Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33205 Davidia involucrata HOM05D006500 ORTHO05D008028 3.7e-85 318.2 158 100.0
Rhsim09G0010200 Rhododendron simsii HOM05D006500 ORTHO05D008028 9.0e-76 287.0 158 88.6
vmacro00698 Vaccinium macrocarpon HOM05D006500 ORTHO05D008028 1.3e-74 283.1 158 87.3
Actinidia27113 Actinidia chinensis HOM05D006500 ORTHO05D008028 6.5e-74 280.8 158 85.4
CSS0014789 Camellia sinensis var. sinensis HOM05D006500 ORTHO05D008028 7.2e-73 277.3 155 86.5
TAR365G1104 Trochodendron aralioides HOM05D006500 ORTHO05D008028 5.1e-71 271.2 150 87.3
GSVIVG01038143001 Vitis vinifera HOM05D006500 ORTHO05D008028 1.3e-69 266.5 150 85.3
Hma1.2p1_0108F.1_g051720 Hydrangea macrophylla HOM05D006500 ORTHO05D008028 2.8e-69 265.4 151 84.8
Aqoxy2G00124 Aquilegia oxysepala HOM05D006500 ORTHO05D008028 3.1e-68 261.9 148 83.8
Nn1g09644 Nelumbo nucifera HOM05D006500 ORTHO05D008028 3.1e-68 261.9 150 84.0
DCAR_023930 Daucus carota HOM05D006500 ORTHO05D008028 1.5e-67 259.6 153 81.7
Potri.019G112100 Populus trichocarpa HOM05D006500 ORTHO05D008028 2.0e-67 259.2 146 81.5
Manes.11G129200 Manihot esculenta HOM05D006500 ORTHO05D008028 7.7e-67 257.3 149 82.6
Thecc.04G165600 Theobroma cacao HOM05D006500 ORTHO05D008028 1.3e-66 256.5 136 85.3
Sabra19G0108100 Salix brachista HOM05D006500 ORTHO05D008028 1.7e-66 256.1 146 80.8
MSTRG.4301 Avicennia marina HOM05D006500 ORTHO05D008028 2.9e-66 255.4 153 81.0
Gohir.D05G327900 Gossypium hirsutum HOM05D006500 ORTHO05D008028 6.5e-66 254.2 139 84.2
Gorai.009G351800 Gossypium raimondii HOM05D006500 ORTHO05D008028 6.5e-66 254.2 139 84.2
SalBow3G2241 Salvia bowleyana HOM05D006500 ORTHO05D008028 6.5e-66 254.2 147 84.4
Potri.013G126900 Populus trichocarpa HOM05D006500 ORTHO05D008028 1.1e-65 253.4 153 78.4
QL10p055774 Quercus lobata HOM05D006500 ORTHO05D008028 1.1e-65 253.4 158 81.0
Atru.chr4.1419 Acer truncatum HOM05D006500 ORTHO05D008028 1.4e-65 253.1 139 84.2
Duzib268G0518 Durio zibethinus HOM05D006500 ORTHO05D008028 1.4e-65 253.1 135 85.2
Gohir.A05G327700 Gossypium hirsutum HOM05D006500 ORTHO05D008028 2.5e-65 252.3 139 83.5
BcaC07g42119 Brassica carinata HOM05D006500 ORTHO05D008028 3.2e-65 251.9 148 77.7
Carub.0001s0507 Capsella rubella HOM05D006500 ORTHO05D008028 3.2e-65 251.9 153 75.8
COL.COLO4_08138 Corchorus olitorius HOM05D006500 ORTHO05D008028 3.2e-65 251.9 153 78.4
Sp1g04540 Schrenkiella parvula HOM05D006500 ORTHO05D008028 4.2e-65 251.5 148 77.7
SGA_v2.0_scaffold283G46959 Striga asiatica HOM05D006500 ORTHO05D008028 4.2e-65 251.5 161 77.0
TWI38G1400 Tripterygium wilfordii HOM05D006500 ORTHO05D008028 4.2e-65 251.5 147 79.6
