007812 5.9e-91 338.6 344 51.5
Phvul.001G232000 Phaseolus vulgaris HOM05D006746 ORTHO05D007812 2.2e-90 336.7 346 52.6
Ca_08165_v3 Cicer arietinum L. HOM05D006746 ORTHO05D007812 1.1e-89 334.3 349 52.7
TPR.G15849 Trifolium pratense HOM05D006746 ORTHO05D007812 1.9e-89 333.6 348 51.4
AUR62002485 Chenopodium quinoa HOM05D006746 ORTHO05D007812 2.5e-89 333.2 346 50.9
Manes.01G009900 Manihot esculenta HOM05D006746 ORTHO05D007812 4.2e-89 332.4 288 57.6
Nitab4.5_0002395g0070 Nicotiana tabacum HOM05D006746 ORTHO05D007812 7.2e-89 331.6 347 51.6
Eucgr.L02782 Eucalyptus grandis HOM05D006746 ORTHO05D007812 1.6e-88 330.5 343 50.4
ATR0743G246 Amborella trichopoda HOM05D006746 ORTHO05D007812 4.7e-88 328.9 346 47.1
Psat0s3469g0080 Pisum sativum HOM05D006746 ORTHO05D007812 1.0e-87 327.8 350 50.9
arahy.Tifrunner.gnm1.ann1.40HSEN Arachis hypogaea HOM05D006746 ORTHO05D007812 1.8e-87 327.0 347 52.2
arahy.Tifrunner.gnm1.ann1.33LTA3 Arachis hypogaea HOM05D006746 ORTHO05D007812 5.1e-87 325.5 347 51.9
Medtr3g067725 Medicago truncatula HOM05D006746 ORTHO05D007812 5.1e-87 325.5 350 52.0
VMungo1383G0626 Vigna mungo HOM05D006746 ORTHO05D007812 8.8e-87 324.7 346 51.4
FvH4_1g00201 Fragaria vesca HOM05D006746 ORTHO05D007812 9.7e-86 321.2 244 64.3
FAN26G2233 Fragaria x ananassa HOM05D001906 ORTHO05D007812 2.2e-85 320.1 302 54.3
FAN26G2252 Fragaria x ananassa HOM05D001906 ORTHO05D007812 2.2e-85 320.1 302 54.3
THA.LOC104802347 Tarenaya hassleriana HOM05D006746 ORTHO05D007812 6.3e-85 318.5 346 51.4
Aa31LG1G25670 Aethionema arabicum HOM05D006746 ORTHO05D007812 1.1e-84 317.8 341 52.5
arahy.Tifrunner.gnm1.ann1.LQ4NH4 Arachis hypogaea HOM05D006746 ORTHO05D007812 3.1e-84 316.2 346 51.2
Eucgr.A00429 Eucalyptus grandis HOM05D006746 ORTHO05D007812 4.1e-84 315.8 417 42.9
Carub.0004s2654 Capsella rubella HOM05D006746 ORTHO05D007812 2.6e-83 313.2 347 49.9
AL4G42860 Arabidopsis lyrata HOM05D006746 ORTHO05D007812 1.3e-82 310.8 341 50.1
AT2G43980 Arabidopsis thaliana HOM05D006746 ORTHO05D007812 2.2e-82 310.1 341 50.1
arahy.Tifrunner.gnm1.ann1.AQI9IU Arachis hypogaea HOM05D006746 ORTHO05D007812 2.9e-82 309.7 346 50.0
Sp4g26070 Schrenkiella parvula HOM05D006746 ORTHO05D007812 8.5e-82 308.1 341 50.7
A05p04130 Brassica napus HOM05D006746 ORTHO05D007812 3.2e-81 306.2 340 50.3
CARHR139150 Cardamine hirsuta HOM05D006746 ORTHO05D007812 4.2e-81 305.8 344 49.1
Rhsim09G0003500 Rhododendron simsii HOM05D006746 ORTHO05D007812 9.4e-81 304.7 180 80.0
Os09g0518700 Oryza sativa ssp. japonica HOM05D006746 ORTHO05D007812 1.2e-80 304.3 351 48.7
BraA05t19399Z Brassica rapa HOM05D006746 ORTHO05D007812 2.7e-80 303.1 340 50.0
C04p04900 Brassica napus HOM05D006746 ORTHO05D007812 1.4e-79 300.8 340 48.5
BcaC02g12348 Brassica carinata HOM05D006746 ORTHO05D007812 6.7e-79 298.5 345 49.3
