Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 6.6e-69 263.8 127 100.0
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 2.5e-60 235.3 119 91.6
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 9.5e-60 233.4 119 90.8
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 2.8e-59 231.9 119 89.9
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 3.6e-59 231.5 119 86.6
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 6.2e-59 230.7 119 89.1
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 6.2e-59 230.7 119 89.1
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 6.2e-59 230.7 119 89.1
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 8.1e-59 230.3 120 89.2
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 8.1e-59 230.3 119 88.2
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 1.4e-58 229.6 119 89.9
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 1.8e-58 229.2 119 88.2
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.8e-58 229.2 119 88.2
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 2.4e-58 228.8 119 85.7
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.4e-58 228.8 119 88.2
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 3.1e-58 228.4 119 88.2
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.1e-58 228.4 119 88.2
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 5.2e-58 227.6 119 87.4
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 5.2e-58 227.6 119 87.4
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 5.2e-58 227.6 119 88.2
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 6.8e-58 227.3 119 85.7
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 6.8e-58 227.3 117 88.9
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 8.9e-58 226.9 115 93.0
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 1.2e-57 226.5 119 86.6
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 3.4e-57 224.9 117 88.0
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 7.6e-57 223.8 119 86.6
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 1.3e-56 223.0 117 86.3
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 2.2e-56 222.2 119 86.6
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 2.2e-56 222.2 119 84.9
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 2.9e-56 221.9 119 84.9
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 3.8e-56 221.5 119 84.0
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 3.8e-56 221.5 117 87.2
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 4.9e-56 221.1 119 84.9
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 4.9e-56 221.1 119 84.9
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 6.4e-56 220.7 119 87.4
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 6.4e-56 220.7 119 87.4
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 6.4e-56 220.7 119 87.4
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 1.9e-55 219.2 119 84.9
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 1.9e-55 219.2 117 85.5
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 1.9e-55 219.2 119 82.4
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 3.2e-55 218.4 119 84.9
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 4.1e-55 218.0 119 83.2
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 5.4e-55 217.6 119 84.0
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 7.1e-55 217.2 119 84.0
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 7.1e-55 217.2 119 82.4
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 7.1e-55 217.2 119 82.4
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 9.2e-55 216.9 119 84.0
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 1.2e-54 216.5 119 82.4
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 1.6e-54 216.1 143 74.1
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 2.1e-54 215.7 117 85.5
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 2.7e-54 215.3 120 83.3
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 2.7e-54 215.3 117 83.8
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 3.5e-54 214.9 119 80.7
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 6.0e-54 214.2 117 86.3
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 1.0e-53 213.4 117 87.2
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 1.3e-53 213.0 117 80.3
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 1.3e-53 213.0 123 76.4
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 2.3e-53 212.2 119 83.2
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 3.0e-53 211.8 119 82.4
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 3.0e-53 211.8 117 81.2
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 3.0e-53 211.8 120 81.7
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 3.0e-53 211.8 120 81.7
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 3.9e-53 211.5 111 88.3
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 5.1e-53 211.1 119 81.5
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 6.6e-53 210.7 117 82.9
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 1.1e-52 209.9 117 83.8
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 1.1e-52 209.9 111 89.2
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 1.5e-52 209.5 119 80.7
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 1.9e-52 209.1 117 82.9
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 3.3e-52 208.4 119 80.7
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 4.3e-52 208.0 119 79.0
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 4.3e-52 208.0 116 84.5
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 4.3e-52 208.0 119 79.8
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 4.3e-52 208.0 119 79.8
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 5.6e-52 207.6 110 85.5
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 5.6e-52 207.6 119 79.8
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 5.6e-52 207.6 119 79.0
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 5.6e-52 207.6 119 79.0
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 5.6e-52 207.6 110 85.5
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 5.6e-52 207.6 120 80.0
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 5.6e-52 207.6 119 79.0
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 7.3e-52 207.2 119 79.0
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 7.3e-52 207.2 117 82.1
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 7.3e-52 207.2 119 79.8
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 7.3e-52 207.2 117 80.3
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 9.6e-52 206.8 119 79.8
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 9.6e-52 206.8 119 79.8