CiPaw.02G100400 Carya illinoinensis HOM05D006500 ORTHO05D008028 5.5e-65 251.1 147 81.6
Cc03_g14120 Coffea canephora HOM05D006500 ORTHO05D008028 5.5e-65 251.1 159 78.0
BcaC07g42115 Brassica carinata HOM05D006500 ORTHO05D008028 7.2e-65 250.8 142 80.3
BcaC07g42118 Brassica carinata HOM05D006500 ORTHO05D008028 7.2e-65 250.8 142 80.3
A09p67320 Brassica napus HOM05D006500 ORTHO05D008028 7.2e-65 250.8 142 80.3
C08p51630 Brassica napus HOM05D006500 ORTHO05D008028 7.2e-65 250.8 142 80.3
BolC8t52691H Brassica oleracea HOM05D006500 ORTHO05D008028 7.2e-65 250.8 142 80.3
Cpa.g.sc9.364 Carica papaya HOM05D006500 ORTHO05D008028 7.2e-65 250.8 160 76.9
Duzib151G0460 Durio zibethinus HOM05D006500 ORTHO05D008028 7.2e-65 250.8 136 84.6
Thhalv10008926m.g Eutrema salsugineum HOM05D006500 ORTHO05D008028 7.2e-65 250.8 148 77.0
BraA09t42063Z Brassica rapa HOM05D006500 ORTHO05D008028 9.4e-65 250.4 142 80.3
CARHR005240 Cardamine hirsuta HOM05D006500 ORTHO05D008028 9.4e-65 250.4 148 77.7
MD17G1177800 Malus domestica HOM05D006500 ORTHO05D008028 9.4e-65 250.4 157 77.1
Sed0015541 Sechium edule HOM05D006500 ORTHO05D008028 9.4e-65 250.4 147 79.6
ClCG06G001100 Citrullus lanatus HOM05D006500 ORTHO05D008028 1.6e-64 249.6 147 78.2
AL1G15630 Arabidopsis lyrata HOM05D006500 ORTHO05D008028 2.7e-64 248.8 148 75.7
Eucgr.A00110 Eucalyptus grandis HOM05D006500 ORTHO05D008028 2.7e-64 248.8 153 75.8
Eucgr.A00287 Eucalyptus grandis HOM05D006500 ORTHO05D008028 2.7e-64 248.8 153 75.8
AT1G05720 Arabidopsis thaliana HOM05D006500 ORTHO05D008028 3.6e-64 248.4 148 75.7
Solyc06g053430.4 Solanum lycopersicum HOM05D006500 ORTHO05D008028 3.6e-64 248.4 154 77.3
Sopen06g018490 Solanum pennellii HOM05D006500 ORTHO05D008028 3.6e-64 248.4 154 77.3
PGSC0003DMG400016334 Solanum tuberosum HOM05D006500 ORTHO05D008028 3.6e-64 248.4 154 77.3
THA.LOC104800923 Tarenaya hassleriana HOM05D006500 ORTHO05D008028 3.6e-64 248.4 162 73.5
Ciclev10022516m.g Citrus clementina HOM05D006500 ORTHO05D008028 6.1e-64 247.7 163 73.0
Oeu015723.1 Olea europaea HOM05D006500 ORTHO05D008028 6.1e-64 247.7 139 81.3
Psat7g120240 Pisum sativum HOM05D006500 ORTHO05D008028 6.1e-64 247.7 154 76.0
CAN.G136.13 Capsicum annuum HOM05D006500 ORTHO05D008028 7.9e-64 247.3 154 76.6
CiPaw.01G170700 Carya illinoinensis HOM05D006500 ORTHO05D008028 7.9e-64 247.3 148 79.7
MD04G1049100 Malus domestica HOM05D006500 ORTHO05D008028 7.9e-64 247.3 159 76.1
Nitab4.5_0001586g0010 Nicotiana tabacum HOM05D006500 ORTHO05D008028 1.8e-63 246.1 135 82.2
PSO732G0103 Papaver somniferum HOM05D006500 ORTHO05D008028 1.8e-63 246.1 150 78.0
Sed0014008 Sechium edule HOM05D006500 ORTHO05D008028 1.8e-63 246.1 147 76.9