BolC4t22120H Brassica oleracea HOM05D006746 ORTHO05D007812 5.7e-78 295.4 340 49.4
EL10Ac3g06170 Beta vulgaris HOM05D006746 ORTHO05D007812 3.7e-77 292.7 334 47.0
Thhalv10001421m.g Eutrema salsugineum HOM05D006746 ORTHO05D007812 4.8e-77 292.4 341 49.3
COL.COLO4_28973 Corchorus olitorius HOM05D006746 ORTHO05D007812 4.1e-76 289.3 344 48.8
Nitab4.5_0000013g0050 Nicotiana tabacum HOM05D006746 ORTHO05D007812 4.5e-75 285.8 346 47.7
Oeu007388.1 Olea europaea HOM05D006746 ORTHO05D007812 6.7e-71 271.9 175 74.3
vmacro05599 Vaccinium macrocarpon HOM05D006746 ORTHO05D007812 5.7e-70 268.9 219 61.2
Cc03_g15960 Coffea canephora HOM05D006746 ORTHO05D007812 2.7e-67 260.0 175 70.9
HPP92_025331 Vanilla planifolia HOM05D006746 ORTHO05D007812 2.9e-66 256.5 330 44.2
ECA232G4866 Erigeron canadensis HOM05D006746 ORTHO05D007812 4.4e-62 242.7 215 60.0
Zm00001eb318540 Zea mays HOM05D006746 ORTHO05D007812 2.7e-59 233.4 247 48.2
unitig_578.g16366 Utricularia gibba HOM05D006746 ORTHO05D007812 5.9e-59 232.3 181 62.4
ClCG09G016590 Citrullus lanatus HOM05D006746 ORTHO05D007812 7.7e-59 231.9 158 72.8
Cpa.g.sc26.211 Carica papaya HOM05D006746 ORTHO05D007812 2.0e-51 207.2 388 37.9
SHI01253 Sapria himalayana HOM05D006746 ORTHO05D007812 2.7e-51 206.8 221 50.7
MD00G1087100 Malus domestica HOM05D006746 ORTHO05D007812 2.2e-45 187.2 228 47.4
AagrBONN_evm.TU.Sc2ySwM_362.1591 Anthoceros agrestis HOM05D006746 ORTHO05D007812 1.9e-44 184.1 348 31.0
Pp3c10_14490 Physcomitrium patens HOM05D006746 ORTHO05D007812 3.0e-42 176.8 344 32.8
Mapoly0002s0194 Marchantia polymorpha HOM05D006746 ORTHO05D007812 5.6e-41 172.6 351 32.5
Lalb_Chr18g0053301 Lupinus albus HOM05D006746 ORTHO05D007812 1.3e-37 161.4 130 60.8
SMO228G0029 Selaginella moellendorffii HOM05D006746 ORTHO05D007812 4.3e-33 146.4 347 30.8
QL10p064396 Quercus lobata HOM05D006746 ORTHO05D007812 1.2e-30 138.3 168 47.6
PGR042G1380 Punica granatum HOM05D006746 ORTHO05D007812 3.7e-29 133.3 346 31.2
CBR_g3607 Chara braunii HOM05D006746 ORTHO05D007812 1.9e-25 120.9 242 31.8
Haze_05918 Corylus avellana HOM05D003322 ORTHO05D007812 6.2e-24 115.9 65 86.2
CDE02G0327 Ceratophyllum demersum HOM05D006746 ORTHO05D007812 1.8e-23 114.4 90 58.9
Lalb_Chr18g0053311 Lupinus albus HOM05D006746 ORTHO05D007812 1.0e-18 98.6 158 38.6
ClCG09G016570 Citrullus lanatus HOM05D006746 ORTHO05D007812 1.1e-12 78.6 117 38.5
Cre03.g182100 Chlamydomonas reinhardtii HOM05D006746 ORTHO05D007812 5.4e-12 76.3 228 27.6
arahy.Tifrunner.gnm1.ann1.KRWA17 Arachis hypogaea HOM05D006746 ORTHO05D007812 6.6e-10 69.3 127 34.6
HPP92_025333 Vanilla planifolia HOM05D006746 ORTHO05D007812 7.3e-09 65.9 50 62.0
Atru.chr3.1993 Acer truncatum HOM05D006746 ORTHO05D007812 1.3e-08 65.1 40 72.5


User provided reference genes

Program Settings