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 9.6e-52 206.8 119 79.8
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 9.6e-52 206.8 119 79.8
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 9.6e-52 206.8 119 79.8
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 9.6e-52 206.8 119 79.0
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 9.6e-52 206.8 119 79.8
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 1.2e-51 206.5 117 79.5
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 2.1e-51 205.7 117 79.5
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 2.8e-51 205.3 110 89.1
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 3.6e-51 204.9 117 82.9
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 3.6e-51 204.9 117 82.9
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 6.2e-51 204.1 119 78.2
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 6.2e-51 204.1 119 78.2
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 6.2e-51 204.1 119 78.2
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 6.2e-51 204.1 119 78.2
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 6.2e-51 204.1 119 78.2
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 6.2e-51 204.1 119 78.2
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 8.1e-51 203.8 117 81.2
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 8.1e-51 203.8 119 78.2
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 1.1e-50 203.4 119 78.2
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 1.4e-50 203.0 117 81.2
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 6.9e-50 200.7 119 76.5
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 6.9e-50 200.7 119 75.6
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 3.4e-49 198.4 117 80.3
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 4.4e-49 198.0 117 79.5
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 1.3e-48 196.4 117 77.8
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 3.8e-48 194.9 119 74.8
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 6.4e-48 194.1 117 76.9
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 6.4e-48 194.1 117 77.8
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 6.4e-48 194.1 117 77.8
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 9.3e-47 190.3 117 76.9
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 2.7e-46 188.7 119 72.3
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 3.5e-46 188.3 111 78.4
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 3.9e-45 184.9 110 78.2
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 3.9e-45 184.9 107 85.0
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 8.7e-45 183.7 112 77.7
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 7.3e-44 180.6 94 87.2
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 7.3e-44 180.6 110 78.2
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 2.8e-43 178.7 130 68.5
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 4.8e-43 177.9 94 86.2
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 5.3e-42 174.5 210 46.7
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 1.2e-41 173.3 90 84.4
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 3.4e-41 171.8 92 82.6
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 4.5e-41 171.4 90 86.7
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 7.6e-41 170.6 92 84.8
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.9e-40 168.7 90 85.6
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 2.9e-40 168.7 119 68.1
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 3.8e-40 168.3 115 65.2
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.4e-39 166.4 90 85.6
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 3.2e-39 165.2 87 86.2
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 4.2e-39 164.9 90 83.3
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 1.2e-38 163.3 123 65.0
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 3.0e-37 158.7 110 70.9
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 3.0e-37 158.7 110 70.9
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 5.1e-37 157.9 91 82.4
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 5.1e-37 157.9 168 51.8
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 1.1e-36 156.8 133 56.4
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 2.5e-36 155.6 135 63.7
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 2.5e-36 155.6 110 70.0
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 5.6e-36 154.5 119 59.7
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 3.7e-35 151.8 88 77.3
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 1.5e-33 146.4 88 77.3
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.0e-33 146.0 77 88.3
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 3.4e-33 145.2 98 67.3
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 4.5e-33 144.8 117 64.1
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 7.6e-33 144.1 88 76.1
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 1.3e-32 143.3 88 78.4
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 7.1e-31 137.5 82 75.6
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 1.8e-29 132.9 86 68.6
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 4.3e-28 128.3 62 93.5
COL.COLO4_08144 Corchorus olitorius HOM05D004197 ORTHO05D004975 2.1e-27 125.9 62 90.3
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 3.7e-27 125.2 109 62.4
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 8.2e-27 124.0 114 50.0
arahy.Tifrunner.gnm1.ann1.GGUP18 Arachis hypogaea HOM05D004197 ORTHO05D004975 1.1e-26 123.6 62 90.3
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 1.4e-26 123.2 62 88.7
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 6.9e-26 120.9 90 67.8
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.2e-24 115.9 119 52.1
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 9.3e-23 110.5 110 44.5
arahy.Tifrunner.gnm1.ann1.HJ8Q1I Arachis hypogaea HOM05D004197 ORTHO05D004975 9.7e-20 100.5 57 78.9
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 8.2e-19 97.4 82 63.4
MCO09G643 Micromonas commoda HOM05D004197 ORTHO05D004975 1.1e-18 97.1 115 41.7
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.4e-18 96.7 62 72.6
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 6.9e-18 94.4 62 71.0
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.7e-16 89.7 57 73.7
Actinidia27110 Actinidia chinensis HOM05D004197 ORTHO05D004975 6.7e-13 77.8 44 79.5
Thecc.10G088100 Theobroma cacao HOM05D004197 ORTHO05D004975 3.2e-07 58.9 34 79.4


User provided reference genes

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