Lj4g0023361 Lotus japonicus HOM05D006500 ORTHO05D008028 2.3e-63 245.7 156 76.9
HanXRQChr14g0433631 Helianthus annuus HOM05D003327 ORTHO05D004535 3.0e-63 245.4 145 82.1
PSO675G9108 Papaver somniferum HOM05D006500 ORTHO05D008028 3.0e-63 245.4 150 78.0
Migut.G01179 Erythranthe guttata HOM05D006500 ORTHO05D008028 5.1e-63 244.6 144 77.8
Oeu050336.1 Olea europaea HOM05D006500 ORTHO05D008028 5.1e-63 244.6 151 76.2
CsaV3_6G007030 Cucumis sativus L. HOM05D006500 ORTHO05D008028 6.7e-63 244.2 147 76.9
Prupe.1G207200 Prunus persica HOM05D006500 ORTHO05D008028 6.7e-63 244.2 156 75.6
RcHm_v2.0_Chr4g0405941 Rosa chinensis HOM05D006500 ORTHO05D008028 6.7e-63 244.2 158 75.3
MELO3C022425.2 Cucumis melo HOM05D006500 ORTHO05D008028 8.8e-63 243.8 147 76.9
Glyma.02G137600 Glycine max HOM05D006500 ORTHO05D008028 1.1e-62 243.4 136 82.4
Glyma.07G207800 Glycine max HOM05D006500 ORTHO05D008028 1.1e-62 243.4 150 77.3
Lalb_Chr09g0328101 Lupinus albus HOM05D006500 ORTHO05D008028 1.1e-62 243.4 157 73.2
Peaxi162Scf00180g00116 Petunia axillaris HOM05D006500 ORTHO05D008028 1.5e-62 243.0 149 77.2
Phvul.003G296700 Phaseolus vulgaris HOM05D006500 ORTHO05D008028 1.5e-62 243.0 143 81.1
Hund03202 Selenicereus undatus HOM05D006500 ORTHO05D008028 1.5e-62 243.0 152 74.3
Sc25g0002800 Simmondsia chinensis HOM05D006500 ORTHO05D008028 1.5e-62 243.0 153 73.2
VMungo0251G2572 Vigna mungo HOM05D006500 ORTHO05D008028 2.6e-62 242.3 144 79.2
EL10Ac3g06088 Beta vulgaris HOM05D006500 ORTHO05D008028 4.4e-62 241.5 155 72.9
BcaB03g13492 Brassica carinata HOM05D006500 ORTHO05D008028 4.4e-62 241.5 148 75.0
CANSAT56G1821 Cannabis sativa HOM05D006500 ORTHO05D008028 4.4e-62 241.5 153 75.8
BolC8t47013H Brassica oleracea HOM05D006500 ORTHO05D008028 5.7e-62 241.1 152 72.4
Lsat_1_v5_gn_1_74920 Lactuca sativa HOM05D006500 ORTHO05D008028 5.7e-62 241.1 151 76.8
Medtr4g087310 Medicago truncatula HOM05D006500 ORTHO05D008028 5.7e-62 241.1 148 77.7
BcaC07g36846 Brassica carinata HOM05D006500 ORTHO05D008028 7.4e-62 240.7 152 72.4
C08p02210 Brassica napus HOM05D006500 ORTHO05D008028 7.4e-62 240.7 152 72.4
BraA08t35535Z Brassica rapa HOM05D006500 ORTHO05D008028 1.3e-61 240.0 154 70.1
arahy.Tifrunner.gnm1.ann1.A3K5YX Arachis hypogaea HOM05D006500 ORTHO05D008028 1.7e-61 239.6 151 72.8
arahy.Tifrunner.gnm1.ann1.SHKR8E Arachis hypogaea HOM05D006500 ORTHO05D008028 1.7e-61 239.6 151 72.8
AUR62023794 Chenopodium quinoa HOM05D006500 ORTHO05D008028 1.7e-61 239.6 152 73.7
Nitab4.5_0002544g0040 Nicotiana tabacum HOM05D006500 ORTHO05D008028 2.2e-61 239.2 154 73.4
FvH4_4g10450 Fragaria vesca HOM05D006500 ORTHO05D008028 2.8e-61 238.8 135 81.5
FAN12G2511 Fragaria x ananassa HOM05D006500 ORTHO05D008028 2.8e-61 238.8 135 81.5
AUR62002395 Chenopodium quinoa HOM05D006500 ORTHO05D008028 3.7e-61 238.4 152 73.7
FAN17G0772 Fragaria x ananassa HOM05D006500 ORTHO05D008028 4.8e-61 238.0 159 72.3
Ca_18638_v3 Cicer arietinum L. HOM05D006500 ORTHO05D008028 6.3e-61 237.7 141 77.3
PGR083G1262 Punica granatum HOM05D006500 ORTHO05D008028 2.4e-60 235.7 160 73.8
A08p36310 Brassica napus HOM05D006500 ORTHO05D008028 4.1e-60 235.0 154 68.8
HPP92_003580 Vanilla planifolia HOM05D006500 ORTHO05D008028 5.3e-60 234.6 154 71.4
CDE04G3295 Ceratophyllum demersum HOM05D006500 ORTHO05D008028 1.2e-59 233.4 154 69.5
ECA248G2222 Erigeron canadensis HOM05D000003 ORTHO05D008028 1.7e-58 229.6 152 72.4
ATR0743G133 Amborella trichopoda HOM05D006500 ORTHO05D008028 2.5e-57 225.7 149 70.5
Aa31LG1G8630 Aethionema arabicum HOM05D006500 ORTHO05D008028 8.0e-56 220.7 172 62.8
Os01g0894500 Oryza sativa ssp. japonica HOM05D006500 ORTHO05D008028 1.4e-55 219.9 149 68.5
unitig_46.g18636 Utricularia gibba HOM05D006500 ORTHO05D008028 2.3e-55 219.2 156 66.7
Lj3A158T10 Lonicera japonica HOM05D006500 ORTHO05D008028 3.0e-55 218.8 135 83.0
FAN07G0402 Fragaria x ananassa HOM05D006500 ORTHO05D008028 8.8e-55 217.2 182 61.5
FAN22G1805 Fragaria x ananassa HOM05D006500 ORTHO05D008028 8.8e-55 217.2 206 55.8
FAN12G1276 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.5e-54 216.5 187 59.4
Zm00001eb144900 Zea mays HOM05D006500 ORTHO05D008028 3.3e-54 215.3 145 67.6
SEGI_07767 Sequoiadendron giganteum HOM05D006500 ORTHO05D008028 4.5e-51 204.9 132 69.7
Haze_01362 Corylus avellana HOM05D006500 ORTHO05D008028 1.0e-47 193.7 148 69.6
MBI08_g33171_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 2.6e-46 189.1 106 80.2
SMO119G0117 Selaginella moellendorffii HOM05D006500 ORTHO05D008028 9.8e-46 187.2 153 56.9
BcaC07g42121 Brassica carinata HOM05D006500 ORTHO05D008028 1.4e-44 183.3 142 63.4
TPR.G23526 Trifolium pratense HOM05D006500 ORTHO05D008028 4.5e-43 178.3 97 83.5
Pp3c14_2450 Physcomitrium patens HOM05D006500 ORTHO05D008028 1.9e-41 172.9 135 57.0
Nn1g09666 Nelumbo nucifera HOM05D006500 ORTHO05D008028 5.9e-35 151.4 86 81.4
Ciclev10023175m.g Citrus clementina HOM05D006500 ORTHO05D008028 1.9e-25 119.8 75 73.3
SHI33478 Sapria himalayana HOM05D000105 ORTHO05D000023 1.8e-23 113.2 83 62.7
CAN.G701.5 Capsicum annuum HOM05D006500 ORTHO05D008028 7.3e-17 91.3 82 53.7
Cre01.g038950 Chlamydomonas reinhardtii HOM05D006500 ORTHO05D008028 3.1e-15 85.9 150 34.7
CBR_g27901 Chara braunii HOM05D006500 ORTHO05D008028 2.6e-14 82.8 132 35.6
MBI08_g33170_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 1.2e-08 63.9 43 76.7


User provided reference genes

Program Settings